data_DWN
# 
_chem_comp.id                                    DWN 
_chem_comp.name                                  "(2R,4S,6R)-4-amino-6-methyl-5-oxotetrahydro-2H-pyran-2-yl [(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrofuran-2-yl]methyl dihydrogen diphosphate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C16 H25 N3 O13 P2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-03-12 
_chem_comp.pdbx_modified_date                    2012-05-16 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        529.330 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     DWN 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4E32 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
DWN O4  O4  O 0 1 N N N 19.656 18.003 1.129  8.299  -2.822 -1.012 O4  DWN 1  
DWN C4  C4  C 0 1 N N N 20.284 16.983 1.434  7.569  -1.963 -0.580 C4  DWN 2  
DWN C5  C5  C 0 1 N N R 21.320 16.459 0.477  6.605  -2.251 0.552  C5  DWN 3  
DWN C6  C6  C 0 1 N N N 22.587 17.314 0.353  7.082  -1.551 1.826  C6  DWN 4  
DWN O5  O5  O 0 1 N N N 21.863 15.216 0.878  5.314  -1.755 0.182  O5  DWN 5  
DWN C3  C3  C 0 1 N N S 20.139 16.250 2.737  7.590  -0.558 -1.148 C3  DWN 6  
DWN N3  N3  N 0 1 N N N 18.957 16.738 3.410  8.365  -0.539 -2.396 N3  DWN 7  
DWN C2  C2  C 0 1 N N N 20.296 14.734 2.718  6.141  -0.139 -1.429 C2  DWN 8  
DWN C1  C1  C 0 1 N N R 20.895 14.290 1.380  5.301  -0.370 -0.167 C1  DWN 9  
DWN O1  O1  O 0 1 N N N 19.828 14.174 0.446  3.955  0.047  -0.406 O1  DWN 10 
DWN P2  P2  P 0 1 N N N 19.889 12.991 -0.650 2.999  0.630  0.751  P2  DWN 11 
DWN O3P O3P O 0 1 N N N 20.012 11.685 0.122  2.710  -0.521 1.839  O3P DWN 12 
DWN O4P O4P O 0 1 N N N 18.748 13.201 -1.616 3.664  1.776  1.410  O4P DWN 13 
DWN OPP OPP O 0 1 N N N 21.287 13.276 -1.383 1.608  1.116  0.102  OPP DWN 14 
DWN P   P   P 0 1 N N N 22.030 12.644 -2.676 0.441  2.117  0.580  P   DWN 15 
DWN O1P O1P O 0 1 N N N 23.391 13.307 -2.694 0.891  3.638  0.302  O1P DWN 16 
DWN O2P O2P O 0 1 N N N 21.189 12.829 -3.891 0.195  1.933  2.028  O2P DWN 17 
DWN O5X O5X O 0 1 N N N 22.121 11.110 -2.226 -0.909 1.798  -0.238 O5X DWN 18 
DWN C5X C5X C 0 1 N N N 22.748 10.211 -3.137 -2.153 2.447  0.030  C5X DWN 19 
DWN C4X C4X C 0 1 N N R 22.596 8.823  -2.536 -3.223 1.912  -0.924 C4X DWN 20 
DWN O4X O4X O 0 1 N N N 22.997 7.959  -3.598 -3.548 0.543  -0.600 O4X DWN 21 
DWN C3X C3X C 0 1 N N S 23.568 8.624  -1.380 -4.546 2.687  -0.737 C3X DWN 22 
DWN O3X O3X O 0 1 N N N 22.931 7.723  -0.456 -4.678 3.701  -1.735 O3X DWN 23 
DWN C2X C2X C 0 1 N N N 24.725 7.940  -2.071 -5.640 1.610  -0.912 C2X DWN 24 
DWN C1X C1X C 0 1 N N R 24.142 7.193  -3.261 -4.848 0.312  -1.184 C1X DWN 25 
DWN N11 N11 N 0 1 N N N 25.103 7.272  -4.369 -5.502 -0.829 -0.539 N11 DWN 26 
DWN C21 C21 C 0 1 N N N 25.545 6.123  -4.897 -5.635 -0.851 0.800  C21 DWN 27 
DWN O21 O21 O 0 1 N N N 25.099 5.028  -4.506 -5.210 0.078  1.460  O21 DWN 28 
