data_XLL
# 
_chem_comp.id                                    XLL 
_chem_comp.name                                  "4-tert-butyl-2-chloro-5-[(1H-pyrazolo[3,4-b]pyridin-3-yl)methoxy]benzonitrile" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C18 H17 Cl N4 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-07 
_chem_comp.pdbx_modified_date                    2024-12-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        340.807 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     XLL 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7G3D 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
XLL C10 C1  C  0 1 N N N N N N -12.118 2.990  44.628 3.597  -2.627 -0.058 C10 XLL 1  
XLL C13 C2  C  0 1 Y N N N N N -12.594 6.616  44.755 1.014  0.039  -0.241 C13 XLL 2  
XLL O14 O1  O  0 1 N N N N N N -13.219 7.497  45.565 -0.324 0.161  -0.444 O14 XLL 3  
XLL C15 C3  C  0 1 N N N N N N -13.695 7.025  46.824 -1.059 -1.044 -0.666 C15 XLL 4  
XLL C16 C4  C  0 1 Y N N N N N -14.179 8.174  47.657 -2.516 -0.714 -0.870 C16 XLL 5  
XLL C19 C5  C  0 1 Y N N N N N -14.424 9.966  49.047 -4.739 -0.291 -0.476 C19 XLL 6  
XLL C21 C6  C  0 1 Y N N N N N -12.888 11.400 49.927 -5.855 -0.289 1.542  C21 XLL 7  
XLL C22 C7  C  0 1 Y N N N N N -11.814 10.710 49.254 -4.701 -0.613 2.241  C22 XLL 8  
XLL C23 C8  C  0 1 Y N N N N N -12.111 9.574  48.474 -3.522 -0.782 1.562  C23 XLL 9  
XLL C24 C9  C  0 1 Y N N N N N -13.431 9.198  48.333 -3.531 -0.620 0.172  C24 XLL 10 
XLL C1  C10 C  0 1 N N N N N N -11.056 8.939  42.087 2.205  3.599  0.258  C1  XLL 11 
XLL C2  C11 C  0 1 N N N N N N -11.941 8.585  43.295 1.141  2.531  -0.005 C2  XLL 12 
XLL C3  C12 C  0 1 N N N N N N -11.482 9.518  44.476 0.084  2.582  1.099  C3  XLL 13 
XLL C4  C13 C  0 1 N N N N N N -13.443 8.892  42.859 0.478  2.795  -1.358 C4  XLL 14 
XLL C5  C14 C  0 1 Y N N N N N -11.937 7.113  43.635 1.788  1.170  -0.019 C5  XLL 15 
XLL C6  C15 C  0 1 Y N N N N N -11.315 6.131  42.857 3.150  1.053  0.189  C6  XLL 16 
XLL C7  C16 C  0 1 Y N N N N N -11.373 4.799  43.163 3.750  -0.191 0.178  C7  XLL 17 
XLL CL8 CL1 CL 0 0 N N N N N N -10.545 3.657  42.136 5.460  -0.333 0.440  CL8 XLL 18 
XLL C9  C17 C  0 1 Y N N N N N -12.027 4.357  44.246 2.979  -1.335 -0.045 C9  XLL 19 
XLL N11 N1  N  0 1 N N N N N N -12.229 1.870  44.984 4.087  -3.651 -0.068 N11 XLL 20 
XLL C12 C18 C  0 1 Y N N N N N -12.634 5.249  45.025 1.603  -1.214 -0.250 C12 XLL 21 
XLL N17 N2  N  0 1 Y N N N N N -15.481 8.290  47.948 -3.093 -0.455 -2.009 N17 XLL 22 
XLL N18 N3  N  0 1 Y N N N N N -15.603 9.389  48.778 -4.452 -0.194 -1.810 N18 XLL 23 
XLL N20 N4  N  0 1 Y N N N N N -14.201 11.026 49.840 -5.850 -0.139 0.235  N20 XLL 24 
XLL H37 H1  H  0 1 N N N N N N -14.524 6.321  46.659 -0.673 -1.547 -1.553 H37 XLL 25 
XLL H36 H2  H  0 1 N N N N N N -12.878 6.512  47.352 -0.953 -1.699 0.198  H36 XLL 26 
XLL H39 H3  H  0 1 N N N N N N -12.642 12.259 50.533 -6.780 -0.157 2.084  H39 XLL 27 
XLL H40 H4  H  0 1 N N N N N N -10.796 11.059 49.347 -4.731 -0.730 3.314  H40 XLL 28 
XLL H41 H5  H  0 1 N N N N N N -11.323 9.010  47.997 -2.612 -1.034 2.086  H41 XLL 29 
XLL H27 H6  H  0 1 N N N N N N -11.338 8.311  41.229 2.677  3.411  1.222  H27 XLL 30 
XLL H25 H7  H  0 1 N N N N N N -11.197 9.999  41.828 2.958  3.563  -0.529 H25 XLL 31 
XLL H26 H8  H  0 1 N N N N N N -10.001 8.761  42.341 1.737  4.583  0.269  H26 XLL 32 
XLL H28 H9  H  0 1 N N N N N N -12.087 9.304  45.369 -0.384 3.566  1.110  H28 XLL 33 
