data_PQL
# 
_chem_comp.id                                    PQL 
_chem_comp.name                                  "(8~{S})-~{N}-[(1~{S})-1-cyano-2-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]ethyl]-7-[(2~{S})-3,3-dimethyl-2-[2,2,2-tris(fluoranyl)ethanoylamino]butanoyl]-1,4-dithia-7-azaspiro[4.4]nonane-8-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H30 F3 N5 O4 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-03-06 
_chem_comp.pdbx_modified_date                    2023-10-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        549.630 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     PQL 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8IGX 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
PQL N1  N1  N 0 1 N N N -18.016 18.218 -28.000 3.177  -0.551 -0.140 N1  PQL 1  
PQL N3  N2  N 0 1 N N N -17.738 20.488 -30.692 5.153  -1.709 -2.639 N3  PQL 2  
PQL C4  C1  C 0 1 N N S -17.371 20.603 -26.064 4.715  1.832  0.666  C4  PQL 3  
PQL C5  C2  C 0 1 N N N -18.567 21.544 -25.968 4.198  2.981  -0.230 C5  PQL 4  
PQL C6  C3  C 0 1 N N N -18.379 22.244 -24.633 4.578  4.226  0.602  C6  PQL 5  
PQL C7  C4  C 0 1 N N N -16.328 21.289 -25.205 5.812  2.470  1.490  C7  PQL 6  
PQL C8  C5  C 0 1 N N N -19.155 17.821 -27.413 1.890  -0.661 -0.525 C8  PQL 7  
PQL C10 C6  C 0 1 N N N -21.293 15.402 -26.123 -1.212 -2.170 -0.399 C10 PQL 8  
PQL C13 C7  C 0 1 N N N -19.407 16.397 -24.775 -0.979 0.310  -0.068 C13 PQL 9  
PQL C15 C8  C 0 1 N N N -20.771 17.444 -22.863 -2.254 0.887  -2.116 C15 PQL 10 
PQL C17 C9  C 0 1 N N N -21.744 18.111 -23.839 -1.393 2.138  -2.301 C17 PQL 11 
PQL C20 C10 C 0 1 N N N -18.561 13.704 -21.070 -4.962 2.928  0.871  C20 PQL 12 
PQL C21 C11 C 0 1 N N N -22.376 12.791 -28.887 -1.422 -5.897 0.860  C21 PQL 13 
PQL C22 C12 C 0 1 N N N -20.954 12.605 -28.949 -0.886 -5.319 2.191  C22 PQL 14 
PQL C1  C13 C 0 1 N N S -17.801 19.602 -28.399 4.156  0.082  -1.027 C1  PQL 15 
PQL C11 C14 C 0 1 N N N -21.139 14.717 -27.468 -0.470 -3.296 0.329  C11 PQL 16 
PQL C12 C15 C 0 1 N N N -20.346 15.766 -28.234 0.997  -2.846 0.297  C12 PQL 17 
PQL C14 C16 C 0 1 N N S -20.188 16.161 -23.480 -2.358 0.555  -0.626 C14 PQL 18 
PQL C16 C17 C 0 1 N N N -21.524 17.103 -21.572 -3.653 1.142  -2.680 C16 PQL 19 
PQL C18 C18 C 0 1 N N N -19.658 18.442 -22.523 -1.612 -0.288 -2.857 C18 PQL 20 
PQL C19 C19 C 0 1 N N N -19.575 14.274 -22.062 -4.322 1.774  0.142  C19 PQL 21 
PQL C2  C20 C 0 1 N N N -17.268 19.668 -29.819 4.719  -0.929 -1.937 C2  PQL 22 
PQL C3  C21 C 0 1 N N N -16.812 20.293 -27.457 5.280  0.697  -0.191 C3  PQL 23 
PQL C9  C22 C 0 1 N N S -19.333 16.316 -27.216 0.882  -1.307 0.391  C9  PQL 24 
PQL F1  F1  F 0 1 N N N -18.544 14.393 -19.941 -4.563 2.911  2.212  F1  PQL 25 
PQL F2  F2  F 0 1 N N N -17.325 13.722 -21.551 -4.561 4.132  0.281  F2  PQL 26 
PQL F3  F3  F 0 1 N N N -18.844 12.448 -20.764 -6.354 2.813  0.796  F3  PQL 27 
PQL N2  N3  N 0 1 N N N -16.926 22.248 -24.483 5.714  3.809  1.432  N2  PQL 28 
PQL N4  N4  N 0 1 N N N -19.983 16.034 -25.934 -0.480 -0.941 -0.029 N4  PQL 29 
PQL N5  N5  N 0 1 N N N -19.313 15.490 -22.535 -2.979 1.676  0.082  N5  PQL 30 
PQL O1  O1  O 0 1 N N N -15.119 20.992 -25.184 6.655  1.861  2.113  O1  PQL 31 
PQL O2  O2  O 0 1 N N N -20.039 18.604 -27.060 1.544  -0.242 -1.609 O2  PQL 32 
