data_ZDM
#

_chem_comp.id                                   ZDM
_chem_comp.name                                 "nonyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside"
_chem_comp.type                                 SACCHARIDE
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C21 H40 O11"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        nonyl-beta-D-maltoside
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2011-03-03
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       468.536
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    ZDM
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3QNQ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ZDM  C1    C1    C  0  1  N  N  R  30.659  102.432  53.607  -0.228  -2.307   0.669  C1    ZDM   1  
ZDM  O1    O1    O  0  1  N  N  N  27.618  103.571  57.966  -4.543   0.300   1.340  O1    ZDM   2  
ZDM  C2    C2    C  0  1  N  N  R  30.256  102.047  54.962  -1.637  -2.166   0.086  C2    ZDM   3  
ZDM  O2    O2    O  0  1  N  N  N  29.660  104.906  60.714  -6.226   2.814  -0.728  O2    ZDM   4  
ZDM  C3    C3    C  0  1  N  N  S  28.868  102.287  55.079  -2.052  -0.692   0.134  C3    ZDM   5  
ZDM  O3    O3    O  0  1  N  N  N  28.644  100.933  59.003  -5.597  -1.936  -1.364  O3    ZDM   6  
ZDM  C4    C4    C  0  1  N  N  R  28.155  101.465  54.076  -1.022   0.145  -0.628  C4    ZDM   7  
ZDM  O4    O4    O  0  1  N  N  N  31.328  102.818  59.649  -7.236   0.366  -1.807  O4    ZDM   8  
ZDM  C5    C5    C  0  1  N  N  R  29.412  102.018  58.480  -5.727  -0.893  -0.396  C5    ZDM   9  
ZDM  O5    O5    O  0  1  N  N  N  28.629  101.618  52.667   0.271  -0.056  -0.055  O5    ZDM  10  
ZDM  C6    C6    C  0  1  N  N  R  30.013  101.518  52.593   0.732  -1.407  -0.114  C6    ZDM  11  
ZDM  O6    O6    O  0  1  N  N  N  27.450  106.324  58.518  -3.558   2.750   2.477  O6    ZDM  12  
ZDM  C7    C7    C  0  1  N  N  S  29.855  102.814  59.609  -5.991   0.437  -1.109  C7    ZDM  13  
ZDM  O7    O7    O  0  1  N  N  N  28.234  101.980  56.399  -3.337  -0.538  -0.474  O7    ZDM  14  
ZDM  C8    C8    C  0  1  N  N  S  29.323  104.110  59.552  -6.051   1.558  -0.068  C8    ZDM  15  
ZDM  C9    C9    C  0  1  N  N  R  27.870  104.061  59.302  -4.743   1.576   0.728  C9    ZDM  16  
ZDM  C10   C10   C  0  1  N  N  R  28.666  102.813  57.453  -4.431  -0.781   0.412  C10   ZDM  17  
ZDM  C11   C11   C  0  1  N  N  N  27.282  105.410  59.497  -4.819   2.655   1.810  C11   ZDM  18  
ZDM  O16   O16   O  0  1  N  N  N  30.474  101.813  51.281   2.039  -1.490   0.459  O16   ZDM  19  
ZDM  C18   C18   C  0  1  N  N  N  31.605  101.137  50.714   3.039  -0.774  -0.267  C18   ZDM  20  
ZDM  C19   C19   C  0  1  N  N  N  31.951  101.399  49.258   4.390  -0.932   0.434  C19   ZDM  21  
ZDM  C22   C22   C  0  1  N  N  N  33.438  101.500  48.856   5.461  -0.164  -0.343  C22   ZDM  22  
ZDM  C25   C25   C  0  1  N  N  N  33.885  101.062  47.427   6.812  -0.323   0.358  C25   ZDM  23  
