data_RAM
# 
_chem_comp.id                                    RAM 
_chem_comp.name                                  alpha-L-rhamnopyranose 
_chem_comp.type                                  "L-saccharide, alpha linking" 
_chem_comp.pdbx_type                             ATOMS 
_chem_comp.formula                               "C6 H12 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "alpha-L-rhamnose; 6-deoxy-alpha-L-mannopyranose; L-rhamnose; rhamnose" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     1999-07-08 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        164.156 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     RAM 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1TYU 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_pdbx_chem_comp_synonyms.ordinal 
_pdbx_chem_comp_synonyms.comp_id 
_pdbx_chem_comp_synonyms.name 
_pdbx_chem_comp_synonyms.provenance 
_pdbx_chem_comp_synonyms.type 
1 RAM alpha-L-rhamnose              PDB ? 
2 RAM 6-deoxy-alpha-L-mannopyranose PDB ? 
3 RAM L-rhamnose                    PDB ? 
4 RAM rhamnose                      PDB ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
RAM C1  C1  C 0 1 N N R N N N 75.743 60.310 96.718 1.623  -0.117 -0.520 C1  RAM 1  
RAM C2  C2  C 0 1 N N R N N N 76.964 59.401 96.820 0.441  0.039  -1.479 C2  RAM 2  
RAM C3  C3  C 0 1 N N R N N N 76.653 57.972 96.379 -0.820 -0.518 -0.811 C3  RAM 3  
RAM C4  C4  C 0 1 N N R N N N 75.279 57.500 96.935 -0.992 0.158  0.552  C4  RAM 4  
RAM C5  C5  C 0 1 N N S N N N 74.781 58.441 97.981 0.298  -0.008 1.358  C5  RAM 5  
RAM C6  C6  C 0 1 N N N N N N 73.434 58.022 98.549 0.124  0.634  2.736  C6  RAM 6  
RAM O1  O1  O 0 1 N Y N N N N 76.129 61.497 97.319 1.791  -1.499 -0.197 O1  RAM 7  
RAM O2  O2  O 0 1 N N N N N N 78.029 59.952 96.047 0.252  1.422  -1.782 O2  RAM 8  
RAM O3  O3  O 0 1 N N N N N N 76.721 57.790 94.986 -1.958 -0.245 -1.632 O3  RAM 9  
RAM O4  O4  O 0 1 N N N N N N 75.400 56.217 97.537 -2.077 -0.450 1.255  O4  RAM 10 
RAM O5  O5  O 0 1 N N N N N N 74.618 59.796 97.449 1.378  0.622  0.673  O5  RAM 11 
RAM H1  H1  H 0 1 N N N N N N 75.430 60.412 95.652 2.529  0.254  -0.998 H1  RAM 12 
RAM H2  H2  H 0 1 N N N N N N 77.271 59.345 97.890 0.641  -0.511 -2.398 H2  RAM 13 
RAM H3  H3  H 0 1 N N N N N N 77.455 57.333 96.816 -0.717 -1.595 -0.676 H3  RAM 14 
RAM H4  H4  H 0 1 N N N N N N 74.568 57.464 96.076 -1.199 1.219  0.409  H4  RAM 15 
RAM H5  H5  H 0 1 N N N N N N 75.553 58.418 98.784 0.515  -1.069 1.478  H5  RAM 16 
RAM H61 H61 H 0 1 N N N N N N 73.062 58.725 99.330 1.042  0.513  3.311  H61 RAM 17 
RAM H62 H62 H 0 1 N N N N N N 72.680 57.889 97.737 -0.092 1.695  2.617  H62 RAM 18 
RAM H63 H63 H 0 1 N N N N N N 73.469 56.976 98.934 -0.699 0.151  3.261  H63 RAM 19 
RAM HO1 HO1 H 0 1 N Y N N N N 75.368 62.063 97.255 2.547  -1.556 0.403  HO1 RAM 20 
RAM HO2 HO2 H 0 1 N Y N N N N 78.789 59.386 96.110 1.070  1.733  -2.194 HO2 RAM 21 
RAM HO3 HO3 H 0 1 N Y N N N N 76.527 56.901 94.711 -1.800 -0.679 -2.482 HO3 RAM 22 
RAM HO4 HO4 H 0 1 N Y N N N N 74.560 55.928 97.876 -2.149 0.005  2.106  HO4 RAM 23 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
RAM C1 C2  SING N N 1  
RAM C1 O1  SING N N 2  
RAM C1 O5  SING N N 3  
RAM C1 H1  SING N N 4  
RAM C2 C3  SING N N 5  
