data_CJM
# 
_chem_comp.id                                    CJM 
_chem_comp.name                                  "2-[(2S)-1-(6-{[(4,5-difluoro-1H-benzimidazol-2-yl)methyl]amino}-9-ethyl-9H-purin-2-yl)piperidin-2-yl]ethan-1-ol" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H26 F2 N8 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-09-26 
_chem_comp.pdbx_modified_date                    2017-12-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        456.492 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     CJM 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6B3E 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
CJM C1  C1  C 0 1 N N N -0.033 14.517 -6.849  -4.863 -3.799 -0.915 C1  CJM 1  
CJM C2  C2  C 0 1 N N N 0.891  15.161 -7.803  -4.140 -3.923 0.428  C2  CJM 2  
CJM C7  C3  C 0 1 Y N N 0.315  17.603 -7.823  -2.477 -2.016 0.470  C7  CJM 3  
CJM C9  C4  C 0 1 Y N N 0.735  19.268 -6.420  -2.546 0.259  0.827  C9  CJM 4  
CJM C11 C5  C 0 1 Y N N -0.409 19.778 -8.356  -0.475 -0.671 0.387  C11 CJM 5  
CJM C13 C6  C 0 1 N N N -1.358 21.998 -8.627  1.526  0.772  0.415  C13 CJM 6  
CJM C14 C7  C 0 1 Y N N -0.205 22.882 -8.781  2.983  0.686  0.038  C14 CJM 7  
CJM C16 C8  C 0 1 Y N N 1.405  24.217 -8.170  5.122  0.325  0.172  C16 CJM 8  
CJM N18 N1  N 0 1 Y N N 0.451  23.136 -9.893  3.496  1.030  -1.174 N18 CJM 9  
CJM C19 C9  C 0 1 Y N N 2.494  24.577 -10.266 5.899  0.968  -2.026 C19 CJM 10 
CJM C20 C10 C 0 1 Y N N 3.428  25.393 -9.660  7.187  0.649  -1.657 C20 CJM 11 
CJM C21 C11 C 0 1 Y N N 3.343  25.599 -8.312  7.455  0.167  -0.382 C21 CJM 12 
CJM C22 C12 C 0 1 Y N N 2.348  25.028 -7.568  6.436  0.008  0.534  C22 CJM 13 
CJM N25 N2  N 0 1 N N N 1.344  19.757 -5.271  -3.294 1.390  1.110  N25 CJM 14 
CJM C27 C13 C 0 1 N N N 1.923  21.549 -3.655  -3.403 3.837  1.072  C27 CJM 15 
CJM C30 C14 C 0 1 N N S 1.856  18.786 -4.292  -4.652 1.274  0.562  C30 CJM 16 
CJM C31 C15 C 0 1 N N N 0.761  18.360 -3.325  -4.584 1.248  -0.966 C31 CJM 17 
CJM C32 C16 C 0 1 N N N 0.198  16.997 -3.633  -5.981 0.985  -1.534 C32 CJM 18 
CJM N3  N3  N 0 1 Y N N 0.315  16.358 -8.391  -2.800 -3.340 0.318  N3  CJM 19 
CJM C4  C17 C 0 1 Y N N -0.301 16.505 -9.593  -1.646 -4.014 0.044  C4  CJM 20 
CJM N5  N4  N 0 1 Y N N -0.701 17.725 -9.844  -0.643 -3.186 0.021  N5  CJM 21 
CJM C6  C18 C 0 1 Y N N -0.312 18.431 -8.719  -1.087 -1.932 0.284  C6  CJM 22 
CJM N8  N5  N 0 1 Y N N 0.849  17.953 -6.661  -3.161 -0.909 0.740  N8  CJM 23 
CJM N10 N6  N 0 1 Y N N 0.128  20.175 -7.201  -1.237 0.385  0.652  N10 CJM 24 
CJM N12 N7  N 0 1 N N N -1.048 20.680 -9.102  0.890  -0.531 0.206  N12 CJM 25 
CJM N15 N8  N 0 1 Y N N 0.325  23.514 -7.717  3.933  0.276  0.827  N15 CJM 26 
CJM C17 C19 C 0 1 Y N N 1.482  23.987 -9.509  4.859  0.808  -1.120 C17 CJM 27 
CJM F23 F1  F 0 1 N N N 2.295  25.243 -6.246  6.704  -0.455 1.775  F23 CJM 28 
CJM F24 F2  F 0 1 N N N 4.271  26.339 -7.688  8.724  -0.143 -0.034 F24 CJM 29 
CJM C26 C20 C 0 1 N N N 1.001  21.084 -4.757  -2.625 2.601  0.617  C26 CJM 30 
