data_0VM
# 
_chem_comp.id                                    0VM 
_chem_comp.name                                  "2-[(4-{[3-(trifluoromethyl)pyridin-2-yl]oxy}phenyl)amino]-1H-benzimidazole-6-carbonitrile" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H12 F3 N5 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-07-13 
_chem_comp.pdbx_modified_date                    2013-05-17 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        395.337 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     0VM 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4G16 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
0VM C8  C8  C 0 1 Y N N 38.313 -12.115 26.658 -6.887 -0.970 0.265  C8  0VM 1  
0VM C9  C9  C 0 1 Y N N 37.604 -13.366 26.365 -6.477 0.325  -0.053 C9  0VM 2  
0VM C10 C10 C 0 1 Y N N 36.970 -14.069 27.480 -5.128 0.616  -0.126 C10 0VM 3  
0VM C11 C11 C 0 1 Y N N 37.064 -13.496 28.835 -4.176 -0.391 0.119  C11 0VM 4  
0VM C13 C13 C 0 1 Y N N 37.774 -12.248 29.105 -4.603 -1.686 0.437  C13 0VM 5  
0VM C14 C14 C 0 1 Y N N 38.424 -11.527 27.996 -5.934 -1.969 0.509  C14 0VM 6  
0VM N3  N3  N 0 1 Y N N 36.274 -15.190 27.575 -4.408 1.766  -0.409 N3  0VM 7  
0VM C12 C12 C 0 1 Y N N 35.950 -15.323 28.875 -3.084 1.442  -0.331 C12 0VM 8  
0VM N4  N4  N 0 1 Y N N 36.390 -14.360 29.630 -2.953 0.175  -0.021 N4  0VM 9  
0VM C15 C15 C 0 1 Y N N 35.536 -20.479 28.414 1.885  1.087  0.129  C15 0VM 10 
0VM C16 C16 C 0 1 Y N N 36.590 -19.612 27.930 1.623  2.108  -0.774 C16 0VM 11 
0VM C17 C17 C 0 1 Y N N 36.490 -18.213 28.259 0.323  2.516  -0.998 C17 0VM 12 
0VM C18 C18 C 0 1 Y N N 35.352 -17.746 29.046 -0.723 1.904  -0.320 C18 0VM 13 
0VM C19 C19 C 0 1 Y N N 34.310 -18.616 29.528 -0.461 0.882  0.583  C19 0VM 14 
0VM C20 C20 C 0 1 Y N N 34.393 -20.036 29.209 0.840  0.476  0.807  C20 0VM 15 
0VM N1  N1  N 0 1 N N N 35.178 -16.448 29.396 -2.041 2.317  -0.547 N1  0VM 16 
0VM C7  C7  C 0 1 N N N 38.930 -11.448 25.602 -8.283 -1.279 0.349  C7  0VM 17 
0VM N2  N2  N 0 1 N N N 39.433 -10.923 24.711 -9.390 -1.524 0.416  N2  0VM 18 
0VM C1  C1  C 0 1 Y N N 32.860 -23.599 25.362 4.333  -2.849 -1.327 C1  0VM 19 
0VM C2  C2  C 0 1 Y N N 33.687 -24.444 26.156 5.285  -2.085 -0.665 C2  0VM 20 
0VM C3  C3  C 0 1 Y N N 34.662 -23.883 27.090 4.891  -0.887 -0.097 C3  0VM 21 
0VM C4  C4  C 0 1 Y N N 34.761 -22.459 27.193 3.563  -0.490 -0.207 C4  0VM 22 
0VM N5  N5  N 0 1 Y N N 33.952 -21.651 26.407 2.685  -1.246 -0.846 N5  0VM 23 
0VM C6  C6  C 0 1 Y N N 33.022 -22.166 25.511 3.031  -2.394 -1.398 C6  0VM 24 
0VM O1  O1  O 0 1 N N N 35.644 -21.875 28.096 3.164  0.683  0.345  O1  0VM 25 
0VM C5  C5  C 0 1 N N N 35.542 -24.858 27.863 5.887  -0.023 0.632  C5  0VM 26 
0VM F1  F1  F 0 1 N N N 36.768 -24.365 28.155 7.144  -0.636 0.604  F1  0VM 27 
0VM F3  F3  F 0 1 N N N 35.704 -25.974 27.094 5.965  1.227  0.009  F3  0VM 28 
0VM F2  F2  F 0 1 N N N 34.919 -25.189 29.016 5.479  0.142  1.959  F2  0VM 29 
0VM H1  H1  H 0 1 N N N 37.552 -13.755 25.359 -7.210 1.096  -0.241 H1  0VM 30 
0VM H2  H2  H 0 1 N N N 37.822 -11.856 30.110 -3.876 -2.462 0.627  H2  0VM 31 
0VM H3  H3  H 0 1 N N N 38.960 -10.604 28.162 -6.256 -2.970 0.755  H3  0VM 32 
0VM H4  H4  H 0 1 N N N 36.036 -15.814 26.830 -4.776 2.638  -0.622 H4  0VM 33 
0VM H6  H6  H 0 1 N N N 37.414 -19.997 27.348 2.437  2.584  -1.301 H6  0VM 34 
0VM H7  H7  H 0 1 N N N 37.247 -17.518 27.928 0.120  3.311  -1.701 H7  0VM 35 
