data_SVM
#

_chem_comp.id                                   SVM
_chem_comp.name                                 "1-[(1~{R},2~{R},4~{S})-2-bicyclo[2.2.1]heptanyl]-3-(2-pyridin-2-ylethyl)thiourea"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C15 H21 N3 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-03-11
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       275.412
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    SVM
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5RA6
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
SVM  N1   N1   N  0  1  Y  N  N  51.275  119.522  32.629  -4.519  -0.598  -0.760  N1   SVM   1  
SVM  C4   C1   C  0  1  Y  N  N  51.205  117.732  31.017  -5.068   1.194   0.655  C4   SVM   2  
SVM  C5   C2   C  0  1  Y  N  N  52.562  117.734  30.921  -6.305   0.623   0.910  C5   SVM   3  
SVM  C6   C3   C  0  1  Y  N  N  53.297  118.640  31.677  -6.616  -0.581   0.297  C6   SVM   4  
SVM  C7   C4   C  0  1  Y  N  N  52.624  119.508  32.511  -5.687  -1.170  -0.540  C7   SVM   5  
SVM  C8   C5   C  0  1  N  N  R  44.011  120.968  31.451   3.114  -0.209  -0.237  C8   SVM   6  
SVM  C10  C6   C  0  1  N  N  S  42.160  119.585  32.195   4.989   0.583   1.141  C10  SVM   7  
SVM  C13  C7   C  0  1  N  N  R  43.128  120.375  30.305   4.296   0.365  -1.077  C13  SVM   8  
SVM  N    N2   N  0  1  N  N  N  47.332  119.675  30.977  -0.433   0.737  -0.430  N    SVM   9  
SVM  C    C8   C  0  1  N  N  N  46.542  120.772  31.179   0.689   0.022  -0.216  C    SVM  10  
SVM  C1   C9   C  0  1  N  N  N  48.733  119.748  30.906  -1.744   0.143  -0.154  C1   SVM  11  
SVM  C11  C10  C  0  1  N  N  N  41.134  120.574  31.640   5.895  -0.542   0.554  C11  SVM  12  
SVM  C12  C11  C  0  1  N  N  N  41.767  121.057  30.325   5.437  -0.686  -0.915  C12  SVM  13  
SVM  C14  C12  C  0  1  N  N  N  42.730  118.982  30.884   4.808   1.499  -0.121  C14  SVM  14  
SVM  C2   C13  C  0  1  N  N  N  49.133  118.669  31.866  -2.842   1.157  -0.479  C2   SVM  15  
SVM  C3   C14  C  0  1  Y  N  N  50.608  118.628  31.857  -4.190   0.547  -0.195  C3   SVM  16  
SVM  C9   C15  C  0  1  N  N  N  43.328  120.427  32.739   3.573  -0.065   1.232  C9   SVM  17  
SVM  N2   N3   N  0  1  N  N  N  45.243  120.349  31.267   1.895   0.568  -0.470  N2   SVM  18  
SVM  S    S1   S  0  1  N  N  N  47.117  122.392  31.231   0.583  -1.580   0.379  S    SVM  19  
SVM  H1   H1   H  0  1  N  N  N  50.612  117.037  30.441  -4.793   2.131   1.115  H1   SVM  20  
SVM  H2   H2   H  0  1  N  N  N  53.063  117.039  30.264  -7.011   1.106   1.570  H2   SVM  21  
SVM  H3   H3   H  0  1  N  N  N  54.375  118.664  31.612  -7.570  -1.054   0.473  H3   SVM  22  
SVM  H4   H4   H  0  1  N  N  N  53.199  120.209  33.097  -5.921  -2.108  -1.021  H4   SVM  23  
SVM  H5   H5   H  0  1  N  N  N  44.036  122.067  31.425   2.948  -1.258  -0.482  H5   SVM  24  
SVM  H6   H6   H  0  1  N  N  N  41.756  118.845  32.902   5.347   1.074   2.046  H6   SVM  25  
SVM  H7   H7   H  0  1  N  N  N  43.620  120.338  29.322   4.057   0.654  -2.101  H7   SVM  26  
SVM  H8   H8   H  0  1  N  N  N  46.894  118.782  30.875  -0.373   1.644  -0.767  H8   SVM  27  
SVM  H9   H9   H  0  1  N  N  N  49.096  119.537  29.889  -1.877  -0.747  -0.769  H9   SVM  28  
SVM  H10  H10  H  0  1  N  N  N  49.102  120.732  31.230  -1.804  -0.132   0.900  H10  SVM  29  
SVM  H11  H11  H  0  1  N  N  N  40.983  121.414  32.334   6.944  -0.246   0.597  H11  SVM  30  
