data_9MM
# 
_chem_comp.id                                    9MM 
_chem_comp.name                                  "4-{(2S)-2-[2-(4-chlorophenyl)-5,6-difluoro-1H-benzimidazol-1-yl]-2-cyclohexylethoxy}-3-fluorobenzoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H24 Cl F3 N2 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-05-19 
_chem_comp.pdbx_modified_date                    2017-06-30 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        528.950 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9MM 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5Q14 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9MM N1   N1  N  0 1 Y N N 13.264 24.169 3.823 1.406  1.008  -0.224 N1   9MM 1  
9MM N3   N2  N  0 1 Y N N 13.518 25.680 2.172 3.026  2.446  -0.560 N3   9MM 2  
9MM C4   C1  C  0 1 Y N N 12.026 24.804 3.673 0.849  2.270  -0.144 C4   9MM 3  
9MM C5   C2  C  0 1 Y N N 12.204 25.730 2.647 1.901  3.177  -0.362 C5   9MM 4  
9MM C6   C3  C  0 1 Y N N 10.819 24.638 4.337 -0.435 2.741  0.090  C6   9MM 5  
9MM C7   C4  C  0 1 N N S 13.647 23.070 4.789 0.699  -0.266 -0.064 C7   9MM 6  
9MM C8   C5  C  0 1 Y N N 11.133 26.537 2.258 1.643  4.551  -0.335 C8   9MM 7  
9MM C10  C6  C  0 1 N N N 9.208  18.085 0.723 -7.050 -1.194 -0.841 C10  9MM 8  
9MM C13  C7  C  0 1 Y N N 10.241 18.972 1.334 -5.584 -1.222 -0.686 C13  9MM 9  
9MM C15  C8  C  0 1 Y N N 10.934 21.147 2.012 -3.543 -2.467 -0.437 C15  9MM 10 
9MM C17  C9  C  0 1 Y N N 12.138 20.673 2.481 -2.827 -1.273 -0.396 C17  9MM 11 
9MM C20  C10 C  0 1 Y N N 11.453 18.463 1.806 -4.861 -0.027 -0.638 C20  9MM 12 
9MM C21  C11 C  0 1 Y N N 12.408 19.304 2.382 -3.492 -0.057 -0.494 C21  9MM 13 
9MM C22  C12 C  0 1 N N N 13.538 23.532 6.253 0.985  -0.837 1.326  C22  9MM 14 
9MM C24  C13 C  0 1 Y N N 15.838 23.197 2.001 5.020  0.214  -0.181 C24  9MM 15 
9MM C14  C14 C  0 1 N N N 12.829 21.819 4.466 -0.805 -0.038 -0.223 C14  9MM 16 
9MM O18  O1  O  0 1 N N N 12.984 21.599 3.031 -1.477 -1.298 -0.258 O18  9MM 17 
9MM C16  C15 C  0 1 Y N N 9.985  20.334 1.444 -4.914 -2.445 -0.582 C16  9MM 18 
9MM F27  F1  F  0 1 N N N 10.677 22.471 2.114 -2.893 -3.647 -0.341 F27  9MM 19 
9MM O19  O2  O  0 1 N N N 9.488  16.829 0.718 -7.694 -0.014 -0.941 O19  9MM 20 
9MM O28  O3  O  0 1 N N N 8.174  18.531 0.272 -7.678 -2.233 -0.877 O28  9MM 21 
9MM C33  C16 C  0 1 N N N 14.089 22.466 7.221 0.387  0.086  2.389  C33  9MM 22 
9MM C35  C17 C  0 1 N N N 13.969 22.897 8.691 0.673  -0.485 3.780  C35  9MM 23 
9MM C37  C18 C  0 1 N N N 14.680 24.217 8.939 0.044  -1.875 3.899  C37  9MM 24 
9MM C36  C19 C  0 1 N N N 14.160 25.322 7.973 0.643  -2.798 2.836  C36  9MM 25 
9MM C34  C20 C  0 1 N N N 14.257 24.864 6.486 0.357  -2.227 1.445  C34  9MM 26 
9MM C9   C21 C  0 1 Y N N 9.781  25.435 3.935 -0.676 4.100  0.108  C9   9MM 27 
9MM C12  C22 C  0 1 Y N N 9.930  26.365 2.921 0.362  5.003  -0.103 C12  9MM 28 
9MM C2   C23 C  0 1 Y N N 14.106 24.738 2.895 2.740  1.169  -0.487 C2   9MM 29 
9MM C11  C24 C  0 1 Y N N 15.514 24.337 2.737 3.714  0.069  -0.651 C11  9MM 30 
9MM C23  C25 C  0 1 Y N N 16.544 25.065 3.333 3.330  -1.119 -1.276 C23  9MM 31 
