data_AML
# 
_chem_comp.id                                    AML 
_chem_comp.name                                  AMYLAMINE 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C5 H13 N" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2001-07-05 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        87.163 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     AML 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1JIR 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
AML C1   C1   C 0 1 N N N N N N 13.507 4.235 80.725 -0.243 0.020  3.168  C1   AML 1  
AML C2   C2   C 0 1 N N N N N N 14.327 3.236 79.910 0.563  -0.019 1.869  C2   AML 2  
AML C3   C3   C 0 1 N N N N N N 14.209 3.419 78.405 -0.392 0.009  0.674  C3   AML 3  
AML C4   C4   C 0 1 N N N N N N 12.755 3.485 77.973 0.414  -0.030 -0.624 C4   AML 4  
AML C5   C5   C 0 1 N N N N N N 12.622 3.545 76.464 -0.540 -0.001 -1.819 C5   AML 5  
AML N1   N1   N 0 1 N N N N N N 11.197 3.669 76.088 0.234  -0.040 -3.067 N1   AML 6  
AML HC11 1HC1 H 0 0 N N N N N N 13.593 4.100 81.828 0.436  -0.000 4.019  HC11 AML 7  
AML HC12 2HC1 H 0 0 N N N N N N 13.765 5.280 80.436 -0.836 0.935  3.199  HC12 AML 8  
AML HC13 3HC1 H 0 0 N N N N N N 12.437 4.211 80.410 -0.906 -0.843 3.211  HC13 AML 9  
AML HC21 1HC2 H 0 0 N N N N N N 15.396 3.259 80.224 1.226  0.844  1.826  HC21 AML 10 
AML HC22 2HC2 H 0 0 N N N N N N 14.068 2.190 80.198 1.155  -0.934 1.838  HC22 AML 11 
AML HC31 1HC3 H 0 0 N N N N N N 14.781 4.308 78.053 -1.054 -0.854 0.717  HC31 AML 12 
AML HC32 2HC3 H 0 0 N N N N N N 14.766 2.627 77.850 -0.984 0.924  0.705  HC32 AML 13 
AML HC41 1HC4 H 0 0 N N N N N N 12.164 2.641 78.400 1.077  0.833  -0.668 HC41 AML 14 
AML HC42 2HC4 H 0 0 N N N N N N 12.223 4.334 78.462 1.007  -0.945 -0.656 HC42 AML 15 
AML HC51 1HC5 H 0 0 N N N N N N 13.243 4.357 76.021 -1.203 -0.865 -1.776 HC51 AML 16 
AML HC52 2HC5 H 0 0 N N N N N N 13.112 2.676 75.966 -1.133 0.913  -1.788 HC52 AML 17 
AML HN11 1HN1 H 0 0 N N N N N N 11.107 3.709 75.072 -0.432 -0.018 -3.823 HN11 AML 18 
AML HN12 2HN1 H 0 0 N N N N N N 10.748 4.463 76.543 0.752  0.824  -3.113 HN12 AML 19 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
AML C1 C2   SING N N 1  
AML C1 HC11 SING N N 2  
AML C1 HC12 SING N N 3  
AML C1 HC13 SING N N 4  
AML C2 C3   SING N N 5  
AML C2 HC21 SING N N 6  
AML C2 HC22 SING N N 7  
AML C3 C4   SING N N 8  
AML C3 HC31 SING N N 9  
AML C3 HC32 SING N N 10 
AML C4 C5   SING N N 11 
AML C4 HC41 SING N N 12 
AML C4 HC42 SING N N 13 
AML C5 N1   SING N N 14 
AML C5 HC51 SING N N 15 
AML C5 HC52 SING N N 16 
AML N1 HN11 SING N N 17 
AML N1 HN12 SING N N 18 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
AML SMILES           ACDLabs              10.04 NCCCCC                                  
AML SMILES_CANONICAL CACTVS               3.341 CCCCCN                                  
AML SMILES           CACTVS               3.341 CCCCCN                                  
AML SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 CCCCCN                                  
AML SMILES           "OpenEye OEToolkits" 1.5.0 CCCCCN                                  
AML InChI            InChI                1.03  InChI=1S/C5H13N/c1-2-3-4-5-6/h2-6H2,1H3 
AML InChIKey         InChI                1.03  DPBLXKKOBLCELK-UHFFFAOYSA-N             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
AML "SYSTEMATIC NAME" ACDLabs              10.04 pentan-1-amine 
AML "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 pentan-1-amine 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
AML "Create component"  2001-07-05 RCSB 
AML "Modify descriptor" 2011-06-04 RCSB 
AML "Modify PCM"        2024-09-27 PDBE 
# 
loop_
_pdbx_chem_comp_pcm.pcm_id 
_pdbx_chem_comp_pcm.comp_id 
_pdbx_chem_comp_pcm.modified_residue_id 
_pdbx_chem_comp_pcm.type 
_pdbx_chem_comp_pcm.category 
_pdbx_chem_comp_pcm.position 
_pdbx_chem_comp_pcm.polypeptide_position 
_pdbx_chem_comp_pcm.comp_id_linking_atom 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 
1 AML TPO None Crosslinker "Amino-acid backbone"   C-terminal     N1 C   ? ? 
2 AML 56A None Crosslinker "Amino-acid side chain" "Any position" C1 NE2 ? ? 
# 