DWN N31 N31 N 0 1 N N N 26.397 6.122  -5.949 -6.232 -1.886 1.419  N31 DWN 29 
DWN C61 C61 C 0 1 N N N 25.562 8.471  -4.776 -5.977 -1.860 -1.303 C61 DWN 30 
DWN C51 C51 C 0 1 N N N 26.490 8.559  -5.801 -6.580 -2.911 -0.708 C51 DWN 31 
DWN C5A C5A C 0 1 N N N 27.032 9.881  -6.280 -7.109 -4.056 -1.533 C5A DWN 32 
DWN C41 C41 C 0 1 N N N 26.953 7.273  -6.385 -6.708 -2.924 0.702  C41 DWN 33 
DWN O41 O41 O 0 1 N N N 27.774 7.245  -7.329 -7.249 -3.861 1.261  O41 DWN 34 
DWN H1  H1  H 0 1 N N N 20.865 16.366 -0.520 6.550  -3.326 0.722  H1  DWN 35 
DWN H2  H2  H 0 1 N N N 22.313 18.333 0.040  6.375  -1.745 2.633  H2  DWN 36 
DWN H3  H3  H 0 1 N N N 23.099 17.354 1.326  8.064  -1.931 2.104  H3  DWN 37 
DWN H4  H4  H 0 1 N N N 23.258 16.868 -0.396 7.144  -0.477 1.648  H4  DWN 38 
DWN H5  H5  H 0 1 N N N 20.983 16.603 3.348  8.038  0.124  -0.426 H5  DWN 39 
DWN H6  H6  H 0 1 N N N 18.847 16.259 4.281  9.316  -0.836 -2.236 H6  DWN 40 
DWN H7  H7  H 0 1 N N N 19.051 17.719 3.579  7.923  -1.107 -3.104 H7  DWN 41 
DWN H9  H9  H 0 1 N N N 19.311 14.263 2.851  6.113  0.916  -1.701 H9  DWN 42 
DWN H10 H10 H 0 1 N N N 20.963 14.426 3.537  5.742  -0.737 -2.249 H10 DWN 43 
DWN H11 H11 H 0 1 N N N 21.367 13.307 1.525  5.719  0.214  0.653  H11 DWN 44 
DWN H12 H12 H 0 1 N N N 19.296 11.108 -0.115 2.274  -1.305 1.477  H12 DWN 45 
DWN H13 H13 H 0 1 N N N 23.510 13.764 -3.518 1.069  3.831  -0.628 H13 DWN 46 
DWN H14 H14 H 0 1 N N N 23.813 10.463 -3.250 -2.453 2.247  1.059  H14 DWN 47 
DWN H15 H15 H 0 1 N N N 22.254 10.257 -4.119 -2.042 3.521  -0.114 H15 DWN 48 
DWN H16 H16 H 0 1 N N N 21.559 8.643  -2.215 -2.881 1.988  -1.957 H16 DWN 49 
DWN H17 H17 H 0 1 N N N 23.864 9.579  -0.922 -4.595 3.125  0.260  H17 DWN 50 
DWN H18 H18 H 0 1 N N N 23.506 7.570  0.285  -5.492 4.219  -1.665 H18 DWN 51 
DWN H19 H19 H 0 1 N N N 25.214 7.235  -1.383 -6.230 1.514  -0.001 H19 DWN 52 
DWN H20 H20 H 0 1 N N N 25.457 8.686  -2.413 -6.283 1.852  -1.759 H20 DWN 53 
DWN H21 H21 H 0 1 N N N 23.899 6.153  -2.999 -4.757 0.141  -2.257 H21 DWN 54 
DWN H22 H22 H 0 1 N N N 26.617 5.261  -6.408 -6.319 -1.886 2.385  H22 DWN 55 
DWN H23 H23 H 0 1 N N N 25.204 9.371  -4.299 -5.871 -1.832 -2.378 H23 DWN 56 
DWN H24 H24 H 0 1 N N N 26.557 10.698 -5.717 -6.329 -4.807 -1.654 H24 DWN 57 
DWN H25 H25 H 0 1 N N N 28.120 9.910  -6.121 -7.967 -4.501 -1.030 H25 DWN 58 
DWN H26 H26 H 0 1 N N N 26.815 9.999  -7.352 -7.413 -3.687 -2.513 H26 DWN 59 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DWN O41 C41 DOUB N N 1  
DWN C41 N31 SING N N 2  
DWN C41 C51 SING N N 3  
DWN C5A C51 SING N N 4  
DWN N31 C21 SING N N 5  
DWN C51 C61 DOUB N N 6  
DWN C21 O21 DOUB N N 7  
DWN C21 N11 SING N N 8  
DWN C61 N11 SING N N 9  
DWN N11 C1X SING N N 10 
DWN O2P P   DOUB N N 11 
DWN O4X C1X SING N N 12 
DWN O4X C4X SING N N 13 
DWN C1X C2X SING N N 14 
DWN C5X C4X SING N N 15 
