data_6WN
#

_chem_comp.id                                   6WN
_chem_comp.name                                 
;(8~{R},9~{S},13~{S},14~{S},16~{E})-13-methyl-3-oxidanyl-16-(phenylmethylidene)-6,7,8,9,11,12,14,15-octahydrocyclopenta[
a]phenanthren-17-one
;

_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C25 H26 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "16-benzylidene estrone"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2016-07-11
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       358.473
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    6WN
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5KRH
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
6WN  O01  O1   O  0  1  N  N  N  -22.302  -27.831   -7.657  -2.295  -3.421   0.065  O01  6WN   1  
6WN  C01  C1   C  0  1  N  N  N  -21.129  -27.471   -7.578  -1.870  -2.284   0.089  C01  6WN   2  
6WN  C02  C2   C  0  1  N  N  S  -20.572  -26.626   -6.608  -0.438  -1.875   0.222  C02  6WN   3  
6WN  C03  C3   C  0  1  N  N  N  -20.488  -25.153   -7.066  -0.120  -1.630   1.699  C03  6WN   4  
6WN  C04  C4   C  0  1  N  N  N  -21.362  -26.831   -5.317   0.626  -2.778  -0.357  C04  6WN   5  
6WN  C05  C5   C  0  1  N  N  N  -20.738  -25.947   -4.302   1.992  -2.129  -0.064  C05  6WN   6  
6WN  C06  C6   C  0  1  N  N  S  -19.223  -26.508   -4.226   2.053  -0.717  -0.628  C06  6WN   7  
6WN  C07  C7   C  0  1  Y  N  N  -18.494  -25.959   -3.168   3.368  -0.054  -0.333  C07  6WN   8  
6WN  C08  C8   C  0  1  Y  N  N  -19.119  -25.676   -1.959   4.508  -0.845  -0.292  C08  6WN   9  
6WN  C09  C9   C  0  1  Y  N  N  -18.396  -25.162   -0.891   5.741  -0.286  -0.034  C09  6WN  10  
6WN  C10  C10  C  0  1  Y  N  N  -17.032  -24.948   -1.017   5.844   1.081   0.185  C10  6WN  11  
6WN  O02  O2   O  0  1  N  N  N  -16.321  -24.441    0.029   7.056   1.643   0.434  O02  6WN  12  
6WN  C11  C11  C  0  1  Y  N  N  -16.394  -25.249   -2.217   4.706   1.868   0.148  C11  6WN  13  
6WN  C12  C12  C  0  1  Y  N  N  -17.114  -25.791   -3.273   3.463   1.303  -0.106  C12  6WN  14  
6WN  C13  C13  C  0  1  N  N  N  -16.466  -26.037   -4.474   2.267   2.218  -0.101  C13  6WN  15  
6WN  C14  C14  C  0  1  N  N  N  -17.207  -27.026   -5.348   1.049   1.542  -0.729  C14  6WN  16  
6WN  C15  C15  C  0  1  N  N  R  -18.553  -26.414   -5.601   0.899   0.153  -0.110  C15  6WN  17  
6WN  C16  C16  C  0  1  N  N  S  -19.437  -27.302   -6.501  -0.387  -0.520  -0.542  C16  6WN  18  
6WN  C17  C17  C  0  1  N  N  N  -18.887  -27.264   -7.868  -1.689   0.106  -0.024  C17  6WN  19  
6WN  C18  C18  C  0  1  N  N  N  -20.071  -27.913   -8.350  -2.642  -1.089  -0.011  C18  6WN  20  
6WN  C19  C19  C  0  1  N  N  N  -20.174  -28.814   -9.321  -3.993  -1.024  -0.075  C19  6WN  21  
6WN  C20  C20  C  0  1  Y  N  N  -19.109  -29.142  -10.166  -4.670   0.280  -0.009  C20  6WN  22  
6WN  C21  C21  C  0  1  Y  N  N  -18.039  -28.265  -10.366  -5.973   0.421  -0.500  C21  6WN  23  
6WN  C22  C22  C  0  1  Y  N  N  -17.038  -28.566  -11.276  -6.601   1.646  -0.434  C22  6WN  24  