9MM C31  C26 C  0 1 Y N N 17.869 24.670 3.186 4.244  -2.141 -1.426 C31  9MM 32 
9MM C29  C27 C  0 1 Y N N 18.155 23.541 2.445 5.538  -1.992 -0.958 C29  9MM 33 
9MM C30  C28 C  0 1 Y N N 17.155 22.799 1.852 5.926  -0.814 -0.342 C30  9MM 34 
9MM CL32 CL1 CL 0 0 N N N 19.811 23.037 2.257 6.682  -3.284 -1.151 CL32 9MM 35 
9MM F26  F2  F  0 1 N N N 8.873  27.119 2.578 0.113  6.330  -0.077 F26  9MM 36 
9MM F25  F3  F  0 1 N N N 8.574  25.313 4.547 -1.927 4.557  0.336  F25  9MM 37 
9MM H1   H1  H  0 1 N N N 10.704 23.916 5.132 -1.244 2.046  0.257  H1   9MM 38 
9MM H2   H2  H  0 1 N N N 14.703 22.824 4.605 1.042  -0.969 -0.824 H2   9MM 39 
9MM H3   H3  H  0 1 N N N 11.239 27.268 1.470 2.445  5.257  -0.496 H3   9MM 40 
9MM H4   H4  H  0 1 N N N 11.654 17.405 1.725 -5.375 0.919  -0.715 H4   9MM 41 
9MM H5   H5  H  0 1 N N N 13.342 18.903 2.746 -2.933 0.867  -0.457 H5   9MM 42 
9MM H6   H6  H  0 1 N N N 12.472 23.677 6.483 2.062  -0.911 1.474  H6   9MM 43 
9MM H7   H7  H  0 1 N N N 15.051 22.618 1.542 5.323  1.130  0.303  H7   9MM 44 
9MM H8   H8  H  0 1 N N N 11.770 21.979 4.716 -1.175 0.547  0.619  H8   9MM 45 
9MM H9   H9  H  0 1 N N N 13.212 20.955 5.029 -0.995 0.501  -1.151 H9   9MM 46 
9MM H10  H10 H  0 1 N N N 9.053  20.747 1.088 -5.469 -3.370 -0.614 H10  9MM 47 
9MM H11  H11 H  0 1 N N N 8.774  16.347 0.318 -8.655 -0.046 -1.041 H11  9MM 48 
9MM H12  H12 H  0 1 N N N 13.524 21.533 7.079 0.834  1.077  2.304  H12  9MM 49 
9MM H13  H13 H  0 1 N N N 15.150 22.292 6.989 -0.691 0.161  2.241  H13  9MM 50 
9MM H14  H14 H  0 1 N N N 12.905 23.010 8.946 1.750  -0.559 3.928  H14  9MM 51 
9MM H15  H15 H  0 1 N N N 14.419 22.122 9.329 0.246  0.173  4.537  H15  9MM 52 
9MM H16  H16 H  0 1 N N N 15.760 24.079 8.780 0.248  -2.281 4.890  H16  9MM 53 
9MM H17  H17 H  0 1 N N N 14.500 24.533 9.977 -1.033 -1.800 3.751  H17  9MM 54 
9MM H18  H18 H  0 1 N N N 14.765 26.231 8.109 1.720  -2.872 2.984  H18  9MM 55 
9MM H19  H19 H  0 1 N N N 13.109 25.542 8.213 0.195  -3.788 2.921  H19  9MM 56 
9MM H20  H20 H  0 1 N N N 15.317 24.748 6.218 -0.720 -2.153 1.298  H20  9MM 57 
9MM H21  H21 H  0 1 N N N 13.799 25.633 5.846 0.783  -2.885 0.688  H21  9MM 58 
9MM H22  H22 H  0 1 N N N 16.310 25.944 3.915 2.321  -1.237 -1.641 H22  9MM 59 
9MM H23  H23 H  0 1 N N N 18.664 25.239 3.645 3.948  -3.061 -1.910 H23  9MM 60 
9MM H24  H24 H  0 1 N N N 17.397 21.917 1.278 6.937  -0.703 0.021  H24  9MM 61 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9MM O28  C10 DOUB N N 1  
9MM O19  C10 SING N N 2  
9MM C10  C13 SING N N 3  
9MM C13  C16 DOUB Y N 4  
9MM C13  C20 SING Y N 5  
9MM C16  C15 SING Y N 6  
9MM C20  C21 DOUB Y N 7  
9MM C30  C24 DOUB Y N 8  
9MM C30  C29 SING Y N 9  
9MM C24  C11 SING Y N 10 
9MM C15  F27 SING N N 11 
9MM C15  C17 DOUB Y N 12 
9MM N3   C5  SING Y N 13 
9MM N3   C2  DOUB Y N 14 
9MM CL32 C29 SING N N 15 
9MM C8   C5  DOUB Y N 16 
9MM C8   C12 SING Y N 17 
9MM C21  C17 SING Y N 18 
9MM C29  C31 DOUB Y N 19 
9MM C17  O18 SING N N 20 
9MM F26  C12 SING N N 21 
9MM C5   C4  SING Y N 22 
9MM C11  C2  SING N N 23 
9MM C11  C23 DOUB Y N 24 
9MM C2   N1  SING Y N 25 
9MM C12  C9  DOUB Y N 26 
9MM O18  C14 SING N N 27 