CJM C28 C21 C 0 1 N N N 3.256  20.845 -3.719  -4.832 3.764  0.527  C28 CJM 31 
CJM C29 C22 C 0 1 N N N 3.096  19.334 -3.591  -5.490 2.470  1.016  C29 CJM 32 
CJM O33 O1  O 0 1 N N N 1.218  16.105 -3.983  -5.898 0.838  -2.953 O33 CJM 33 
CJM H1  H1  H 0 1 N N N 0.441  13.618 -6.429  -5.859 -4.233 -0.833 H1  CJM 34 
CJM H2  H2  H 0 1 N N N -0.270 15.220 -6.037  -4.946 -2.747 -1.187 H2  CJM 35 
CJM H3  H3  H 0 1 N N N -0.959 14.233 -7.370  -4.298 -4.329 -1.682 H3  CJM 36 
CJM H4  H4  H 0 1 N N N 1.126  14.448 -8.607  -4.705 -3.393 1.195  H4  CJM 37 
CJM H5  H5  H 0 1 N N N 1.815  15.434 -7.273  -4.057 -4.976 0.700  H5  CJM 38 
CJM H6  H6  H 0 1 N N N -2.203 22.401 -9.204  1.438  1.056  1.464  H6  CJM 39 
CJM H7  H7  H 0 1 N N N -1.633 21.944 -7.563  1.034  1.520  -0.206 H7  CJM 40 
CJM H8  H8  H 0 1 N N N 0.252  22.793 -10.811 2.998  1.367  -1.935 H8  CJM 41 
CJM H9  H9  H 0 1 N N N 2.547  24.395 -11.329 5.698  1.343  -3.019 H9  CJM 42 
CJM H10 H10 H 0 1 N N N 4.211  25.859 -10.240 7.994  0.773  -2.364 H10 CJM 43 
CJM H11 H11 H 0 1 N N N 2.085  22.632 -3.757  -3.430 3.869  2.161  H11 CJM 44 
CJM H12 H12 H 0 1 N N N 1.453  21.339 -2.683  -2.915 4.735  0.693  H12 CJM 45 
CJM H13 H13 H 0 1 N N N 2.168  17.887 -4.844  -5.110 0.352  0.921  H13 CJM 46 
CJM H14 H14 H 0 1 N N N 1.179  18.344 -2.308  -4.220 2.209  -1.330 H14 CJM 47 
CJM H15 H15 H 0 1 N N N -0.055 19.095 -3.375  -3.907 0.458  -1.287 H15 CJM 48 
CJM H16 H16 H 0 1 N N N -0.511 17.080 -4.470  -6.384 0.071  -1.097 H16 CJM 49 
CJM H17 H17 H 0 1 N N N -0.326 16.614 -2.745  -6.635 1.822  -1.293 H17 CJM 50 
CJM H18 H18 H 0 1 N N N -0.448 15.686 -10.281 -1.576 -5.078 -0.127 H18 CJM 51 
CJM H19 H19 H 0 1 N N N -1.922 20.263 -9.353  1.425  -1.295 -0.058 H19 CJM 52 
CJM H21 H21 H 0 1 N N N 1.055  21.805 -5.586  -1.611 2.643  1.015  H21 CJM 53 
CJM H22 H22 H 0 1 N N N -0.026 21.053 -4.364  -2.586 2.577  -0.472 H22 CJM 54 
CJM H23 H23 H 0 1 N N N 3.735  21.073 -4.682  -5.403 4.621  0.885  H23 CJM 55 
CJM H24 H24 H 0 1 N N N 3.892  21.208 -2.898  -4.808 3.771  -0.562 H24 CJM 56 
CJM H25 H25 H 0 1 N N N 3.031  19.081 -2.522  -6.494 2.391  0.597  H25 CJM 57 
CJM H26 H26 H 0 1 N N N 3.983  18.853 -4.028  -5.550 2.481  2.104  H26 CJM 58 
CJM H27 H27 H 0 1 N N N 0.843  15.253 -4.173  -6.748 0.668  -3.381 H27 CJM 59 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
CJM C19 C20 DOUB Y N 1  
CJM C19 C17 SING Y N 2  
CJM N18 C17 SING Y N 3  
CJM N18 C14 SING Y N 4  
CJM N5  C4  DOUB Y N 5  
CJM N5  C6  SING Y N 6  
CJM C20 C21 SING Y N 7  
CJM C4  N3  SING Y N 8  
CJM C17 C16 DOUB Y N 9  
CJM N12 C13 SING N N 10 
CJM N12 C11 SING N N 11 
CJM C14 C13 SING N N 12 
CJM C14 N15 DOUB Y N 13 
CJM C6  C11 DOUB Y N 14 
CJM C6  C7  SING Y N 15 
CJM N3  C7  SING Y N 16 
CJM N3  C2  SING N N 17 
CJM C11 N10 SING Y N 18 
CJM C21 F24 SING N N 19 
CJM C21 C22 DOUB Y N 20 
CJM C16 N15 SING Y N 21 
CJM C16 C22 SING Y N 22 
CJM C7  N8  DOUB Y N 23 
CJM C2  C1  SING N N 24 
CJM C22 F23 SING N N 25 
CJM N10 C9  DOUB Y N 26 
CJM N8  C9  SING Y N 27 
CJM C9  N25 SING N N 28 
CJM N25 C26 SING N N 29 
CJM N25 C30 SING N N 30 