6WN  C23  C23  C  0  1  Y  N  N  -17.117  -29.704  -12.047  -5.946   2.735   0.116  C23  6WN  25  
6WN  C24  C24  C  0  1  Y  N  N  -18.208  -30.551  -11.905  -4.657   2.604   0.603  C24  6WN  26  
6WN  C25  C25  C  0  1  Y  N  N  -19.230  -30.237  -11.017  -4.017   1.384   0.550  C25  6WN  27  
6WN  H1   H1   H  0  1  N  N  N  -20.044  -24.544   -6.265  -0.226  -2.562   2.253  H1   6WN  28  
6WN  H2   H2   H  0  1  N  N  N  -19.862  -25.085   -7.968   0.902  -1.264   1.794  H2   6WN  29  
6WN  H3   H3   H  0  1  N  N  N  -21.498  -24.781   -7.292  -0.811  -0.888   2.100  H3   6WN  30  
6WN  H4   H4   H  0  1  N  N  N  -22.416  -26.554   -5.467   0.574  -3.761   0.112  H4   6WN  31  
6WN  H5   H5   H  0  1  N  N  N  -21.301  -27.881   -4.996   0.485  -2.873  -1.434  H5   6WN  32  
6WN  H6   H6   H  0  1  N  N  N  -20.756  -24.896   -4.626   2.147  -2.091   1.015  H6   6WN  33  
6WN  H7   H7   H  0  1  N  N  N  -21.245  -26.040   -3.330   2.780  -2.730  -0.517  H7   6WN  34  
6WN  H8   H8   H  0  1  N  N  N  -19.332  -27.583   -4.022   1.947  -0.784  -1.710  H8   6WN  35  
6WN  H9   H9   H  0  1  N  N  N  -20.178  -25.858   -1.849   4.428  -1.909  -0.464  H9   6WN  36  
6WN  H10  H10  H  0  1  N  N  N  -18.896  -24.929    0.038   6.624  -0.908  -0.002  H10  6WN  37  
6WN  H11  H11  H  0  1  N  N  N  -16.902  -24.293    0.766   7.524   1.936  -0.359  H11  6WN  38  
6WN  H12  H12  H  0  1  N  N  N  -15.336  -25.060   -2.327   4.786   2.931   0.318  H12  6WN  39  
6WN  H13  H13  H  0  1  N  N  N  -15.466  -26.440   -4.258   2.032   2.493   0.927  H13  6WN  40  
6WN  H14  H14  H  0  1  N  N  N  -16.369  -25.088   -5.022   2.505   3.119  -0.666  H14  6WN  41  
6WN  H15  H15  H  0  1  N  N  N  -17.315  -27.990   -4.830   0.155   2.133  -0.526  H15  6WN  42  
6WN  H16  H16  H  0  1  N  N  N  -16.670  -27.178   -6.296   1.193   1.452  -1.806  H16  6WN  43  
6WN  H17  H17  H  0  1  N  N  N  -18.491  -25.379   -5.968   0.945   0.223   0.976  H17  6WN  44  
6WN  H18  H18  H  0  1  N  N  N  -19.527  -28.324   -6.104  -0.410  -0.669  -1.622  H18  6WN  45  
6WN  H19  H19  H  0  1  N  N  N  -17.966  -27.851   -8.000  -1.553   0.510   0.979  H19  6WN  46  
6WN  H20  H20  H  0  1  N  N  N  -18.736  -26.249   -8.265  -2.045   0.879  -0.706  H20  6WN  47  
6WN  H21  H21  H  0  1  N  N  N  -21.120  -29.314   -9.464  -4.573  -1.929  -0.175  H21  6WN  48  
6WN  H22  H22  H  0  1  N  N  N  -17.992  -27.343   -9.805  -6.485  -0.427  -0.929  H22  6WN  49  
6WN  H23  H23  H  0  1  N  N  N  -16.191  -27.904  -11.381  -7.606   1.757  -0.813  H23  6WN  50  
6WN  H24  H24  H  0  1  N  N  N  -16.337  -29.936  -12.757  -6.442   3.694   0.160  H24  6WN  51  
6WN  H25  H25  H  0  1  N  N  N  -18.263  -31.459  -12.488  -4.154   3.458   1.030  H25  6WN  52  
6WN  H26  H26  H  0  1  N  N  N  -20.122  -30.845  -10.987  -3.012   1.283   0.931  H26  6WN  53  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
6WN  C23  C24  DOUB  Y  N   1  
6WN  C23  C22  SING  Y  N   2  
6WN  C24  C25  SING  Y  N   3  
6WN  C22  C21  DOUB  Y  N   4  
6WN  C25  C20  DOUB  Y  N   5  
6WN  C21  C20  SING  Y  N   6  