ZDM  C28   C28   C  0  1  N  N  N  35.304  101.274  47.075   7.883   0.445  -0.419  C28   ZDM  24  
ZDM  C31   C31   C  0  1  N  N  N  35.984  100.390  46.144   9.233   0.286   0.282  C31   ZDM  25  
ZDM  C34   C34   C  0  1  N  N  N  36.540  100.952  44.880  10.305   1.054  -0.496  C34   ZDM  26  
ZDM  O49   O49   O  0  1  N  N  N  32.080  102.395  53.480   0.199  -3.667   0.564  O49   ZDM  27  
ZDM  O55   O55   O  0  1  N  N  N  31.047  102.822  55.915  -2.553  -2.946   0.856  O55   ZDM  28  
ZDM  C57   C57   C  0  1  N  N  N  26.733  101.820  54.139  -1.398   1.625  -0.534  C57   ZDM  29  
ZDM  O61   O61   O  0  1  N  N  N  25.983  101.253  53.106  -0.491   2.398  -1.324  O61   ZDM  30  
ZDM  C20   C20   C  0  1  N  N  N  36.952   99.801  43.944  11.655   0.895   0.205  C20   ZDM  31  
ZDM  C21   C21   C  0  1  N  N  N  38.124  100.256  43.055  12.726   1.663  -0.572  C21   ZDM  32  
ZDM  H1    H1    H  0  1  N  N  N  30.322  103.462  53.418  -0.235  -2.007   1.717  H1    ZDM  33  
ZDM  H2    H2    H  0  1  N  N  N  30.439  100.983  55.172  -1.641  -2.512  -0.948  H2    ZDM  34  
ZDM  HO2   HO2   H  0  1  N  N  N  29.278  105.771  60.627  -7.034   2.872  -1.255  HO2   ZDM  35  
ZDM  H3    H3    H  0  1  N  N  N  28.779  103.374  54.937  -2.098  -0.360   1.171  H3    ZDM  36  
ZDM  HO3   HO3   H  0  1  N  N  N  28.336  100.388  58.288  -5.428  -2.808  -0.983  HO3   ZDM  37  
ZDM  H4    H4    H  0  1  N  N  N  28.354  100.415  54.335  -1.008  -0.160  -1.675  H4    ZDM  38  
ZDM  HO4   HO4   H  0  1  N  N  N  31.624  103.338  60.387  -7.272  -0.329  -2.478  HO4   ZDM  39  
ZDM  H5    H5    H  0  1  N  N  N  30.285  101.635  57.932  -6.557  -1.119   0.273  H5    ZDM  40  
ZDM  H6    H6    H  0  1  N  N  N  30.299  100.481  52.825   0.770  -1.733  -1.154  H6    ZDM  41  
ZDM  H101  H101  H  0  0  N  N  N  27.028  107.138  58.768  -3.533   3.416   3.177  H101  ZDM  42  
ZDM  H7    H7    H  0  1  N  N  N  29.484  102.368  60.543  -5.188   0.637  -1.817  H7    ZDM  43  
ZDM  H8    H8    H  0  1  N  N  N  29.794  104.625  58.702  -6.888   1.383   0.609  H8    ZDM  44  
ZDM  H9    H9    H  0  1  N  N  N  27.396  103.371  60.016  -3.912   1.792   0.056  H9    ZDM  45  
ZDM  H10   H10   H  0  1  N  N  N  29.383  103.549  57.060  -4.260  -1.710   0.955  H10   ZDM  46  
ZDM  H11   H11   H  0  1  N  N  N  27.745  105.829  60.403  -5.593   2.392   2.532  H11   ZDM  47  
ZDM  H16   H16   H  0  1  N  N  N  26.197  105.268  59.614  -5.060   3.614   1.351  H16   ZDM  48  
ZDM  H18   H18   H  0  1  N  N  N  32.481  101.442  51.305   3.107  -1.170  -1.280  H18   ZDM  49  
ZDM  H18A  H18A  H  0  0  N  N  N  31.401  100.059  50.799   2.772   0.283  -0.306  H18A  ZDM  50  
ZDM  H19   H19   H  0  1  N  N  N  31.527  100.564  48.681   4.322  -0.536   1.447  H19   ZDM  51  
ZDM  H19A  H19A  H  0  0  N  N  N  31.490  102.363  48.996   4.656  -1.988   0.474  H19A  ZDM  52  
ZDM  H22   H22   H  0  1  N  N  N  33.710  102.562  48.950   5.529  -0.561  -1.356  H22   ZDM  53  
