data_VFN
#

_chem_comp.id                                   VFN
_chem_comp.name                                 "~{N}-[(5-azanyl-1,3,4-oxadiazol-2-yl)methyl]-2-(2-chlorophenyl)sulfanyl-~{N}-[(4-cyanophenyl)methyl]ethanamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C19 H16 Cl N5 O2 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-05-18
_chem_comp.pdbx_modified_date                   2021-10-08
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       413.881
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    VFN
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7OK1
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
VFN  C15  C1   C   0  1  N  N  N  -31.629   7.759  37.793  -6.370  -2.833   0.992  C15  VFN   1  
VFN  C23  C2   C   0  1  Y  N  N  -37.198   8.423  33.303   4.559  -0.259   2.222  C23  VFN   2  
VFN  C24  C3   C   0  1  Y  N  N  -38.165   7.600  32.700   5.645  -1.077   1.969  C24  VFN   3  
VFN  C11  C4   C   0  1  Y  N  N  -30.481   9.150  36.158  -4.547  -2.287  -0.554  C11  VFN   4  
VFN  C13  C5   C   0  1  Y  N  N  -32.805   8.521  35.802  -5.385  -0.589   0.944  C13  VFN   5  
VFN  C10  C6   C   0  1  Y  N  N  -30.472   9.870  34.962  -3.647  -1.378  -1.069  C10  VFN   6  
VFN  C14  C7   C   0  1  Y  N  N  -32.787   9.213  34.590  -4.483   0.311   0.417  C14  VFN   7  
VFN  C22  C8   C   0  1  Y  N  N  -36.518   9.377  32.536   3.444  -0.317   1.410  C22  VFN   8  
VFN  C25  C9   C   0  1  Y  N  N  -38.464   7.745  31.338   5.622  -1.951   0.898  C25  VFN   9  
VFN  C12  C10  C   0  1  Y  N  N  -31.641   8.490  36.573  -5.428  -1.897   0.457  C12  VFN  10  
VFN  C9   C11  C   0  1  Y  N  N  -31.630   9.896  34.178  -3.614  -0.083  -0.585  C9   VFN  11  
VFN  C21  C12  C   0  1  Y  N  N  -36.800   9.535  31.169   3.416  -1.194   0.333  C21  VFN  12  
VFN  C26  C13  C   0  1  Y  N  N  -37.784   8.711  30.593   4.512  -2.011   0.077  C26  VFN  13  
VFN  C5   C14  C   0  1  Y  N  N  -33.732  12.273  34.716  -0.588   3.027   0.342  C5   VFN  14  
VFN  C2   C15  C   0  1  Y  N  N  -35.191  11.529  36.051   0.830   4.572  -0.155  C2   VFN  15  
VFN  C17  C16  C   0  1  N  N  N  -33.688  10.818  31.695  -0.401   0.008  -0.757  C17  VFN  16  
VFN  C8   C17  C   0  1  N  N  N  -31.602  10.700  32.926  -2.631   0.906  -1.157  C8   VFN  17  
VFN  C6   C18  C   0  1  N  N  N  -33.161  12.615  33.393  -1.204   1.722   0.777  C6   VFN  18  
VFN  C19  C19  C   0  1  N  N  N  -34.901  11.623  31.281   0.881  -0.046   0.032  C19  VFN  19  
VFN  N16  N1   N   0  1  N  N  N  -31.613   7.162  38.788  -7.117  -3.576   1.416  N16  VFN  20  
VFN  N4   N2   N   0  1  Y  N  N  -33.195  12.348  35.917  -1.230   4.096  -0.026  N4   VFN  21  
VFN  N3   N3   N   0  1  Y  N  N  -34.154  11.864  36.797  -0.389   5.023  -0.324  N3   VFN  22  
VFN  N1   N4   N   0  1  N  N  N  -36.404  10.993  36.385   2.001   5.274  -0.373  N1   VFN  23  
VFN  N7   N5   N   0  1  N  N  N  -32.852  11.393  32.660  -1.384   0.854  -0.389  N7   VFN  24  
VFN  O18  O1   O   0  1  N  N  N  -33.460   9.724  31.196  -0.550  -0.711  -1.723  O18  VFN  25  
VFN  O28  O2   O   0  1  Y  N  N  -34.995  11.765  34.720   0.730   3.299   0.270  O28  VFN  26  
VFN  S20  S1   S   0  1  N  N  N  -35.977  10.721  30.112   1.995  -1.272  -0.707  S20  VFN  27  
VFN  CL1  CL1  CL  0  0  N  N  N  -38.141   8.920  28.924   4.483  -3.109  -1.267  CL1  VFN  28  
VFN  H1   H1   H   0  1  N  N  N  -36.980   8.320  34.356   4.581   0.422   3.060  H1   VFN  29  
VFN  H2   H2   H   0  1  N  N  N  -38.679   6.854  33.288   6.514  -1.032   2.609  H2   VFN  30  
VFN  H3   H3   H   0  1  N  N  N  -29.589   9.103  36.765  -4.575  -3.298  -0.935  H3   VFN  31  
VFN  H4   H4   H   0  1  N  N  N  -33.701   8.020  36.137  -6.063  -0.280   1.726  H4   VFN  32  
