data_ARM
# 
_chem_comp.id                                    ARM 
_chem_comp.name                                  DEOXY-METHYL-ARGININE 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C7 H16 N4 O" 
_chem_comp.mon_nstd_parent_comp_id               ARG 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     1999-07-08 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        172.228 
_chem_comp.one_letter_code                       R 
_chem_comp.three_letter_code                     ARM 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
ARM N    N    N 0 1 N N N Y Y N 36.058 12.234 144.106 -1.785 0.227  2.296  N    ARM 1  
ARM CA   CA   C 0 1 N N S Y N N 35.029 11.848 145.069 -0.456 -0.397 2.296  CA   ARM 2  
ARM CB   CB   C 0 1 N N N N N N 33.713 11.590 144.335 0.324  0.064  1.064  CB   ARM 3  
ARM CG   CG   C 0 1 N N N N N N 33.206 12.816 143.626 -0.431 -0.343 -0.201 CG   ARM 4  
ARM CD   CD   C 0 1 N N N N N N 32.095 12.508 142.647 0.349  0.119  -1.432 CD   ARM 5  
ARM NE   NE   N 0 1 N N N N N N 31.558 13.746 142.088 -0.374 -0.271 -2.645 NE   ARM 6  
ARM CZ   CZ   C 0 1 N N N N N N 30.531 13.822 141.244 0.138  0.039  -3.882 CZ   ARM 7  
ARM NH1  NH1  N 0 1 N N N N N N 29.909 12.721 140.836 1.269  0.681  -3.976 NH1  ARM 8  
ARM NH2  NH2  N 0 1 N N N N N N 30.101 15.014 140.831 -0.540 -0.327 -5.020 NH2  ARM 9  
ARM C    C    C 0 1 N N N Y N Y 35.352 10.622 145.984 0.288  0.004  3.543  C    ARM 10 
ARM O    O    O 0 1 N N N Y N Y 34.482 10.679 147.158 0.070  1.075  4.057  O    ARM 11 
ARM CM   CM   C 0 1 N N N N N N 36.819 10.601 146.514 1.304  -0.929 4.148  CM   ARM 12 
ARM H    1HN  H 0 1 N N N Y Y N 36.936 12.406 144.595 -2.204 0.017  1.403  H    ARM 13 
ARM H2   2HN  H 0 1 N Y N Y Y N 35.772 13.030 143.535 -1.636 1.225  2.320  H2   ARM 14 
ARM HA   HA   H 0 1 N N N Y N N 34.966 12.715 145.766 -0.564 -1.482 2.271  HA   ARM 15 
ARM HB2  1HB  H 0 1 N N N N N N 33.805 10.728 143.633 0.433  1.149  1.089  HB2  ARM 16 
ARM HB3  2HB  H 0 1 N N N N N N 32.941 11.175 145.025 1.311  -0.399 1.064  HB3  ARM 17 
ARM HG2  1HG  H 0 1 N N N N N N 32.890 13.597 144.355 -0.539 -1.427 -0.225 HG2  ARM 18 
ARM HG3  2HG  H 0 1 N N N N N N 34.039 13.361 143.125 -1.417 0.120  -0.201 HG3  ARM 19 
ARM HD2  1HD  H 0 1 N N N N N N 32.425 11.800 141.851 0.458  1.203  -1.408 HD2  ARM 20 
ARM HD3  2HD  H 0 1 N N N N N N 31.297 11.878 143.106 1.336  -0.344 -1.433 HD3  ARM 21 
ARM HE   HNE  H 0 1 N N N N N N 32.338 14.230 141.644 -1.215 -0.749 -2.575 HE   ARM 22 
ARM HH1  HN1  H 0 1 N N N N N N 28.938 12.711 141.149 1.630  0.900  -4.849 HH1  ARM 23 
ARM HH21 1HN2 H 0 0 N N N N N N 29.314 15.072 140.184 -0.178 -0.108 -5.892 HH21 ARM 24 
ARM HH22 2HN2 H 0 0 N N N N N N 30.889 15.521 140.428 -1.381 -0.805 -4.949 HH22 ARM 25 
ARM HM1  1HM  H 0 1 N N N N N N 37.049 9.726  147.166 1.735  -0.470 5.038  HM1  ARM 26 
