data_2LM
# 
_chem_comp.id                                    2LM 
_chem_comp.name                                  "(2E)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)imino]-4-(methylsulfanyl)butanoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H19 N2 O7 P S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-03-03 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        378.338 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     2LM 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3AEL 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
2LM C    C    C 0 1 N N N -7.199 -7.063 17.568 -1.227 2.848  -2.102 C    2LM 1  
2LM N    N    N 0 1 N N N -7.397 -4.805 18.314 0.196  2.356  -0.240 N    2LM 2  
2LM O1   O1   O 0 1 N N N -6.459 -8.051 17.445 -2.271 2.625  -2.681 O1   2LM 3  
2LM P    P    P 0 1 N N N -5.811 -1.522 22.416 -0.516 -3.633 -0.494 P    2LM 4  
2LM N1   N1   N 0 1 Y N N -9.015 -0.052 17.463 4.127  -0.589 0.182  N1   2LM 5  
2LM C2   C2   C 0 1 Y N N -8.783 -1.072 16.599 4.214  0.666  0.577  C2   2LM 6  
2LM C3   C3   C 0 1 Y N N -8.243 -2.264 17.082 3.070  1.407  0.837  C3   2LM 7  
2LM O3   O3   O 0 1 N N N -8.005 -3.292 16.219 3.164  2.700  1.244  O3   2LM 8  
2LM C4   C4   C 0 1 Y N N -7.917 -2.419 18.458 1.825  0.807  0.674  C4   2LM 9  
2LM C5   C5   C 0 1 Y N N -8.212 -1.354 19.309 1.780  -0.513 0.257  C5   2LM 10 
2LM C6   C6   C 0 1 Y N N -8.738 -0.166 18.784 2.963  -1.187 0.019  C6   2LM 11 
2LM CA   CA   C 0 1 N N N -7.018 -6.072 18.649 -0.905 2.122  -0.851 CA   2LM 12 
2LM CB   CB   C 0 1 N N N -6.517 -6.458 20.067 -1.872 1.107  -0.297 CB   2LM 13 
2LM SD   SD   S 0 1 N N N -7.807 -8.440 21.737 -3.908 0.544  1.440  SD   2LM 14 
2LM CE   CE   C 0 1 N N N -9.432 -9.004 21.299 -4.837 1.496  2.674  CE   2LM 15 
2LM CG   CG   C 0 1 N N N -6.692 -7.965 20.398 -2.743 1.765  0.774  CG   2LM 16 
2LM C2A  C2A  C 0 1 N N N -9.128 -0.883 15.113 5.569  1.301  0.749  C2A  2LM 17 
2LM C4A  C4A  C 0 1 N N N -7.389 -3.713 19.014 0.557  1.575  0.946  C4A  2LM 18 
2LM C5A  C5A  C 0 1 N N N -7.919 -1.418 20.801 0.456  -1.208 0.067  C5A  2LM 19 
2LM OP1  OP1  O 0 1 N N N -4.447 -0.880 22.273 -1.386 -3.124 -1.577 OP1  2LM 20 
2LM OP2  OP2  O 0 1 N N N -5.835 -2.983 22.334 -1.382 -3.809 0.852  OP2  2LM 21 
2LM OP3  OP3  O 0 1 N N N -6.718 -0.991 23.518 0.101  -5.056 -0.925 OP3  2LM 22 
2LM OP4  OP4  O 0 1 N N N -6.545 -1.034 21.045 0.680  -2.587 -0.230 OP4  2LM 23 
2LM O2   O2   O 0 1 N N N -8.166 -6.927 16.779 -0.361 3.750  -2.600 O2   2LM 24 
2LM HO3  HO3  H 0 1 N N N -7.640 -4.028 16.696 3.173  3.341  0.520  HO3  2LM 25 
2LM H6   H6   H 0 1 N N N -8.925 0.670  19.442 2.934  -2.216 -0.307 H6   2LM 26 
2LM HB   HB   H 0 1 N N N -5.446 -6.216 20.129 -2.505 0.732  -1.101 HB   2LM 27 
2LM HBA  HBA  H 0 1 N N N -7.092 -5.877 20.803 -1.317 0.279  0.144  HBA  2LM 28 
2LM HE   HE   H 0 1 N N N -9.992 -9.255 22.212 -5.578 0.852  3.147  HE   2LM 29 
2LM HEA  HEA  H 0 1 N N N -9.961 -8.209 20.752 -4.151 1.878  3.430  HEA  2LM 30 
2LM HEB  HEB  H 0 1 N N N -9.351 -9.897 20.661 -5.339 2.331  2.185  HEB  2LM 31 
2LM HG   HG   H 0 1 N N N -7.080 -8.441 19.486 -2.110 2.140  1.578  HG   2LM 32 
2LM HGA  HGA  H 0 1 N N N -5.696 -8.341 20.674 -3.298 2.593  0.333  HGA  2LM 33 
2LM H2A  H2A  H 0 1 N N N -9.542 0.124  14.957 5.874  1.765  -0.190 H2A  2LM 34 
2LM H2A1 H2A1 H 0 0 N N N -8.218 -1.002 14.507 5.518  2.061  1.529  H2A1 2LM 35 
2LM H2A2 H2A2 H 0 0 N N N -9.871 -1.636 14.811 6.295  0.539  1.031  H2A2 2LM 36 
2LM H4A  H4A  H 0 1 N N N -8.001 -3.926 19.903 0.713  2.247  1.790  H4A  2LM 37 