PQL O3  O3  O 0 1 N N N -18.279 16.900 -24.760 -0.319 1.240  0.345  O3  PQL 33 
PQL O4  O4  O 0 1 N N N -20.556 13.616 -22.352 -5.016 0.934  -0.389 O4  PQL 34 
PQL S1  S1  S 0 1 N N N -20.274 13.101 -27.359 -1.068 -3.504 2.031  S1  PQL 35 
PQL S2  S2  S 0 1 N N N -22.794 14.427 -28.237 -0.701 -4.898 -0.485 S2  PQL 36 
PQL H1  H1  H 0 1 N N N -17.295 17.546 -28.168 3.454  -0.886 0.727  H1  PQL 37 
PQL H3  H3  H 0 1 N N N -17.643 19.651 -25.585 3.918  1.464  1.311  H3  PQL 38 
PQL H4  H4  H 0 1 N N N -18.560 22.270 -26.794 4.708  2.985  -1.193 H4  PQL 39 
PQL H5  H5  H 0 1 N N N -19.511 20.979 -25.984 3.118  2.916  -0.363 H5  PQL 40 
PQL H6  H6  H 0 1 N N N -18.779 23.268 -24.661 4.872  5.044  -0.055 H6  PQL 41 
PQL H7  H7  H 0 1 N N N -18.862 21.684 -23.819 3.742  4.528  1.232  H7  PQL 42 
PQL H8  H8  H 0 1 N N N -22.096 16.153 -26.150 -1.173 -2.325 -1.477 H8  PQL 43 
PQL H9  H9  H 0 1 N N N -21.500 14.672 -25.327 -2.246 -2.114 -0.061 H9  PQL 44 
PQL H10 H10 H 0 1 N N N -22.152 19.026 -23.384 -1.319 2.375  -3.362 H10 PQL 45 
PQL H11 H11 H 0 1 N N N -21.213 18.369 -24.767 -1.850 2.975  -1.773 H11 PQL 46 
PQL H12 H12 H 0 1 N N N -22.567 17.418 -24.068 -0.396 1.956  -1.898 H12 PQL 47 
PQL H13 H13 H 0 1 N N N -22.796 12.689 -29.899 -1.113 -6.938 0.756  H13 PQL 48 
PQL H14 H14 H 0 1 N N N -22.810 12.022 -28.231 -2.509 -5.828 0.833  H14 PQL 49 
PQL H15 H15 H 0 1 N N N -20.722 11.548 -29.143 -1.478 -5.687 3.029  H15 PQL 50 
PQL H16 H16 H 0 1 N N N -20.528 13.227 -29.750 0.163  -5.584 2.322  H16 PQL 51 
PQL H17 H17 H 0 1 N N N -18.756 20.146 -28.358 3.667  0.863  -1.610 H17 PQL 52 
PQL H18 H18 H 0 1 N N N -19.826 15.310 -29.090 1.542  -3.246 1.152  H18 PQL 53 
PQL H19 H19 H 0 1 N N N -21.009 16.567 -28.592 1.471  -3.142 -0.639 H19 PQL 54 
PQL H20 H20 H 0 1 N N N -21.030 15.493 -23.715 -2.966 -0.340 -0.495 H20 PQL 55 
PQL H21 H21 H 0 1 N N N -20.835 16.623 -20.861 -4.266 0.251  -2.549 H21 PQL 56 
PQL H22 H22 H 0 1 N N N -21.925 18.026 -21.127 -4.110 1.979  -2.152 H22 PQL 57 
PQL H23 H23 H 0 1 N N N -22.352 16.416 -21.801 -3.579 1.379  -3.742 H23 PQL 58 
PQL H24 H24 H 0 1 N N N -18.950 17.977 -21.822 -1.466 -0.022 -3.903 H24 PQL 59 
PQL H25 H25 H 0 1 N N N -19.128 18.728 -23.444 -0.648 -0.521 -2.403 H25 PQL 60 
PQL H26 H26 H 0 1 N N N -20.098 19.338 -22.060 -2.264 -1.159 -2.791 H26 PQL 61 
PQL H28 H28 H 0 1 N N N -15.936 19.638 -27.338 6.051  1.091  -0.853 H28 PQL 62 
PQL H29 H29 H 0 1 N N N -16.501 21.241 -27.921 5.711  -0.066 0.456  H29 PQL 63 
PQL H30 H30 H 0 1 N N N -18.369 15.794 -27.307 1.055  -0.984 1.417  H30 PQL 64 
PQL H31 H31 H 0 1 N N N -16.431 22.896 -23.904 6.318  4.421  1.882  H31 PQL 65 
PQL H32 H32 H 0 1 N N N -18.484 15.958 -22.229 -2.424 2.349  0.508  H32 PQL 66 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PQL N3  C2  TRIP N N 1  
PQL C2  C1  SING N N 2  
PQL C22 C21 SING N N 3  
PQL C22 S1  SING N N 4  
PQL C21 S2  SING N N 5  
PQL C1  N1  SING N N 6  
PQL C1  C3  SING N N 7  
PQL S2  C11 SING N N 8  
PQL C12 C11 SING N N 9  
PQL C12 C9  SING N N 10 
PQL N1  C8  SING N N 11 
PQL C11 S1  SING N N 12 
PQL C11 C10 SING N N 13 
PQL C3  C4  SING N N 14 
PQL C8  C9  SING N N 15 
PQL C8  O2  DOUB N N 16 
PQL C9  N4  SING N N 17 
PQL C10 N4  SING N N 18 
PQL C4  C5  SING N N 19 
