data_VVL
# 
_chem_comp.id                                    VVL 
_chem_comp.name                                  "6-benzyl-1,2,4-triazine-3,5(2H,4H)-dithione" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C10 H9 N3 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-05-09 
_chem_comp.pdbx_modified_date                    2023-06-09 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        235.329 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VVL 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7FYG 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VVL C01 C1  C 0 1 N N N 3.326 6.440 18.286 -0.142 0.519  -0.001 C01 VVL 1  
VVL C02 C2  C 0 1 N N N 3.509 5.036 18.029 -1.463 1.149  -0.001 C02 VVL 2  
VVL C07 C3  C 0 1 Y N N 3.451 7.051 20.625 2.318  0.466  -0.001 C07 VVL 3  
VVL C10 C4  C 0 1 Y N N 3.417 6.159 21.663 2.874  0.056  -1.198 C10 VVL 4  
VVL C11 C5  C 0 1 Y N N 4.444 8.060 20.730 2.877  0.059  1.196  C11 VVL 5  
VVL C13 C6  C 0 1 Y N N 4.246 6.284 22.785 3.989  -0.761 -1.198 C13 VVL 6  
VVL C15 C7  C 0 1 Y N N 5.237 7.258 22.893 4.548  -1.168 -0.001 C15 VVL 7  
VVL C03 C8  C 0 1 N N N 2.493 6.932 19.417 1.106  1.363  -0.000 C03 VVL 8  
VVL N04 N1  N 0 1 N N N 3.950 7.343 17.557 -0.061 -0.783 0.003  N04 VVL 9  
VVL N05 N2  N 0 1 N N N 4.442 4.663 17.087 -2.564 0.370  -0.002 N05 VVL 10 
VVL S06 S1  S 0 1 N N N 2.669 3.871 18.864 -1.610 2.855  0.000  S06 VVL 11 
VVL N08 N3  N 0 1 N N N 4.835 6.919 16.596 -1.229 -1.554 0.008  N08 VVL 12 
VVL C09 C9  C 0 1 N N N 5.140 5.571 16.374 -2.441 -0.971 -0.002 C09 VVL 13 
VVL S12 S2  S 0 1 N N N 6.298 5.197 15.245 -3.847 -1.947 -0.002 S12 VVL 14 
VVL C14 C10 C 0 1 Y N N 5.326 8.147 21.824 3.991  -0.758 1.196  C14 VVL 15 
VVL H20 H1  H 0 1 N N N 2.727 5.330 21.615 2.437  0.374  -2.133 H20 VVL 16 
VVL H21 H2  H 0 1 N N N 4.526 8.790 19.939 2.442  0.380  2.132  H21 VVL 17 
VVL H22 H3  H 0 1 N N N 4.111 5.594 23.604 4.423  -1.082 -2.134 H22 VVL 18 
VVL H24 H4  H 0 1 N N N 5.893 7.320 23.749 5.418  -1.807 -0.001 H24 VVL 19 
VVL H16 H5  H 0 1 N N N 2.059 7.913 19.174 1.120  1.992  -0.890 H16 VVL 20 
VVL H17 H6  H 0 1 N N N 1.686 6.218 19.637 1.120  1.991  0.890  H17 VVL 21 
VVL H18 H7  H 0 1 N N N 4.607 3.690 16.927 -3.445 0.775  -0.001 H18 VVL 22 
VVL H19 H8  H 0 1 N N N 5.284 7.608 16.027 -1.164 -2.522 0.012  H19 VVL 23 
VVL H23 H9  H 0 1 N N N 6.084 8.916 21.835 4.428  -1.076 2.131  H23 VVL 24 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VVL C01 C02 SING N N 1  
VVL C01 C03 SING N N 2  
VVL C01 N04 DOUB N N 3  
VVL C02 N05 SING N N 4  
VVL C02 S06 DOUB N N 5  
VVL C03 C07 SING N N 6  
VVL N04 N08 SING N N 7  
VVL N05 C09 SING N N 8  
VVL N08 C09 SING N N 9  
VVL C07 C10 DOUB Y N 10 
VVL C07 C11 SING Y N 11 
VVL C09 S12 DOUB N N 12 
VVL C10 C13 SING Y N 13 
VVL C11 C14 DOUB Y N 14 
VVL C13 C15 DOUB Y N 15 
VVL C14 C15 SING Y N 16 
VVL C10 H20 SING N N 17 
VVL C11 H21 SING N N 18 
VVL C13 H22 SING N N 19 
VVL C15 H24 SING N N 20 
VVL C03 H16 SING N N 21 
VVL C03 H17 SING N N 22 
VVL N05 H18 SING N N 23 
VVL N08 H19 SING N N 24 
VVL C14 H23 SING N N 25 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VVL SMILES           ACDLabs              12.01 "S=C1NC(=S)C(Cc2ccccc2)=NN1"                                                             
VVL InChI            InChI                1.06  "InChI=1S/C10H9N3S2/c14-9-8(12-13-10(15)11-9)6-7-4-2-1-3-5-7/h1-5H,6H2,(H2,11,13,14,15)" 
VVL InChIKey         InChI                1.06  LJIJCOCWWHDFLK-UHFFFAOYSA-N                                                              
VVL SMILES_CANONICAL CACTVS               3.385 "S=C1NN=C(Cc2ccccc2)C(=S)N1"                                                             
VVL SMILES           CACTVS               3.385 "S=C1NN=C(Cc2ccccc2)C(=S)N1"                                                             
VVL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CC2=NNC(=S)NC2=S"                                                             
VVL SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CC2=NNC(=S)NC2=S"                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
VVL "SYSTEMATIC NAME" ACDLabs              12.01 "6-benzyl-1,2,4-triazine-3,5(2H,4H)-dithione"        
VVL "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "6-(phenylmethyl)-2~{H}-1,2,4-triazine-3,5-dithione" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VVL "Create component" 2023-05-09 RCSB 
VVL "Initial release"  2023-06-14 RCSB 
# 
