data_5GL
# 
_chem_comp.id                                    5GL 
_chem_comp.name                                  "4-propan-2-ylsulfanyl-1-propyl-6,7-dihydro-5~{H}-cyclopenta[d]pyrimidin-2-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H20 N2 O S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-09-24 
_chem_comp.pdbx_modified_date                    2016-09-23 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        252.376 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5GL 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5DR3 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5GL C4  C1  C 0 1 N N N -10.451 2.573  0.654  -0.009 -1.293 0.020  C4  5GL 1  
5GL C5  C2  C 0 1 N N N -10.827 3.938  0.799  -1.001 -0.289 0.079  C5  5GL 2  
5GL C6  C3  C 0 1 N N N -12.312 3.440  2.525  0.617  1.326  -0.246 C6  5GL 3  
5GL N1  N1  N 0 1 N N N -11.710 4.322  1.682  -0.655 0.985  -0.056 N1  5GL 4  
5GL C10 C4  C 0 1 N N N -9.493  1.895  -0.290 -0.120 -2.797 0.134  C10 5GL 5  
5GL C11 C5  C 0 1 N N N -9.762  0.406  -0.082 1.209  -3.341 -0.435 C11 5GL 6  
5GL C12 C6  C 0 1 N N N -10.567 0.252  1.202  2.168  -2.154 -0.196 C12 5GL 7  
5GL O   O1  O 0 1 N N N -13.150 3.789  3.357  0.911  2.504  -0.367 O   5GL 8  
5GL N   N2  N 0 1 N N N -11.951 2.086  2.420  1.584  0.393  -0.306 N   5GL 9  
5GL C2  C7  C 0 1 N N N -12.554 1.145  3.373  2.976  0.801  -0.516 C2  5GL 10 
5GL C1  C8  C 0 1 N N N -13.815 0.495  2.838  3.646  1.043  0.838  C1  5GL 11 
5GL C   C9  C 0 1 N N N -14.306 -0.597 3.759  5.099  1.468  0.618  C   5GL 12 
5GL S   S1  S 0 1 N N N -10.053 5.112  -0.237 -2.690 -0.727 0.329  S   5GL 13 
5GL C3  C10 C 0 1 N N N -11.027 1.653  1.477  1.279  -0.931 -0.172 C3  5GL 14 
5GL H2  H2  H 0 1 N N N -8.452  2.144  -0.036 -0.233 -3.091 1.178  H2  5GL 15 
5GL H3  H3  H 0 1 N N N -9.696  2.188  -1.331 -0.961 -3.161 -0.456 H3  5GL 16 
5GL H4  H4  H 0 1 N N N -10.334 0.007  -0.932 1.537  -4.223 0.115  H4  5GL 17 
5GL H5  H5  H 0 1 N N N -8.810  -0.137 0.006  1.117  -3.559 -1.499 H5  5GL 18 
5GL H6  H6  H 0 1 N N N -11.422 -0.424 1.055  2.685  -2.270 0.757  H6  5GL 19 
5GL H7  H7  H 0 1 N N N -9.938  -0.126 2.021  2.888  -2.079 -1.011 H7  5GL 20 
5GL H8  H8  H 0 1 N N N -11.821 0.357  3.600  3.508  0.013  -1.050 H8  5GL 21 
5GL H9  H9  H 0 1 N N N -12.804 1.690  4.295  3.001  1.719  -1.104 H9  5GL 22 
5GL H10 H10 H 0 1 N N N -14.599 1.261  2.741  3.113  1.830  1.371  H10 5GL 23 
5GL H11 H11 H 0 1 N N N -13.602 0.061  1.850  3.621  0.125  1.425  H11 5GL 24 
5GL H12 H12 H 0 1 N N N -15.220 -1.046 3.342  5.577  1.641  1.583  H12 5GL 25 
5GL H13 H13 H 0 1 N N N -13.530 -1.370 3.857  5.632  0.681  0.085  H13 5GL 26 
5GL H14 H14 H 0 1 N N N -14.526 -0.170 4.749  5.124  2.386  0.031  H14 5GL 27 
5GL C7  C11 C 0 1 N N N ?       ?      ?      -3.446 0.917  0.311  C7  5GL 28 
5GL C8  C12 C 0 1 N N N ?       ?      ?      -3.279 1.541  -1.076 C8  5GL 29 