VFN  H5   H5   H   0  1  N  N  N  -29.585  10.399  34.647  -2.965  -1.679  -1.851  H5   VFN  33  
VFN  H6   H6   H   0  1  N  N  N  -33.668   9.224  33.965  -4.449   1.323   0.793  H6   VFN  34  
VFN  H7   H7   H   0  1  N  N  N  -35.768   9.999  33.001   2.594   0.318   1.611  H7   VFN  35  
VFN  H8   H8   H   0  1  N  N  N  -39.210   7.118  30.871   6.472  -2.587   0.702  H8   VFN  36  
VFN  H9   H9   H   0  1  N  N  N  -31.390  10.026  32.083  -2.428   0.656  -2.198  H9   VFN  37  
VFN  H10  H10  H   0  1  N  N  N  -30.799  11.447  33.009  -3.051   1.911  -1.099  H10  VFN  38  
VFN  H11  H11  H   0  1  N  N  N  -32.240  13.200  33.532  -0.549   1.233   1.497  H11  VFN  39  
VFN  H12  H12  H   0  1  N  N  N  -33.890  13.209  32.823  -2.173   1.914   1.239  H12  VFN  40  
VFN  H13  H13  H   0  1  N  N  N  -34.560  12.552  30.801   1.359   0.934   0.017  H13  VFN  41  
VFN  H14  H14  H   0  1  N  N  N  -35.485  11.868  32.180   0.663  -0.327   1.062  H14  VFN  42  
VFN  H15  H15  H   0  1  N  N  N  -36.952  10.865  35.558   1.965   6.193  -0.683  H15  VFN  43  
VFN  H16  H16  H   0  1  N  N  N  -36.266  10.110  36.833   2.858   4.848  -0.218  H16  VFN  44  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
VFN  CL1  C26  SING  N  N   1  
VFN  S20  C21  SING  N  N   2  
VFN  S20  C19  SING  N  N   3  
VFN  C26  C21  DOUB  Y  N   4  
VFN  C26  C25  SING  Y  N   5  
VFN  C21  C22  SING  Y  N   6  
VFN  O18  C17  DOUB  N  N   7  
VFN  C19  C17  SING  N  N   8  
VFN  C25  C24  DOUB  Y  N   9  
VFN  C17  N7   SING  N  N  10  
VFN  C22  C23  DOUB  Y  N  11  
VFN  N7   C8   SING  N  N  12  
VFN  N7   C6   SING  N  N  13  
VFN  C24  C23  SING  Y  N  14  
VFN  C8   C9   SING  N  N  15  
VFN  C6   C5   SING  N  N  16  
VFN  C9   C14  DOUB  Y  N  17  
VFN  C9   C10  SING  Y  N  18  
VFN  C14  C13  SING  Y  N  19  
VFN  C5   O28  SING  Y  N  20  
VFN  C5   N4   DOUB  Y  N  21  
VFN  O28  C2   SING  Y  N  22  
VFN  C10  C11  DOUB  Y  N  23  
VFN  C13  C12  DOUB  Y  N  24  
VFN  N4   N3   SING  Y  N  25  
VFN  C2   N1   SING  N  N  26  
VFN  C2   N3   DOUB  Y  N  27  
VFN  C11  C12  SING  Y  N  28  
VFN  C12  C15  SING  N  N  29  
VFN  C15  N16  TRIP  N  N  30  
VFN  C23  H1   SING  N  N  31  
VFN  C24  H2   SING  N  N  32  
VFN  C11  H3   SING  N  N  33  
VFN  C13  H4   SING  N  N  34  
VFN  C10  H5   SING  N  N  35  
VFN  C14  H6   SING  N  N  36  
VFN  C22  H7   SING  N  N  37  
VFN  C25  H8   SING  N  N  38  
VFN  C8   H9   SING  N  N  39  
VFN  C8   H10  SING  N  N  40  
VFN  C6   H11  SING  N  N  41  
VFN  C6   H12  SING  N  N  42  
VFN  C19  H13  SING  N  N  43  
VFN  C19  H14  SING  N  N  44  
VFN  N1   H15  SING  N  N  45  
VFN  N1   H16  SING  N  N  46  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
VFN  InChI             InChI                 1.03   "InChI=1S/C19H16ClN5O2S/c20-15-3-1-2-4-16(15)28-12-18(26)25(11-17-23-24-19(22)27-17)10-14-7-5-13(9-21)6-8-14/h1-8H,10-12H2,(H2,22,24)"  
VFN  InChIKey          InChI                 1.03   DDHNQWBEECYOFY-UHFFFAOYSA-N  
VFN  SMILES_CANONICAL  CACTVS                3.385  "Nc1oc(CN(Cc2ccc(cc2)C#N)C(=O)CSc3ccccc3Cl)nn1"  
VFN  SMILES            CACTVS                3.385  "Nc1oc(CN(Cc2ccc(cc2)C#N)C(=O)CSc3ccccc3Cl)nn1"  
VFN  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1ccc(c(c1)SCC(=O)N(Cc2ccc(cc2)C#N)Cc3nnc(o3)N)Cl"  
VFN  SMILES            "OpenEye OEToolkits"  2.0.7  "c1ccc(c(c1)SCC(=O)N(Cc2ccc(cc2)C#N)Cc3nnc(o3)N)Cl"  
#
_pdbx_chem_comp_identifier.comp_id          VFN
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "~{N}-[(5-azanyl-1,3,4-oxadiazol-2-yl)methyl]-2-(2-chlorophenyl)sulfanyl-~{N}-[(4-cyanophenyl)methyl]ethanamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
VFN  "Create component"  2021-05-18  PDBE  
VFN  "Initial release"   2021-10-13  RCSB  
##