SVM  H12  H12  H  0  1  N  N  N  40.171  120.076  31.452   5.742  -1.475   1.095  H12  SVM  31  
SVM  H13  H13  H  0  1  N  N  N  41.877  122.151  30.322   5.056  -1.691  -1.097  H13  SVM  32  
SVM  H14  H14  H  0  1  N  N  N  41.161  120.747  29.461   6.259  -0.462  -1.594  H14  SVM  33  
SVM  H15  H15  H  0  1  N  N  N  41.973  118.460  30.280   4.055   2.270   0.038  H15  SVM  34  
SVM  H16  H16  H  0  1  N  N  N  43.591  118.317  31.049   5.755   1.921  -0.458  H16  SVM  35  
SVM  H17  H17  H  0  1  N  N  N  48.765  118.903  32.876  -2.709   2.047   0.136  H17  SVM  36  
SVM  H18  H18  H  0  1  N  N  N  48.724  117.701  31.542  -2.782   1.432  -1.533  H18  SVM  37  
SVM  H19  H19  H  0  1  N  N  N  44.023  119.805  33.322   2.892   0.586   1.780  H19  SVM  38  
SVM  H20  H20  H  0  1  N  N  N  42.960  121.252  33.366   3.633  -1.043   1.709  H20  SVM  39  
SVM  H21  H21  H  0  1  N  N  N  45.160  119.356  31.177   1.954   1.475  -0.807  H21  SVM  40  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
SVM  C13  C12  SING  N  N   1  
SVM  C13  C14  SING  N  N   2  
SVM  C13  C8   SING  N  N   3  
SVM  C12  C11  SING  N  N   4  
SVM  C14  C10  SING  N  N   5  
SVM  C1   N    SING  N  N   6  
SVM  C1   C2   SING  N  N   7  
SVM  C5   C4   DOUB  Y  N   8  
SVM  C5   C6   SING  Y  N   9  
SVM  N    C    SING  N  N  10  
SVM  C4   C3   SING  Y  N  11  
SVM  C    S    DOUB  N  N  12  
SVM  C    N2   SING  N  N  13  
SVM  N2   C8   SING  N  N  14  
SVM  C8   C9   SING  N  N  15  
SVM  C11  C10  SING  N  N  16  
SVM  C6   C7   DOUB  Y  N  17  
SVM  C3   C2   SING  N  N  18  
SVM  C3   N1   DOUB  Y  N  19  
SVM  C10  C9   SING  N  N  20  
SVM  C7   N1   SING  Y  N  21  
SVM  C4   H1   SING  N  N  22  
SVM  C5   H2   SING  N  N  23  
SVM  C6   H3   SING  N  N  24  
SVM  C7   H4   SING  N  N  25  
SVM  C8   H5   SING  N  N  26  
SVM  C10  H6   SING  N  N  27  
SVM  C13  H7   SING  N  N  28  
SVM  N    H8   SING  N  N  29  
SVM  C1   H9   SING  N  N  30  
SVM  C1   H10  SING  N  N  31  
SVM  C11  H11  SING  N  N  32  
SVM  C11  H12  SING  N  N  33  
SVM  C12  H13  SING  N  N  34  
SVM  C12  H14  SING  N  N  35  
SVM  C14  H15  SING  N  N  36  
SVM  C14  H16  SING  N  N  37  
SVM  C2   H17  SING  N  N  38  
SVM  C2   H18  SING  N  N  39  
SVM  C9   H19  SING  N  N  40  
SVM  C9   H20  SING  N  N  41  
SVM  N2   H21  SING  N  N  42  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
SVM  InChI             InChI                 1.03   "InChI=1S/C15H21N3S/c19-15(17-8-6-13-3-1-2-7-16-13)18-14-10-11-4-5-12(14)9-11/h1-3,7,11-12,14H,4-6,8-10H2,(H2,17,18,19)/t11-,12+,14+/m0/s1"  
SVM  InChIKey          InChI                 1.03   OUSKFHAFKTWQAS-OUCADQQQSA-N  
SVM  SMILES_CANONICAL  CACTVS                3.385  "S=C(NCCc1ccccn1)N[C@@H]2C[C@H]3CC[C@@H]2C3"  
SVM  SMILES            CACTVS                3.385  "S=C(NCCc1ccccn1)N[CH]2C[CH]3CC[CH]2C3"  
SVM  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "c1ccnc(c1)CCNC(=S)N[C@@H]2C[C@H]3CC[C@@H]2C3"  
SVM  SMILES            "OpenEye OEToolkits"  2.0.6  "c1ccnc(c1)CCNC(=S)NC2CC3CCC2C3"  
#
_pdbx_chem_comp_identifier.comp_id          SVM
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.6
_pdbx_chem_comp_identifier.identifier       "1-[(1~{R},2~{R},4~{S})-2-bicyclo[2.2.1]heptanyl]-3-(2-pyridin-2-ylethyl)thiourea"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
SVM  "Create component"  2020-03-11  RCSB  
SVM  "Initial release"   2020-07-22  RCSB  
##