2LM H5A  H5A  H 0 1 N N N -8.591 -0.730 21.335 -0.133 -1.124 0.981  H5A  2LM 38 
2LM H5A1 H5A1 H 0 0 N N N -8.081 -2.445 21.161 -0.084 -0.741 -0.757 H5A1 2LM 39 
2LM HOP2 HOP2 H 0 0 N N N -4.953 -3.308 22.198 -0.874 -4.140 1.606  HOP2 2LM 40 
2LM HOP3 HOP3 H 0 0 N N N -6.274 -0.293 23.985 -0.564 -5.736 -1.100 HOP3 2LM 41 
2LM H4A1 H4A1 H 0 0 N N N -6.333 -3.523 19.255 -0.247 0.878  1.180  H4A1 2LM 42 
2LM H2   H2   H 0 1 N N N -8.181 -7.654 16.167 -0.613 4.196  -3.420 H2   2LM 43 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
2LM C   O1   DOUB N N 1  
2LM C   CA   SING N N 2  
2LM C   O2   SING N N 3  
2LM N   CA   DOUB N N 4  
2LM N   C4A  SING N N 5  
2LM P   OP1  DOUB N N 6  
2LM P   OP2  SING N N 7  
2LM P   OP3  SING N N 8  
2LM P   OP4  SING N N 9  
2LM N1  C2   DOUB Y N 10 
2LM N1  C6   SING Y N 11 
2LM C2  C3   SING Y N 12 
2LM C2  C2A  SING N N 13 
2LM C3  O3   SING N N 14 
2LM C3  C4   DOUB Y N 15 
2LM C4  C5   SING Y N 16 
2LM C4  C4A  SING N N 17 
2LM C5  C6   DOUB Y N 18 
2LM C5  C5A  SING N N 19 
2LM CA  CB   SING N N 20 
2LM CB  CG   SING N N 21 
2LM SD  CE   SING N N 22 
2LM SD  CG   SING N N 23 
2LM C5A OP4  SING N N 24 
2LM O3  HO3  SING N N 25 
2LM C6  H6   SING N N 26 
2LM CB  HB   SING N N 27 
2LM CB  HBA  SING N N 28 
2LM CE  HE   SING N N 29 
2LM CE  HEA  SING N N 30 
2LM CE  HEB  SING N N 31 
2LM CG  HG   SING N N 32 
2LM CG  HGA  SING N N 33 
2LM C2A H2A  SING N N 34 
2LM C2A H2A1 SING N N 35 
2LM C2A H2A2 SING N N 36 
2LM C4A H4A  SING N N 37 
2LM C5A H5A  SING N N 38 
2LM C5A H5A1 SING N N 39 
2LM OP2 HOP2 SING N N 40 
2LM OP3 HOP3 SING N N 41 
2LM C4A H4A1 SING N N 42 
2LM O2  H2   SING N N 43 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
2LM SMILES           ACDLabs              12.01 "O=C(O)/C(=N/Cc1c(cnc(c1O)C)COP(=O)(O)O)CCSC"                                                                                                   
2LM SMILES_CANONICAL CACTVS               3.370 "CSCCC(=NCc1c(O)c(C)ncc1CO[P](O)(O)=O)C(O)=O"                                                                                                   
2LM SMILES           CACTVS               3.370 "CSCCC(=NCc1c(O)c(C)ncc1CO[P](O)(O)=O)C(O)=O"                                                                                                   
2LM SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "Cc1c(c(c(cn1)COP(=O)(O)O)C/N=C(\CCSC)/C(=O)O)O"                                                                                                
2LM SMILES           "OpenEye OEToolkits" 1.7.0 "Cc1c(c(c(cn1)COP(=O)(O)O)CN=C(CCSC)C(=O)O)O"                                                                                                   
2LM InChI            InChI                1.03  "InChI=1S/C13H19N2O7PS/c1-8-12(16)10(6-15-11(13(17)18)3-4-24-2)9(5-14-8)7-22-23(19,20)21/h5,16H,3-4,6-7H2,1-2H3,(H,17,18)(H2,19,20,21)/b15-11+" 
2LM InChIKey         InChI                1.03  RNHGWTJOZCEIDD-RVDMUPIBSA-N                                                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
2LM "SYSTEMATIC NAME" ACDLabs              12.01 "(2E)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)imino]-4-(methylsulfanyl)butanoic acid" 
2LM "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2E)-2-[[3-hydroxy-2-methyl-5-(phosphonooxymethyl)pyridin-4-yl]methylimino]-4-methylsulfanyl-butanoic acid"      
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
2LM "Create component"     2010-03-03 PDBJ 
2LM "Modify aromatic_flag" 2011-06-04 RCSB 
2LM "Modify descriptor"    2011-06-04 RCSB 
# 