CJM C26 C27 SING N N 31 
CJM C30 C29 SING N N 32 
CJM C30 C31 SING N N 33 
CJM O33 C32 SING N N 34 
CJM C28 C27 SING N N 35 
CJM C28 C29 SING N N 36 
CJM C32 C31 SING N N 37 
CJM C1  H1  SING N N 38 
CJM C1  H2  SING N N 39 
CJM C1  H3  SING N N 40 
CJM C2  H4  SING N N 41 
CJM C2  H5  SING N N 42 
CJM C13 H6  SING N N 43 
CJM C13 H7  SING N N 44 
CJM N18 H8  SING N N 45 
CJM C19 H9  SING N N 46 
CJM C20 H10 SING N N 47 
CJM C27 H11 SING N N 48 
CJM C27 H12 SING N N 49 
CJM C30 H13 SING N N 50 
CJM C31 H14 SING N N 51 
CJM C31 H15 SING N N 52 
CJM C32 H16 SING N N 53 
CJM C32 H17 SING N N 54 
CJM C4  H18 SING N N 55 
CJM N12 H19 SING N N 56 
CJM C26 H21 SING N N 57 
CJM C26 H22 SING N N 58 
CJM C28 H23 SING N N 59 
CJM C28 H24 SING N N 60 
CJM C29 H25 SING N N 61 
CJM C29 H26 SING N N 62 
CJM O33 H27 SING N N 63 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
CJM SMILES           ACDLabs              12.01 "CCn3c2nc(N1CCCCC1CCO)nc(c2nc3)NCc5nc4c(c(ccc4n5)F)F"                                                                                                                                           
CJM InChI            InChI                1.03  "InChI=1S/C22H26F2N8O/c1-2-31-12-26-19-20(25-11-16-27-15-7-6-14(23)17(24)18(15)28-16)29-22(30-21(19)31)32-9-4-3-5-13(32)8-10-33/h6-7,12-13,33H,2-5,8-11H2,1H3,(H,27,28)(H,25,29,30)/t13-/m0/s1" 
CJM InChIKey         InChI                1.03  HVFVQLFPRQYJTR-ZDUSSCGKSA-N                                                                                                                                                                     
CJM SMILES_CANONICAL CACTVS               3.385 "CCn1cnc2c(NCc3[nH]c4ccc(F)c(F)c4n3)nc(nc12)N5CCCC[C@H]5CCO"                                                                                                                                    
CJM SMILES           CACTVS               3.385 "CCn1cnc2c(NCc3[nH]c4ccc(F)c(F)c4n3)nc(nc12)N5CCCC[CH]5CCO"                                                                                                                                     
CJM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CCn1cnc2c1nc(nc2NCc3[nH]c4ccc(c(c4n3)F)F)N5CCCC[C@H]5CCO"                                                                                                                                      
CJM SMILES           "OpenEye OEToolkits" 2.0.6 "CCn1cnc2c1nc(nc2NCc3[nH]c4ccc(c(c4n3)F)F)N5CCCCC5CCO"                                                                                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
CJM "SYSTEMATIC NAME" ACDLabs              12.01 "2-[(2S)-1-(6-{[(4,5-difluoro-1H-benzimidazol-2-yl)methyl]amino}-9-ethyl-9H-purin-2-yl)piperidin-2-yl]ethan-1-ol"     
CJM "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "2-[(2~{S})-1-[6-[[4,5-bis(fluoranyl)-1~{H}-benzimidazol-2-yl]methylamino]-9-ethyl-purin-2-yl]piperidin-2-yl]ethanol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
CJM "Create component" 2017-09-26 RCSB 
CJM "Initial release"  2017-12-27 RCSB 
# 
