data_FDL
# 
_chem_comp.id                                    FDL 
_chem_comp.name                                  "N~6~-acetyl-N-(4-methyl-2-oxo-2H-chromen-7-yl)-L-lysinamide" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C18 H23 N3 O4" 
_chem_comp.mon_nstd_parent_comp_id               LYS 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-10-11 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        345.393 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     FDL 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4HD8 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              N 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
FDL CAL CAL C 0 1 N N N N N N 19.990 31.216 23.869 -6.962 1.333  0.727  CAL FDL 1  
FDL CAD CAD C 0 1 N N N N N N 19.078 31.989 23.120 -6.123 0.133  0.370  CAD FDL 2  
FDL CAC CAC C 0 1 N N N N N N 18.708 33.258 23.553 -6.673 -1.108 0.307  CAC FDL 3  
FDL CAB CAB C 0 1 N N N N N N 17.807 34.030 22.760 -5.867 -2.215 -0.031 CAB FDL 4  
FDL OAK OAK O 0 1 N N N N N N 17.482 35.165 23.161 -6.372 -3.322 -0.083 OAK FDL 5  
FDL OAA OAA O 0 1 N N N N N N 17.270 33.531 21.557 -4.559 -2.080 -0.296 OAA FDL 6  
FDL CAF CAF C 0 1 Y N N N N N 17.602 32.271 21.124 -3.951 -0.875 -0.252 CAF FDL 7  
FDL CAG CAG C 0 1 Y N N N N N 17.028 31.841 19.923 -2.598 -0.753 -0.529 CAG FDL 8  
FDL CAE CAE C 0 1 Y N N N N N 18.513 31.520 21.907 -4.696 0.274  0.074  CAE FDL 9  
FDL CAH CAH C 0 1 Y N N N N N 18.864 30.282 21.441 -4.071 1.525  0.121  CAH FDL 10 
FDL CAI CAI C 0 1 Y N N N N N 18.263 29.889 20.238 -2.737 1.628  -0.149 CAI FDL 11 
FDL CAJ CAJ C 0 1 Y N N N N N 17.371 30.595 19.458 -1.994 0.494  -0.477 CAJ FDL 12 
FDL NAM NAM N 0 1 N N N N N N 16.853 30.078 18.314 -0.632 0.615  -0.756 NAM FDL 13 
FDL C   C   C 0 1 N N N N N N 17.350 28.909 17.843 0.107  1.540  -0.112 C   FDL 14 
FDL O   O   O 0 1 N N N N N N 18.270 28.285 18.383 -0.387 2.201  0.777  O   FDL 15 
FDL CA  CA  C 0 1 N N S N N N 16.677 28.337 16.592 1.549  1.753  -0.496 CA  FDL 16 
FDL N   N   N 0 1 N N N N N N 17.684 28.060 15.594 1.990  3.073  -0.028 N   FDL 17 
FDL CB  CB  C 0 1 N N N N N N 15.828 27.051 16.917 2.414  0.668  0.148  CB  FDL 18 
FDL CAS CAS C 0 1 N N N N N N 14.647 27.468 17.830 3.857  0.809  -0.341 CAS FDL 19 
FDL CAT CAT C 0 1 N N N N N N 13.787 26.235 17.977 4.722  -0.276 0.303  CAT FDL 20 
FDL CAU CAU C 0 1 N N N N N N 12.833 26.404 19.129 6.165  -0.135 -0.185 CAU FDL 21 
FDL NAV NAV N 0 1 N N N N N N 11.953 25.189 19.253 6.993  -1.174 0.431  NAV FDL 22 
FDL CAW CAW C 0 1 N N N N N N 10.651 25.342 19.585 8.308  -1.245 0.146  CAW FDL 23 
FDL OAY OAY O 0 1 N N N N N N 10.141 26.436 19.830 8.806  -0.449 -0.622 OAY FDL 24 
FDL CAX CAX C 0 1 N N N N N N 9.775  24.084 19.635 9.160  -2.314 0.780  CAX FDL 25 
FDL H1  H1  H 0 1 N N N N N N 20.295 31.775 24.766 -7.990 1.018  0.905  H1  FDL 26 
FDL H2  H2  H 0 1 N N N N N N 19.510 30.273 24.170 -6.563 1.799  1.629  H2  FDL 27 
FDL H3  H3  H 0 1 N N N N N N 20.876 30.997 23.255 -6.938 2.051  -0.093 H3  FDL 28 
FDL H4  H4  H 0 1 N N N N N N 19.098 33.655 24.479 -7.723 -1.246 0.516  H4  FDL 29 
FDL H5  H5  H 0 1 N N N N N N 16.337 32.468 19.379 -2.016 -1.627 -0.784 H5  FDL 30 
FDL H6  H6  H 0 1 N N N N N N 19.561 29.647 21.968 -4.642 2.407  0.370  H6  FDL 31 
FDL H7  H7  H 0 1 N N N N N N 18.533 28.908 19.875 -2.255 2.593  -0.112 H7  FDL 32 
FDL H8  H8  H 0 1 N N N N N N 16.118 30.551 17.828 -0.218 0.035  -1.413 H8  FDL 33 
FDL H9  H9  H 0 1 N N N N N N 15.985 29.098 16.202 1.647  1.700  -1.580 H9  FDL 34 
FDL H10 H10 H 0 1 N N N N N N 18.207 28.892 15.407 1.477  3.810  -0.488 H10 FDL 35 
FDL H11 H11 H 0 1 N N N N N N 18.300 27.348 15.931 1.909  3.147  0.975  H11 FDL 36 
FDL H13 H13 H 0 1 N N N N N N 15.441 26.615 15.984 2.385  0.776  1.232  H13 FDL 37 
FDL H14 H14 H 0 1 N N N N N N 16.456 26.311 17.435 2.031  -0.314 -0.129 H14 FDL 38 
FDL H15 H15 H 0 1 N N N N N N 15.019 27.795 18.812 3.885  0.700  -1.425 H15 FDL 39 