ZDM  H20   H20   H  0  1  N  N  N  33.990  100.859  49.560   5.194   0.892  -0.383  H20   ZDM  54  
ZDM  H25   H25   H  0  1  N  N  N  33.690   99.983  47.345   6.744   0.073   1.371  H25   ZDM  55  
ZDM  H221  H221  H  0  0  N  N  N  33.285  101.641  46.710   7.078  -1.379   0.398  H221  ZDM  56  
ZDM  H28   H28   H  0  1  N  N  N  35.355  102.277  46.627   7.950   0.049  -1.433  H28   ZDM  57  
ZDM  H28A  H28A  H  0  0  N  N  N  35.861  101.199  48.020   7.616   1.501  -0.459  H28A  ZDM  58  
ZDM  H31   H31   H  0  1  N  N  N  36.835   99.959  46.692   9.166   0.682   1.295  H31   ZDM  59  
ZDM  H26   H26   H  0  1  N  N  N  35.248   99.629  45.847   9.500  -0.770   0.322  H26   ZDM  60  
ZDM  H34   H34   H  0  1  N  N  N  35.776  101.570  44.386  10.372   0.658  -1.509  H34   ZDM  61  
ZDM  H34A  H34A  H  0  0  N  N  N  37.420  101.571  45.110  10.038   2.110  -0.535  H34A  ZDM  62  
ZDM  HO49  HO49  H  0  0  N  N  N  32.326  102.647  52.598   1.085  -3.829   0.915  HO49  ZDM  63  
ZDM  HO55  HO55  H  0  0  N  N  N  30.798  102.585  56.801  -2.346  -3.891   0.876  HO55  ZDM  64  
ZDM  H57   H57   H  0  1  N  N  N  26.329  101.461  55.097  -2.413   1.767  -0.904  H57   ZDM  65  
ZDM  H57A  H57A  H  0  0  N  N  N  26.646  102.914  54.069  -1.341   1.949   0.505  H57A  ZDM  66  
ZDM  HO61  HO61  H  0  0  N  N  N  25.074  101.514  53.194  -0.670   3.348  -1.312  HO61  ZDM  67  
ZDM  H341  H341  H  0  0  N  N  N  37.263   98.934  44.545  11.588   1.291   1.219  H341  ZDM  68  
ZDM  H35   H35   H  0  1  N  N  N  36.098   99.521  43.310  11.922  -0.161   0.245  H35   ZDM  69  
ZDM  H36   H36   H  0  1  N  N  N  37.813  101.123  42.454  12.794   1.267  -1.585  H36   ZDM  70  
ZDM  H37   H37   H  0  1  N  N  N  38.978  100.536  43.689  12.460   2.719  -0.612  H37   ZDM  71  
ZDM  H38   H38   H  0  1  N  N  N  38.418   99.434  42.386  13.689   1.550  -0.073  H38   ZDM  72  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ZDM  C1   C2    SING  N  N   1  
ZDM  O1   C9    SING  N  N   2  
ZDM  C2   C3    SING  N  N   3  
ZDM  C2   O55   SING  N  N   4  
ZDM  C3   O7    SING  N  N   5  
ZDM  C4   C3    SING  N  N   6  
ZDM  C4   C57   SING  N  N   7  
ZDM  C5   O3    SING  N  N   8  
ZDM  C5   C7    SING  N  N   9  
ZDM  O5   C4    SING  N  N  10  
ZDM  C6   C1    SING  N  N  11  
ZDM  C6   O5    SING  N  N  12  
ZDM  O6   C11   SING  N  N  13  
ZDM  C7   O4    SING  N  N  14  
ZDM  O7   C10   SING  N  N  15  
ZDM  C8   O2    SING  N  N  16  
ZDM  C8   C7    SING  N  N  17  
ZDM  C9   C8    SING  N  N  18  
ZDM  C9   C11   SING  N  N  19  
ZDM  C10  O1    SING  N  N  20  
ZDM  C10  C5    SING  N  N  21  
ZDM  O16  C6    SING  N  N  22  
ZDM  C18  O16   SING  N  N  23  
ZDM  C19  C18   SING  N  N  24  
ZDM  C22  C19   SING  N  N  25  
ZDM  C25  C22   SING  N  N  26  
ZDM  C28  C25   SING  N  N  27  
ZDM  C31  C28   SING  N  N  28  
ZDM  C34  C31   SING  N  N  29  
ZDM  C34  C20   SING  N  N  30  
ZDM  O49  C1    SING  N  N  31  
ZDM  O61  C57   SING  N  N  32  
ZDM  C20  C21   SING  N  N  33  
ZDM  C21  H38   SING  N  N  34  