0VM H8  H8  H 0 1 N N N 33.488 -18.226 30.111 -1.273 0.406  1.111  H8  0VM 36 
0VM H9  H9  H 0 1 N N N 33.640 -20.733 29.547 1.044  -0.319 1.509  H9  0VM 37 
0VM H10 H10 H 0 1 N N N 34.463 -16.244 30.065 -2.221 3.219  -0.855 H10 0VM 38 
0VM H11 H11 H 0 1 N N N 32.138 -24.011 24.673 4.608  -3.787 -1.785 H11 0VM 39 
0VM H12 H12 H 0 1 N N N 33.592 -25.516 26.067 6.309  -2.419 -0.595 H12 0VM 40 
0VM H13 H13 H 0 1 N N N 32.416 -21.494 24.922 2.287  -2.984 -1.911 H13 0VM 41 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
0VM N2  C7  TRIP N N 1  
0VM C1  C6  DOUB Y N 2  
0VM C1  C2  SING Y N 3  
0VM C6  N5  SING Y N 4  
0VM C7  C8  SING N N 5  
0VM C2  C3  DOUB Y N 6  
0VM C9  C8  DOUB Y N 7  
0VM C9  C10 SING Y N 8  
0VM N5  C4  DOUB Y N 9  
0VM C8  C14 SING Y N 10 
0VM C3  C4  SING Y N 11 
0VM C3  C5  SING N N 12 
0VM F3  C5  SING N N 13 
0VM C4  O1  SING N N 14 
0VM C10 N3  SING Y N 15 
0VM C10 C11 DOUB Y N 16 
0VM N3  C12 SING Y N 17 
0VM C5  F1  SING N N 18 
0VM C5  F2  SING N N 19 
0VM C16 C17 DOUB Y N 20 
0VM C16 C15 SING Y N 21 
0VM C14 C13 DOUB Y N 22 
0VM O1  C15 SING N N 23 
0VM C17 C18 SING Y N 24 
0VM C15 C20 DOUB Y N 25 
0VM C11 C13 SING Y N 26 
0VM C11 N4  SING Y N 27 
0VM C12 N1  SING N N 28 
0VM C12 N4  DOUB Y N 29 
0VM C18 N1  SING N N 30 
0VM C18 C19 DOUB Y N 31 
0VM C20 C19 SING Y N 32 
0VM C9  H1  SING N N 33 
0VM C13 H2  SING N N 34 
0VM C14 H3  SING N N 35 
0VM N3  H4  SING N N 36 
0VM C16 H6  SING N N 37 
0VM C17 H7  SING N N 38 
0VM C19 H8  SING N N 39 
0VM C20 H9  SING N N 40 
0VM N1  H10 SING N N 41 
0VM C1  H11 SING N N 42 
0VM C2  H12 SING N N 43 
0VM C6  H13 SING N N 44 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
0VM SMILES           ACDLabs              12.01 "FC(F)(F)c4cccnc4Oc1ccc(cc1)Nc3nc2ccc(C#N)cc2n3"                                                                                       
0VM InChI            InChI                1.03  "InChI=1S/C20H12F3N5O/c21-20(22,23)15-2-1-9-25-18(15)29-14-6-4-13(5-7-14)26-19-27-16-8-3-12(11-24)10-17(16)28-19/h1-10H,(H2,26,27,28)" 
0VM InChIKey         InChI                1.03  GAHCTGQCJXQYNK-UHFFFAOYSA-N                                                                                                            
0VM SMILES_CANONICAL CACTVS               3.370 "FC(F)(F)c1cccnc1Oc2ccc(Nc3[nH]c4cc(ccc4n3)C#N)cc2"                                                                                    
0VM SMILES           CACTVS               3.370 "FC(F)(F)c1cccnc1Oc2ccc(Nc3[nH]c4cc(ccc4n3)C#N)cc2"                                                                                    
0VM SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1cc(c(nc1)Oc2ccc(cc2)Nc3[nH]c4cc(ccc4n3)C#N)C(F)(F)F"                                                                                
0VM SMILES           "OpenEye OEToolkits" 1.7.6 "c1cc(c(nc1)Oc2ccc(cc2)Nc3[nH]c4cc(ccc4n3)C#N)C(F)(F)F"                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
0VM "SYSTEMATIC NAME" ACDLabs              12.01 "2-[(4-{[3-(trifluoromethyl)pyridin-2-yl]oxy}phenyl)amino]-1H-benzimidazole-6-carbonitrile" 
0VM "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "2-[[4-[3-(trifluoromethyl)pyridin-2-yl]oxyphenyl]amino]-3H-benzimidazole-5-carbonitrile"   
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
0VM "Create component" 2012-07-13 RCSB 
0VM "Initial release"  2013-05-22 RCSB 
# 