ARM HM2  2HM  H 0 1 N N N N N N 37.543 10.661 145.668 0.818  -1.866 4.422  HM2  ARM 27 
ARM HM3  3HM  H 0 1 N N N N N N 37.061 11.555 147.036 2.093  -1.127 3.423  HM3  ARM 28 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ARM N   CA   SING N N 1  
ARM N   H    SING N N 2  
ARM N   H2   SING N N 3  
ARM CA  CB   SING N N 4  
ARM CA  C    SING N N 5  
ARM CA  HA   SING N N 6  
ARM CB  CG   SING N N 7  
ARM CB  HB2  SING N N 8  
ARM CB  HB3  SING N N 9  
ARM CG  CD   SING N N 10 
ARM CG  HG2  SING N N 11 
ARM CG  HG3  SING N N 12 
ARM CD  NE   SING N N 13 
ARM CD  HD2  SING N N 14 
ARM CD  HD3  SING N N 15 
ARM NE  CZ   SING N N 16 
ARM NE  HE   SING N N 17 
ARM CZ  NH1  DOUB N N 18 
ARM CZ  NH2  SING N N 19 
ARM NH1 HH1  SING N N 20 
ARM NH2 HH21 SING N N 21 
ARM NH2 HH22 SING N N 22 
ARM C   O    DOUB N N 23 
ARM C   CM   SING N N 24 
ARM CM  HM1  SING N N 25 
ARM CM  HM2  SING N N 26 
ARM CM  HM3  SING N N 27 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
ARM SMILES           ACDLabs              10.04 "O=C(C)C(N)CCCNC(=[N@H])N"                                                             
ARM SMILES_CANONICAL CACTVS               3.341 "CC(=O)[C@@H](N)CCCNC(N)=N"                                                            
ARM SMILES           CACTVS               3.341 "CC(=O)[CH](N)CCCNC(N)=N"                                                              
ARM SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(=O)[C@H](CCCNC(=N)N)N"                                                             
ARM SMILES           "OpenEye OEToolkits" 1.5.0 "CC(=O)C(CCCNC(=N)N)N"                                                                 
ARM InChI            InChI                1.03  "InChI=1S/C7H16N4O/c1-5(12)6(8)3-2-4-11-7(9)10/h6H,2-4,8H2,1H3,(H4,9,10,11)/t6-/m0/s1" 
ARM InChIKey         InChI                1.03  GCCQNSQKSSOQIR-LURJTMIESA-N                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
ARM "SYSTEMATIC NAME" ACDLabs              10.04 "1-[(4S)-4-amino-5-oxohexyl]guanidine"  
ARM "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "1-[(4S)-4-amino-5-oxo-hexyl]guanidine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
ARM "Create component"  1999-07-08 RCSB 
ARM "Modify descriptor" 2011-06-04 RCSB 
ARM "Modify backbone"   2023-11-03 PDBE 
ARM "Modify PCM"        2024-09-27 PDBE 
# 
loop_
_pdbx_chem_comp_pcm.pcm_id 
_pdbx_chem_comp_pcm.comp_id 
_pdbx_chem_comp_pcm.modified_residue_id 
_pdbx_chem_comp_pcm.type 
_pdbx_chem_comp_pcm.category 
_pdbx_chem_comp_pcm.position 
_pdbx_chem_comp_pcm.polypeptide_position 
_pdbx_chem_comp_pcm.comp_id_linking_atom 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 
1 ARM ARG Dehydroxylation "Named protein modification" "Amino-acid backbone" C-terminal ? ? ? ? 
2 ARM ARG Methylation     "Named protein modification" "Amino-acid backbone" C-terminal ? ? ? ? 
# 