6WN  C20  C19  SING  N  N   7  
6WN  C19  C18  DOUB  N  E   8  
6WN  C18  C17  SING  N  N   9  
6WN  C18  C01  SING  N  N  10  
6WN  C17  C16  SING  N  N  11  
6WN  O01  C01  DOUB  N  N  12  
6WN  C01  C02  SING  N  N  13  
6WN  C03  C02  SING  N  N  14  
6WN  C02  C16  SING  N  N  15  
6WN  C02  C04  SING  N  N  16  
6WN  C16  C15  SING  N  N  17  
6WN  C15  C14  SING  N  N  18  
6WN  C15  C06  SING  N  N  19  
6WN  C14  C13  SING  N  N  20  
6WN  C04  C05  SING  N  N  21  
6WN  C13  C12  SING  N  N  22  
6WN  C05  C06  SING  N  N  23  
6WN  C06  C07  SING  N  N  24  
6WN  C12  C07  DOUB  Y  N  25  
6WN  C12  C11  SING  Y  N  26  
6WN  C07  C08  SING  Y  N  27  
6WN  C11  C10  DOUB  Y  N  28  
6WN  C08  C09  DOUB  Y  N  29  
6WN  C10  C09  SING  Y  N  30  
6WN  C10  O02  SING  N  N  31  
6WN  C03  H1   SING  N  N  32  
6WN  C03  H2   SING  N  N  33  
6WN  C03  H3   SING  N  N  34  
6WN  C04  H4   SING  N  N  35  
6WN  C04  H5   SING  N  N  36  
6WN  C05  H6   SING  N  N  37  
6WN  C05  H7   SING  N  N  38  
6WN  C06  H8   SING  N  N  39  
6WN  C08  H9   SING  N  N  40  
6WN  C09  H10  SING  N  N  41  
6WN  O02  H11  SING  N  N  42  
6WN  C11  H12  SING  N  N  43  
6WN  C13  H13  SING  N  N  44  
6WN  C13  H14  SING  N  N  45  
6WN  C14  H15  SING  N  N  46  
6WN  C14  H16  SING  N  N  47  
6WN  C15  H17  SING  N  N  48  
6WN  C16  H18  SING  N  N  49  
6WN  C17  H19  SING  N  N  50  
6WN  C17  H20  SING  N  N  51  
6WN  C19  H21  SING  N  N  52  
6WN  C21  H22  SING  N  N  53  
6WN  C22  H23  SING  N  N  54  
6WN  C23  H24  SING  N  N  55  
6WN  C24  H25  SING  N  N  56  
6WN  C25  H26  SING  N  N  57  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
6WN  InChI             InChI                 1.03   "InChI=1S/C25H26O2/c1-25-12-11-21-20-10-8-19(26)14-17(20)7-9-22(21)23(25)15-18(24(25)27)13-16-5-3-2-4-6-16/h2-6,8,10,13-14,21-23,26H,7,9,11-12,15H2,1H3/b18-13+/t21-,22-,23+,25+/m1/s1"  
6WN  InChIKey          InChI                 1.03   QXZFHNQLOFFUHO-XCFFBTTBSA-N  
6WN  SMILES_CANONICAL  CACTVS                3.385  "C[C@]12CC[C@H]3[C@@H](CCc4cc(O)ccc34)[C@@H]1CC(=C/c5ccccc5)\C2=O"  
6WN  SMILES            CACTVS                3.385  "C[C]12CC[CH]3[CH](CCc4cc(O)ccc34)[CH]1CC(=Cc5ccccc5)C2=O"  
6WN  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.5  "C[C@]12CC[C@@H]3c4ccc(cc4CC[C@H]3[C@@H]1C/C(=C\c5ccccc5)/C2=O)O"  
6WN  SMILES            "OpenEye OEToolkits"  2.0.5  "CC12CCC3c4ccc(cc4CCC3C1CC(=Cc5ccccc5)C2=O)O"  
#
_pdbx_chem_comp_identifier.comp_id          6WN
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.5
_pdbx_chem_comp_identifier.identifier       "(8~{R},9~{S},13~{S},14~{S},16~{E})-13-methyl-3-oxidanyl-16-(phenylmethylidene)-6,7,8,9,11,12,14,15-octahydrocyclopenta[a]phenanthren-17-one"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
6WN  "Create component"  2016-07-11  RCSB  
6WN  "Initial release"   2017-02-15  RCSB  
6WN  "Modify synonyms"   2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     6WN
_pdbx_chem_comp_synonyms.name        "16-benzylidene estrone"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