9MM C31  C23 SING Y N 28 
9MM C4   N1  SING Y N 29 
9MM C4   C6  DOUB Y N 30 
9MM N1   C7  SING N N 31 
9MM C9   C6  SING Y N 32 
9MM C9   F25 SING N N 33 
9MM C14  C7  SING N N 34 
9MM C7   C22 SING N N 35 
9MM C22  C34 SING N N 36 
9MM C22  C33 SING N N 37 
9MM C34  C36 SING N N 38 
9MM C33  C35 SING N N 39 
9MM C36  C37 SING N N 40 
9MM C35  C37 SING N N 41 
9MM C6   H1  SING N N 42 
9MM C7   H2  SING N N 43 
9MM C8   H3  SING N N 44 
9MM C20  H4  SING N N 45 
9MM C21  H5  SING N N 46 
9MM C22  H6  SING N N 47 
9MM C24  H7  SING N N 48 
9MM C14  H8  SING N N 49 
9MM C14  H9  SING N N 50 
9MM C16  H10 SING N N 51 
9MM O19  H11 SING N N 52 
9MM C33  H12 SING N N 53 
9MM C33  H13 SING N N 54 
9MM C35  H14 SING N N 55 
9MM C35  H15 SING N N 56 
9MM C37  H16 SING N N 57 
9MM C37  H17 SING N N 58 
9MM C36  H18 SING N N 59 
9MM C36  H19 SING N N 60 
9MM C34  H20 SING N N 61 
9MM C34  H21 SING N N 62 
9MM C23  H22 SING N N 63 
9MM C31  H23 SING N N 64 
9MM C30  H24 SING N N 65 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9MM SMILES           ACDLabs              12.01 "n3(C(C1CCCCC1)COc2c(F)cc(C(O)=O)cc2)c5cc(F)c(cc5nc3c4ccc(cc4)Cl)F"                                                                                                                        
9MM InChI            InChI                1.03  "InChI=1S/C28H24ClF3N2O3/c29-19-9-6-17(7-10-19)27-33-23-13-20(30)21(31)14-24(23)34(27)25(16-4-2-1-3-5-16)15-37-26-11-8-18(28(35)36)12-22(26)32/h6-14,16,25H,1-5,15H2,(H,35,36)/t25-/m1/s1" 
9MM InChIKey         InChI                1.03  CPOSGAZIIDJVMJ-RUZDIDTESA-N                                                                                                                                                                
9MM SMILES_CANONICAL CACTVS               3.385 "OC(=O)c1ccc(OC[C@H](C2CCCCC2)n3c4cc(F)c(F)cc4nc3c5ccc(Cl)cc5)c(F)c1"                                                                                                                      
9MM SMILES           CACTVS               3.385 "OC(=O)c1ccc(OC[CH](C2CCCCC2)n3c4cc(F)c(F)cc4nc3c5ccc(Cl)cc5)c(F)c1"                                                                                                                       
9MM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1cc(ccc1c2nc3cc(c(cc3n2[C@H](COc4ccc(cc4F)C(=O)O)C5CCCCC5)F)F)Cl"                                                                                                                        
9MM SMILES           "OpenEye OEToolkits" 2.0.6 "c1cc(ccc1c2nc3cc(c(cc3n2C(COc4ccc(cc4F)C(=O)O)C5CCCCC5)F)F)Cl"                                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9MM "SYSTEMATIC NAME" ACDLabs              12.01 "4-{(2S)-2-[2-(4-chlorophenyl)-5,6-difluoro-1H-benzimidazol-1-yl]-2-cyclohexylethoxy}-3-fluorobenzoic acid"           
9MM "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "4-[(2~{S})-2-[2-(4-chlorophenyl)-5,6-bis(fluoranyl)benzimidazol-1-yl]-2-cyclohexyl-ethoxy]-3-fluoranyl-benzoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9MM "Create component" 2017-05-19 RCSB 
9MM "Initial release"  2017-07-05 RCSB 
# 