FDL H16 H16 H 0 1 N N N N N N 14.072 28.283 17.365 4.240  1.791  -0.064 H16 FDL 40 
FDL H17 H17 H 0 1 N N N N N N 13.215 26.078 17.051 4.693  -0.168 1.388  H17 FDL 41 
FDL H18 H18 H 0 1 N N N N N N 14.431 25.363 18.163 4.339  -1.258 0.026  H18 FDL 42 
FDL H19 H19 H 0 1 N N N N N N 13.405 26.535 20.059 6.193  -0.244 -1.270 H19 FDL 43 
FDL H20 H20 H 0 1 N N N N N N 12.206 27.291 18.955 6.548  0.847  0.091  H20 FDL 44 
FDL H21 H21 H 0 1 N N N N N N 12.328 24.276 19.091 6.595  -1.811 1.045  H21 FDL 45 
FDL H22 H22 H 0 1 N N N N N N 8.745  24.364 19.902 9.161  -3.202 0.147  H22 FDL 46 
FDL H23 H23 H 0 1 N N N N N N 9.778  23.596 18.649 10.181 -1.947 0.892  H23 FDL 47 
FDL H24 H24 H 0 1 N N N N N N 10.173 23.390 20.390 8.756  -2.567 1.760  H24 FDL 48 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
FDL N   CA  SING N N 1  
FDL CA  CB  SING N N 2  
FDL CA  C   SING N N 3  
FDL CB  CAS SING N N 4  
FDL CAS CAT SING N N 5  
FDL C   NAM SING N N 6  
FDL C   O   DOUB N N 7  
FDL CAT CAU SING N N 8  
FDL NAM CAJ SING N N 9  
FDL CAU NAV SING N N 10 
FDL NAV CAW SING N N 11 
FDL CAJ CAG DOUB Y N 12 
FDL CAJ CAI SING Y N 13 
FDL CAW CAX SING N N 14 
FDL CAW OAY DOUB N N 15 
FDL CAG CAF SING Y N 16 
FDL CAI CAH DOUB Y N 17 
FDL CAF OAA SING N N 18 
FDL CAF CAE DOUB Y N 19 
FDL CAH CAE SING Y N 20 
FDL OAA CAB SING N N 21 
FDL CAE CAD SING N N 22 
FDL CAB OAK DOUB N N 23 
FDL CAB CAC SING N N 24 
FDL CAD CAC DOUB N N 25 
FDL CAD CAL SING N N 26 
FDL CAL H1  SING N N 27 
FDL CAL H2  SING N N 28 
FDL CAL H3  SING N N 29 
FDL CAC H4  SING N N 30 
FDL CAG H5  SING N N 31 
FDL CAH H6  SING N N 32 
FDL CAI H7  SING N N 33 
FDL NAM H8  SING N N 34 
FDL CA  H9  SING N N 35 
FDL N   H10 SING N N 36 
FDL N   H11 SING N N 37 
FDL CB  H13 SING N N 38 
FDL CB  H14 SING N N 39 
FDL CAS H15 SING N N 40 
FDL CAS H16 SING N N 41 
FDL CAT H17 SING N N 42 
FDL CAT H18 SING N N 43 
FDL CAU H19 SING N N 44 
FDL CAU H20 SING N N 45 
FDL NAV H21 SING N N 46 
FDL CAX H22 SING N N 47 
FDL CAX H23 SING N N 48 
FDL CAX H24 SING N N 49 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
FDL SMILES           ACDLabs              12.01 "O=C(NCCCCC(N)C(=O)Nc2ccc1c(OC(=O)C=C1C)c2)C"                                                                                                               
FDL InChI            InChI                1.03  "InChI=1S/C18H23N3O4/c1-11-9-17(23)25-16-10-13(6-7-14(11)16)21-18(24)15(19)5-3-4-8-20-12(2)22/h6-7,9-10,15H,3-5,8,19H2,1-2H3,(H,20,22)(H,21,24)/t15-/m0/s1" 
FDL InChIKey         InChI                1.03  CDFJPCDMYIJWOC-HNNXBMFYSA-N                                                                                                                                 
FDL SMILES_CANONICAL CACTVS               3.370 "CC(=O)NCCCC[C@H](N)C(=O)Nc1ccc2C(=CC(=O)Oc2c1)C"                                                                                                           
FDL SMILES           CACTVS               3.370 "CC(=O)NCCCC[CH](N)C(=O)Nc1ccc2C(=CC(=O)Oc2c1)C"                                                                                                            
FDL SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC1=CC(=O)Oc2c1ccc(c2)NC(=O)[C@H](CCCCNC(=O)C)N"                                                                                                           
FDL SMILES           "OpenEye OEToolkits" 1.7.6 "CC1=CC(=O)Oc2c1ccc(c2)NC(=O)C(CCCCNC(=O)C)N"                                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
FDL "SYSTEMATIC NAME" ACDLabs              12.01 "N~6~-acetyl-N-(4-methyl-2-oxo-2H-chromen-7-yl)-L-lysinamide"                   
FDL "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S)-6-acetamido-2-azanyl-N-(4-methyl-2-oxidanylidene-chromen-7-yl)hexanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
FDL "Create component" 2012-10-11 RCSB 
FDL "Initial release"  2012-11-30 RCSB 
FDL "Modify PCM"       2024-09-27 PDBE 
# 
