data_PXM
#

_chem_comp.id                                   PXM
_chem_comp.name                                 "4-(AMINOMETHYL)-5-(HYDROXYMETHYL)-2-METHYLPYRIDIN-3-OL"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C8 H12 N2 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        PYRIDOXAMINE
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2003-11-13
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       168.193
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    PXM
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1RFT
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
PXM  N1    N1    N  0  1  Y  N  N  40.289  45.598  -2.272   1.895  -0.193   0.824  N1    PXM   1  
PXM  C2    C2    C  0  1  Y  N  N  40.459  44.689  -1.247   0.912  -0.060   1.692  C2    PXM   2  
PXM  C2A   C2A   C  0  1  N  N  N  39.239  44.118  -0.547   1.204  -0.150   3.168  C2A   PXM   3  
PXM  C3    C3    C  0  1  Y  N  N  41.796  44.296  -0.937  -0.387   0.156   1.262  C3    PXM   4  
PXM  O3    O3    O  0  1  N  N  N  41.943  43.389   0.052  -1.397   0.293   2.161  O3    PXM   5  
PXM  C4    C4    C  0  1  Y  N  N  42.904  44.835  -1.673  -0.642   0.243  -0.102  C4    PXM   6  
PXM  C5    C5    C  0  1  Y  N  N  42.625  45.750  -2.797   0.419   0.097  -0.980  C5    PXM   7  
PXM  C5A   C5A   C  0  1  N  N  N  43.819  46.240  -3.657   0.194   0.176  -2.468  C5A   PXM   8  
PXM  O5    O5    O  0  1  N  N  N  43.394  47.089  -4.680   1.437  -0.005  -3.149  O5    PXM   9  
PXM  C6    C6    C  0  1  Y  N  N  41.302  46.147  -3.065   1.687  -0.122  -0.476  C6    PXM  10  
PXM  C4A   C4A   C  0  1  N  N  N  44.239  44.425  -1.331  -2.039   0.483  -0.613  C4A   PXM  11  
PXM  N4    N4    N  0  1  N  N  N  44.426  43.183  -2.102  -2.714  -0.804  -0.819  N4    PXM  12  
PXM  H2A1  1H2A  H  0  0  N  N  N  38.566  43.669  -1.314   1.439   0.842   3.553  H2A1  PXM  13  
PXM  H2A2  2H2A  H  0  0  N  N  N  39.376  43.384   0.281   0.331  -0.545   3.688  H2A2  PXM  14  
PXM  H2A3  3H2A  H  0  0  N  N  N  38.614  44.963  -0.174   2.054  -0.813   3.330  H2A3  PXM  15  
PXM  HO3   HO3   H  0  1  N  N  N  42.833  43.128   0.258  -1.755  -0.591   2.316  HO3   PXM  16  
PXM  H5A1  1H5A  H  0  0  N  N  N  44.414  45.385  -4.056  -0.219   1.152  -2.722  H5A1  PXM  17  
PXM  H5A2  2H5A  H  0  0  N  N  N  44.606  46.719  -3.029  -0.503  -0.604  -2.772  H5A2  PXM  18  
PXM  HO5   HO5   H  0  1  N  N  N  44.125  47.389  -5.207   1.249   0.052  -4.095  HO5   PXM  19  
PXM  H6    H6    H  0  1  N  N  N  41.067  46.864  -3.869   2.519  -0.237  -1.155  H6    PXM  20  
PXM  H4A1  1H4A  H  0  0  N  N  N  44.424  44.321  -0.236  -1.992   1.024  -1.559  H4A1  PXM  21  
PXM  H4A2  2H4A  H  0  0  N  N  N  45.020  45.201  -1.508  -2.596   1.073   0.114  H4A2  PXM  22  
PXM  HN41  1HN4  H  0  0  N  N  N  44.257  43.278  -3.103  -3.640  -0.595  -1.160  HN41  PXM  23  
PXM  HN42  2HN4  H  0  0  N  N  N  45.373  42.892  -1.859  -2.227  -1.270  -1.571  HN42  PXM  24  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
PXM  N1   C2    DOUB  Y  N   1  
PXM  N1   C6    SING  Y  N   2  
PXM  C2   C2A   SING  N  N   3  
PXM  C2   C3    SING  Y  N   4  
PXM  C2A  H2A1  SING  N  N   5  
PXM  C2A  H2A2  SING  N  N   6  
PXM  C2A  H2A3  SING  N  N   7  
PXM  C3   O3    SING  N  N   8  
PXM  C3   C4    DOUB  Y  N   9  
PXM  O3   HO3   SING  N  N  10  
PXM  C4   C5    SING  Y  N  11  
PXM  C4   C4A   SING  N  N  12  
PXM  C5   C5A   SING  N  N  13  
PXM  C5   C6    DOUB  Y  N  14  
PXM  C5A  O5    SING  N  N  15  
PXM  C5A  H5A1  SING  N  N  16  
PXM  C5A  H5A2  SING  N  N  17  
PXM  O5   HO5   SING  N  N  18  
PXM  C6   H6    SING  N  N  19  
PXM  C4A  N4    SING  N  N  20  
PXM  C4A  H4A1  SING  N  N  21  
PXM  C4A  H4A2  SING  N  N  22  
PXM  N4   HN41  SING  N  N  23  
PXM  N4   HN42  SING  N  N  24  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
PXM  SMILES            ACDLabs               10.04  "Oc1c(c(cnc1C)CO)CN"  
PXM  SMILES_CANONICAL  CACTVS                3.341  "Cc1ncc(CO)c(CN)c1O"  
PXM  SMILES            CACTVS                3.341  "Cc1ncc(CO)c(CN)c1O"  
PXM  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "Cc1c(c(c(cn1)CO)CN)O"  
PXM  SMILES            "OpenEye OEToolkits"  1.5.0  "Cc1c(c(c(cn1)CO)CN)O"  
PXM  InChI             InChI                 1.03   "InChI=1S/C8H12N2O2/c1-5-8(12)7(2-9)6(4-11)3-10-5/h3,11-12H,2,4,9H2,1H3"  
PXM  InChIKey          InChI                 1.03   NHZMQXZHNVQTQA-UHFFFAOYSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
PXM  "SYSTEMATIC NAME"  ACDLabs               10.04  "4-(aminomethyl)-5-(hydroxymethyl)-2-methylpyridin-3-ol"  
PXM  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "4-(aminomethyl)-5-(hydroxymethyl)-2-methyl-pyridin-3-ol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
PXM  "Create component"   2003-11-13  RCSB  
PXM  "Modify descriptor"  2011-06-04  RCSB  
PXM  "Modify synonyms"    2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     PXM
_pdbx_chem_comp_synonyms.name        PYRIDOXAMINE
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