RAM C2 O2  SING N N 6  
RAM C2 H2  SING N N 7  
RAM C3 C4  SING N N 8  
RAM C3 O3  SING N N 9  
RAM C3 H3  SING N N 10 
RAM C4 C5  SING N N 11 
RAM C4 O4  SING N N 12 
RAM C4 H4  SING N N 13 
RAM C5 C6  SING N N 14 
RAM C5 O5  SING N N 15 
RAM C5 H5  SING N N 16 
RAM C6 H61 SING N N 17 
RAM C6 H62 SING N N 18 
RAM C6 H63 SING N N 19 
RAM O1 HO1 SING N N 20 
RAM O2 HO2 SING N N 21 
RAM O3 HO3 SING N N 22 
RAM O4 HO4 SING N N 23 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
RAM SMILES           ACDLabs              10.04 "OC1C(O)C(OC(O)C1O)C"                                                          
RAM SMILES_CANONICAL CACTVS               3.341 "C[C@@H]1O[C@@H](O)[C@H](O)[C@H](O)[C@H]1O"                                    
RAM SMILES           CACTVS               3.341 "C[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O"                                           
RAM SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)O)O)O)O"                                  
RAM SMILES           "OpenEye OEToolkits" 1.5.0 "CC1C(C(C(C(O1)O)O)O)O"                                                        
RAM InChI            InChI                1.03  "InChI=1S/C6H12O5/c1-2-3(7)4(8)5(9)6(10)11-2/h2-10H,1H3/t2-,3-,4+,5+,6+/m0/s1" 
RAM InChIKey         InChI                1.03  SHZGCJCMOBCMKK-HGVZOGFYSA-N                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
RAM "SYSTEMATIC NAME"                     ACDLabs              10.04 6-deoxy-alpha-L-mannopyranose                   
RAM "SYSTEMATIC NAME"                     "OpenEye OEToolkits" 1.5.0 "(2R,3R,4R,5R,6S)-6-methyloxane-2,3,4,5-tetrol" 
RAM "CONDENSED IUPAC CARBOHYDRATE SYMBOL" GMML                 1.0   LRhapa                                          
RAM "COMMON NAME"                         GMML                 1.0   a-L-rhamnopyranose                              
RAM "IUPAC CARBOHYDRATE SYMBOL"           PDB-CARE             1.0   a-L-Rhap                                        
RAM "SNFG CARBOHYDRATE SYMBOL"            GMML                 1.0   Rha                                             
# 
loop_
_pdbx_chem_comp_feature.comp_id 
_pdbx_chem_comp_feature.type 
_pdbx_chem_comp_feature.value 
_pdbx_chem_comp_feature.source 
_pdbx_chem_comp_feature.support 
RAM "CARBOHYDRATE ISOMER"                 L        PDB ? 
RAM "CARBOHYDRATE RING"                   pyranose PDB ? 
RAM "CARBOHYDRATE ANOMER"                 alpha    PDB ? 
RAM "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose   PDB ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
RAM "Create component"   1999-07-08 EBI  
RAM "Modify descriptor"  2011-06-04 RCSB 
RAM "Other modification" 2019-08-12 RCSB 
RAM "Other modification" 2019-12-19 RCSB 
RAM "Other modification" 2020-07-03 RCSB 
RAM "Modify name"        2020-07-17 RCSB 
RAM "Modify synonyms"    2020-07-17 RCSB 
RAM "Modify PCM"         2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            RAM 
_pdbx_chem_comp_pcm.modified_residue_id                02V 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Carbohydrate 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               O1 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   C24 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