DWN C5X O5X SING N N 16 
DWN O1P P   SING N N 17 
DWN P   O5X SING N N 18 
DWN P   OPP SING N N 19 
DWN C4X C3X SING N N 20 
DWN C2X C3X SING N N 21 
DWN O4P P2  DOUB N N 22 
DWN OPP P2  SING N N 23 
DWN C3X O3X SING N N 24 
DWN P2  O3P SING N N 25 
DWN P2  O1  SING N N 26 
DWN C6  C5  SING N N 27 
DWN O1  C1  SING N N 28 
DWN C5  O5  SING N N 29 
DWN C5  C4  SING N N 30 
DWN O5  C1  SING N N 31 
DWN O4  C4  DOUB N N 32 
DWN C1  C2  SING N N 33 
DWN C4  C3  SING N N 34 
DWN C2  C3  SING N N 35 
DWN C3  N3  SING N N 36 
DWN C5  H1  SING N N 37 
DWN C6  H2  SING N N 38 
DWN C6  H3  SING N N 39 
DWN C6  H4  SING N N 40 
DWN C3  H5  SING N N 41 
DWN N3  H6  SING N N 42 
DWN N3  H7  SING N N 43 
DWN C2  H9  SING N N 44 
DWN C2  H10 SING N N 45 
DWN C1  H11 SING N N 46 
DWN O3P H12 SING N N 47 
DWN O1P H13 SING N N 48 
DWN C5X H14 SING N N 49 
DWN C5X H15 SING N N 50 
DWN C4X H16 SING N N 51 
DWN C3X H17 SING N N 52 
DWN O3X H18 SING N N 53 
DWN C2X H19 SING N N 54 
DWN C2X H20 SING N N 55 
DWN C1X H21 SING N N 56 
DWN N31 H22 SING N N 57 
DWN C61 H23 SING N N 58 
DWN C5A H24 SING N N 59 
DWN C5A H25 SING N N 60 
DWN C5A H26 SING N N 61 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
DWN SMILES           ACDLabs              12.01 "O=C1C(=CN(C(=O)N1)C2OC(C(O)C2)COP(=O)(OP(=O)(OC3OC(C(=O)C(N)C3)C)O)O)C" 
DWN InChI            InChI                1.03  
"InChI=1S/C16H25N3O13P2/c1-7-5-19(16(23)18-15(7)22)12-4-10(20)11(30-12)6-28-33(24,25)32-34(26,27)31-13-3-9(17)14(21)8(2)29-13/h5,8-13,20H,3-4,6,17H2,1-2H3,(H,24,25)(H,26,27)(H,18,22,23)/t8-,9+,10+,11-,12-,13-/m1/s1" 
DWN InChIKey         InChI                1.03  IVWGOICUSBJICO-KISRQWFGSA-N 
DWN SMILES_CANONICAL CACTVS               3.370 "C[C@H]1O[C@@H](C[C@H](N)C1=O)O[P](O)(=O)O[P](O)(=O)OC[C@H]2O[C@H](C[C@@H]2O)N3C=C(C)C(=O)NC3=O" 
DWN SMILES           CACTVS               3.370 "C[CH]1O[CH](C[CH](N)C1=O)O[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH](C[CH]2O)N3C=C(C)C(=O)NC3=O" 
DWN SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@@H]1C(=O)[C@H](C[C@H](O1)OP(=O)(O)OP(=O)(O)OC[C@@H]2[C@H](C[C@@H](O2)N3C=C(C(=O)NC3=O)C)O)N" 
DWN SMILES           "OpenEye OEToolkits" 1.7.6 "CC1C(=O)C(CC(O1)OP(=O)(O)OP(=O)(O)OCC2C(CC(O2)N3C=C(C(=O)NC3=O)C)O)N" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
DWN "SYSTEMATIC NAME" ACDLabs              12.01 
"(2R,4S,6R)-4-amino-6-methyl-5-oxotetrahydro-2H-pyran-2-yl [(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrofuran-2-yl]methyl dihydrogen diphosphate (non-preferred name)" 
DWN "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2R,4S,6R)-4-azanyl-6-methyl-5-oxidanylidene-oxan-2-yl] [[(2R,3S,5R)-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] hydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
DWN "Create component" 2012-03-12 RCSB 
DWN "Modify atom id"   2012-05-16 RCSB 
# 