XLL H29 H10 H  0 1 N N N N N N -10.421 9.332  44.699 -0.674 1.821  0.912  H29 XLL 34 
XLL H30 H11 H  0 1 N N N N N N -11.617 10.570 44.185 0.556  2.394  2.064  H30 XLL 35 
XLL H32 H12 H  0 1 N N N N N N -14.123 8.655  43.691 1.232  2.759  -2.145 H32 XLL 36 
XLL H33 H13 H  0 1 N N N N N N -13.539 9.957  42.599 -0.280 2.034  -1.546 H33 XLL 37 
XLL H31 H14 H  0 1 N N N N N N -13.704 8.276  41.986 0.010  3.779  -1.348 H31 XLL 38 
XLL H34 H15 H  0 1 N N N N N N -10.766 6.437  41.979 3.746  1.937  0.361  H34 XLL 39 
XLL H35 H16 H  0 1 N N N N N N -13.175 4.903  45.894 1.002  -2.094 -0.423 H35 XLL 40 
XLL H38 H17 H  0 1 N N N N N N -16.476 9.717  49.138 -5.090 0.024  -2.507 H38 XLL 41 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
XLL C1  C2  SING N N 1  
XLL C2  C3  SING N N 2  
XLL C2  C4  SING N N 3  
XLL C2  C5  SING N N 4  
XLL C5  C6  DOUB Y N 5  
XLL C5  C13 SING Y N 6  
XLL C6  C7  SING Y N 7  
XLL C7  CL8 SING N N 8  
XLL C7  C9  DOUB Y N 9  
XLL C9  C10 SING N N 10 
XLL C9  C12 SING Y N 11 
XLL C10 N11 TRIP N N 12 
XLL C12 C13 DOUB Y N 13 
XLL C13 O14 SING N N 14 
XLL O14 C15 SING N N 15 
XLL C15 C16 SING N N 16 
XLL C16 N17 DOUB Y N 17 
XLL C16 C24 SING Y N 18 
XLL N17 N18 SING Y N 19 
XLL N18 C19 SING Y N 20 
XLL C19 N20 DOUB Y N 21 
XLL C19 C24 SING Y N 22 
XLL N20 C21 SING Y N 23 
XLL C21 C22 DOUB Y N 24 
XLL C22 C23 SING Y N 25 
XLL C23 C24 DOUB Y N 26 
XLL C15 H37 SING N N 27 
XLL C15 H36 SING N N 28 
XLL C21 H39 SING N N 29 
XLL C22 H40 SING N N 30 
XLL C23 H41 SING N N 31 
XLL C1  H27 SING N N 32 
XLL C1  H25 SING N N 33 
XLL C1  H26 SING N N 34 
XLL C3  H28 SING N N 35 
XLL C3  H29 SING N N 36 
XLL C3  H30 SING N N 37 
XLL C4  H32 SING N N 38 
XLL C4  H33 SING N N 39 
XLL C4  H31 SING N N 40 
XLL C6  H34 SING N N 41 
XLL C12 H35 SING N N 42 
XLL N18 H38 SING N N 43 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
XLL SMILES           ACDLabs              12.01 "CC(C)(C)c1cc(Cl)c(C#N)cc1OCc1n[NH]c2ncccc21"                                                                                 
XLL InChI            InChI                1.06  "InChI=1S/C18H17ClN4O/c1-18(2,3)13-8-14(19)11(9-20)7-16(13)24-10-15-12-5-4-6-21-17(12)23-22-15/h4-8H,10H2,1-3H3,(H,21,22,23)" 
XLL InChIKey         InChI                1.06  IGVXALUESOTNEK-UHFFFAOYSA-N                                                                                                   
XLL SMILES_CANONICAL CACTVS               3.385 "CC(C)(C)c1cc(Cl)c(cc1OCc2n[nH]c3ncccc23)C#N"                                                                                 
XLL SMILES           CACTVS               3.385 "CC(C)(C)c1cc(Cl)c(cc1OCc2n[nH]c3ncccc23)C#N"                                                                                 
XLL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(C)c1cc(c(cc1OCc2c3cccnc3[nH]n2)C#N)Cl"                                                                                 
XLL SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)(C)c1cc(c(cc1OCc2c3cccnc3[nH]n2)C#N)Cl"                                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
XLL "SYSTEMATIC NAME" ACDLabs              12.01 "4-tert-butyl-2-chloro-5-[(1H-pyrazolo[3,4-b]pyridin-3-yl)methoxy]benzonitrile"               
XLL "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-~{tert}-butyl-2-chloranyl-5-(1~{H}-pyrazolo[3,4-b]pyridin-3-ylmethoxy)benzenecarbonitrile" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
XLL "Create component" 2023-06-07 RCSB 
XLL "Initial release"  2024-12-18 RCSB 
# 