PQL C4  C7  SING N N 20 
PQL C5  C6  SING N N 21 
PQL N4  C13 SING N N 22 
PQL C7  O1  DOUB N N 23 
PQL C7  N2  SING N N 24 
PQL C13 O3  DOUB N N 25 
PQL C13 C14 SING N N 26 
PQL C6  N2  SING N N 27 
PQL C17 C15 SING N N 28 
PQL C14 C15 SING N N 29 
PQL C14 N5  SING N N 30 
PQL C15 C18 SING N N 31 
PQL C15 C16 SING N N 32 
PQL N5  C19 SING N N 33 
PQL O4  C19 DOUB N N 34 
PQL C19 C20 SING N N 35 
PQL F2  C20 SING N N 36 
PQL C20 F3  SING N N 37 
PQL C20 F1  SING N N 38 
PQL N1  H1  SING N N 39 
PQL C4  H3  SING N N 40 
PQL C5  H4  SING N N 41 
PQL C5  H5  SING N N 42 
PQL C6  H6  SING N N 43 
PQL C6  H7  SING N N 44 
PQL C10 H8  SING N N 45 
PQL C10 H9  SING N N 46 
PQL C17 H10 SING N N 47 
PQL C17 H11 SING N N 48 
PQL C17 H12 SING N N 49 
PQL C21 H13 SING N N 50 
PQL C21 H14 SING N N 51 
PQL C22 H15 SING N N 52 
PQL C22 H16 SING N N 53 
PQL C1  H17 SING N N 54 
PQL C12 H18 SING N N 55 
PQL C12 H19 SING N N 56 
PQL C14 H20 SING N N 57 
PQL C16 H21 SING N N 58 
PQL C16 H22 SING N N 59 
PQL C16 H23 SING N N 60 
PQL C18 H24 SING N N 61 
PQL C18 H25 SING N N 62 
PQL C18 H26 SING N N 63 
PQL C3  H28 SING N N 64 
PQL C3  H29 SING N N 65 
PQL C9  H30 SING N N 66 
PQL N2  H31 SING N N 67 
PQL N5  H32 SING N N 68 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PQL InChI            InChI                1.06  "InChI=1S/C22H30F3N5O4S2/c1-20(2,3)15(29-19(34)22(23,24)25)18(33)30-11-21(35-6-7-36-21)9-14(30)17(32)28-13(10-26)8-12-4-5-27-16(12)31/h12-15H,4-9,11H2,1-3H3,(H,27,31)(H,28,32)(H,29,34)/t12-,13-,14-,15+/m0/s1" 
PQL InChIKey         InChI                1.06  LQBRGTAIBBFUJJ-ZQDZILKHSA-N                                                                                                                                                                                      
PQL SMILES_CANONICAL CACTVS               3.385 "CC(C)(C)[C@H](NC(=O)C(F)(F)F)C(=O)N1CC2(C[C@H]1C(=O)N[C@@H](C[C@@H]3CCNC3=O)C#N)SCCS2"                                                                                                                          
PQL SMILES           CACTVS               3.385 "CC(C)(C)[CH](NC(=O)C(F)(F)F)C(=O)N1CC2(C[CH]1C(=O)N[CH](C[CH]3CCNC3=O)C#N)SCCS2"                                                                                                                                
PQL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(C)[C@@H](C(=O)N1CC2(C[C@H]1C(=O)N[C@@H](C[C@@H]3CCNC3=O)C#N)SCCS2)NC(=O)C(F)(F)F"                                                                                                                         
PQL SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)(C)C(C(=O)N1CC2(CC1C(=O)NC(CC3CCNC3=O)C#N)SCCS2)NC(=O)C(F)(F)F"                                                                                                                                            
# 
_pdbx_chem_comp_identifier.comp_id           PQL 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(8~{S})-~{N}-[(1~{S})-1-cyano-2-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]ethyl]-7-[(2~{S})-3,3-dimethyl-2-[2,2,2-tris(fluoranyl)ethanoylamino]butanoyl]-1,4-dithia-7-azaspiro[4.4]nonane-8-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
PQL "Create component" 2023-03-06 PDBJ 
PQL "Initial release"  2023-10-18 RCSB 
# 