5GL C9  C13 C 0 1 N N N ?       ?      ?      -4.935 0.797  0.640  C9  5GL 30 
5GL H1  H1  H 0 1 N N N ?       ?      ?      -2.960 1.549  1.055  H1  5GL 31 
5GL H15 H15 H 0 1 N N N ?       ?      ?      -3.734 2.531  -1.086 H15 5GL 32 
5GL H16 H16 H 0 1 N N N ?       ?      ?      -2.218 1.627  -1.310 H16 5GL 33 
5GL H17 H17 H 0 1 N N N ?       ?      ?      -3.765 0.909  -1.819 H17 5GL 34 
5GL H18 H18 H 0 1 N N N ?       ?      ?      -5.054 0.353  1.628  H18 5GL 35 
5GL H19 H19 H 0 1 N N N ?       ?      ?      -5.391 1.787  0.630  H19 5GL 36 
5GL H20 H20 H 0 1 N N N ?       ?      ?      -5.422 0.166  -0.103 H20 5GL 37 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5GL C10 C11 SING N N 1  
5GL C10 C4  SING N N 2  
5GL S   C5  SING N N 3  
5GL C11 C12 SING N N 4  
5GL C4  C5  SING N N 5  
5GL C4  C3  DOUB N N 6  
5GL C5  N1  DOUB N N 7  
5GL C12 C3  SING N N 8  
5GL C3  N   SING N N 9  
5GL N1  C6  SING N N 10 
5GL N   C6  SING N N 11 
5GL N   C2  SING N N 12 
5GL C6  O   DOUB N N 13 
5GL C1  C2  SING N N 14 
5GL C1  C   SING N N 15 
5GL C10 H2  SING N N 16 
5GL C10 H3  SING N N 17 
5GL C11 H4  SING N N 18 
5GL C11 H5  SING N N 19 
5GL C12 H6  SING N N 20 
5GL C12 H7  SING N N 21 
5GL C2  H8  SING N N 22 
5GL C2  H9  SING N N 23 
5GL C1  H10 SING N N 24 
5GL C1  H11 SING N N 25 
5GL C   H12 SING N N 26 
5GL C   H13 SING N N 27 
5GL C   H14 SING N N 28 
5GL S   C7  SING N N 29 
5GL C7  C8  SING N N 30 
5GL C7  C9  SING N N 31 
5GL C7  H1  SING N N 32 
5GL C8  H15 SING N N 33 
5GL C8  H16 SING N N 34 
5GL C8  H17 SING N N 35 
5GL C9  H18 SING N N 36 
5GL C9  H19 SING N N 37 
5GL C9  H20 SING N N 38 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5GL InChI            InChI                1.03  "InChI=1S/C13H20N2OS/c1-4-8-15-11-7-5-6-10(11)12(14-13(15)16)17-9(2)3/h9H,4-8H2,1-3H3" 
5GL InChIKey         InChI                1.03  KUWKRQXLULNLGL-UHFFFAOYSA-N                                                            
5GL SMILES_CANONICAL CACTVS               3.385 "CCCN1C(=O)N=C(SC(C)C)C2=C1CCC2"                                                       
5GL SMILES           CACTVS               3.385 "CCCN1C(=O)N=C(SC(C)C)C2=C1CCC2"                                                       
5GL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "CCCN1C2=C(CCC2)C(=NC1=O)SC(C)C"                                                       
5GL SMILES           "OpenEye OEToolkits" 2.0.4 "CCCN1C2=C(CCC2)C(=NC1=O)SC(C)C"                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
5GL "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "4-propan-2-ylsulfanyl-1-propyl-6,7-dihydro-5~{H}-cyclopenta[d]pyrimidin-2-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5GL "Create component"   2015-09-24 EBI  
5GL "Modify value order" 2015-10-20 EBI  
5GL "Initial release"    2016-09-28 RCSB 
# 