ZDM  C1   H1    SING  N  N  35  
ZDM  C2   H2    SING  N  N  36  
ZDM  O2   HO2   SING  N  N  37  
ZDM  C3   H3    SING  N  N  38  
ZDM  O3   HO3   SING  N  N  39  
ZDM  C4   H4    SING  N  N  40  
ZDM  O4   HO4   SING  N  N  41  
ZDM  C5   H5    SING  N  N  42  
ZDM  C6   H6    SING  N  N  43  
ZDM  O6   H101  SING  N  N  44  
ZDM  C7   H7    SING  N  N  45  
ZDM  C8   H8    SING  N  N  46  
ZDM  C9   H9    SING  N  N  47  
ZDM  C10  H10   SING  N  N  48  
ZDM  C11  H11   SING  N  N  49  
ZDM  C11  H16   SING  N  N  50  
ZDM  C18  H18   SING  N  N  51  
ZDM  C18  H18A  SING  N  N  52  
ZDM  C19  H19   SING  N  N  53  
ZDM  C19  H19A  SING  N  N  54  
ZDM  C22  H22   SING  N  N  55  
ZDM  C22  H20   SING  N  N  56  
ZDM  C25  H25   SING  N  N  57  
ZDM  C25  H221  SING  N  N  58  
ZDM  C28  H28   SING  N  N  59  
ZDM  C28  H28A  SING  N  N  60  
ZDM  C31  H31   SING  N  N  61  
ZDM  C31  H26   SING  N  N  62  
ZDM  C34  H34   SING  N  N  63  
ZDM  C34  H34A  SING  N  N  64  
ZDM  O49  HO49  SING  N  N  65  
ZDM  O55  HO55  SING  N  N  66  
ZDM  C57  H57   SING  N  N  67  
ZDM  C57  H57A  SING  N  N  68  
ZDM  O61  HO61  SING  N  N  69  
ZDM  C20  H341  SING  N  N  70  
ZDM  C20  H35   SING  N  N  71  
ZDM  C21  H36   SING  N  N  72  
ZDM  C21  H37   SING  N  N  73  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ZDM  SMILES            ACDLabs               12.01  "O(CCCCCCCCC)C2OC(C(OC1OC(CO)C(O)C(O)C1O)C(O)C2O)CO"  
ZDM  SMILES_CANONICAL  CACTVS                3.370  "CCCCCCCCCO[C@@H]1O[C@H](CO)[C@@H](O[C@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@H](O)[C@H]1O"  
ZDM  SMILES            CACTVS                3.370  "CCCCCCCCCO[CH]1O[CH](CO)[CH](O[CH]2O[CH](CO)[CH](O)[CH](O)[CH]2O)[CH](O)[CH]1O"  
ZDM  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "CCCCCCCCCO[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O[C@@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)O)O"  
ZDM  SMILES            "OpenEye OEToolkits"  1.7.0  "CCCCCCCCCOC1C(C(C(C(O1)CO)OC2C(C(C(C(O2)CO)O)O)O)O)O"  
ZDM  InChI             InChI                 1.03   "InChI=1S/C21H40O11/c1-2-3-4-5-6-7-8-9-29-20-18(28)16(26)19(13(11-23)31-20)32-21-17(27)15(25)14(24)12(10-22)30-21/h12-28H,2-11H2,1H3/t12-,13-,14-,15+,16-,17-,18-,19-,20-,21-/m1/s1"  
ZDM  InChIKey          InChI                 1.03   KCCBGPCYGBPHBR-ZESVGKPKSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
ZDM  "SYSTEMATIC NAME"  ACDLabs               12.01  "nonyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside"  
ZDM  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.0  "(2R,3R,4S,5S,6R)-2-[(2R,3S,4R,5R,6R)-4,5-dihydroxy-2-(hydroxymethyl)-6-nonoxy-oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ZDM  "Create component"   2011-03-03  RCSB  
ZDM  "Modify descriptor"  2011-06-04  RCSB  
ZDM  "Modify synonyms"    2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     ZDM
_pdbx_chem_comp_synonyms.name        nonyl-beta-D-maltoside
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
