data_YWN
# 
_chem_comp.id                                    YWN 
_chem_comp.name                                  "2-[(2R,3S,4R,5R)-5-(hydroxymethyl)-3,4-bis(oxidanyl)-1-pentyl-pyrrolidin-2-yl]-N-methyl-ethanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H26 N2 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-08-05 
_chem_comp.pdbx_modified_date                    2015-11-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        274.357 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YWN 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5ABH 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YWN C1   C1   C 0 1 N N N 27.212 0.638  288.949 0.726  -0.491 -0.338 C1   YWN 1  
YWN N2   N2   N 0 1 N N N 27.451 1.378  290.206 -0.553 -0.277 0.353  N2   YWN 2  
YWN C3   C3   C 0 1 N N R 28.920 1.561  290.441 -1.377 0.724  -0.356 C3   YWN 3  
YWN C4   C4   C 0 1 N N S 29.208 3.045  290.443 -2.839 0.258  -0.141 C4   YWN 4  
YWN C5   C5   C 0 1 N N R 28.077 3.571  289.593 -2.689 -1.285 -0.216 C5   YWN 5  
YWN C6   C6   C 0 1 N N R 26.901 2.748  290.090 -1.318 -1.534 0.447  C6   YWN 6  
YWN C7   C7   C 0 1 N N N 27.796 -0.761 288.872 1.764  -1.010 0.659  C7   YWN 7  
YWN C8   C8   C 0 1 N N N 27.508 -1.327 287.496 3.106  -1.197 -0.052 C8   YWN 8  
YWN C9   C9   C 0 1 N N N 27.787 -2.815 287.480 4.143  -1.717 0.945  C9   YWN 9  
YWN C10  C10  C 0 1 N N N 27.536 -3.409 286.108 5.485  -1.904 0.234  C10  YWN 10 
YWN C11  C11  C 0 1 N N N 29.444 0.832  291.672 -1.166 2.113  0.250  C11  YWN 11 
YWN C12  C12  C 0 1 N N N 28.524 0.866  292.886 0.129  2.691  -0.257 C12  YWN 12 
YWN O13  O13  O 0 1 N N N 27.301 0.757  292.775 0.689  2.184  -1.206 O13  YWN 13 
YWN N14  N14  N 0 1 N N N 29.149 0.939  294.064 0.666  3.772  0.343  N14  YWN 14 
YWN C15  C15  C 0 1 N N N 28.432 0.856  295.328 1.925  4.334  -0.150 C15  YWN 15 
YWN C18  C18  C 0 1 N N N 25.643 2.920  289.212 -0.578 -2.651 -0.292 C18  YWN 16 
YWN O19  O19  O 0 1 N N N 25.885 2.706  287.806 -0.628 -2.406 -1.699 O19  YWN 17 
YWN O20  O20  O 0 1 N N N 27.882 4.969  289.734 -3.731 -1.929 0.520  O20  YWN 18 
YWN O21  O21  O 0 1 N N N 29.200 3.662  291.740 -3.322 0.664  1.141  O21  YWN 19 
YWN H11C H11C H 0 0 N N N 26.124 0.555  288.810 0.591  -1.221 -1.135 H11C YWN 20 
YWN H12C H12C H 0 0 N N N 27.643 1.227  288.126 1.071  0.452  -0.763 H12C YWN 21 
YWN H71C H71C H 0 0 N N N 28.883 -0.719 289.036 1.880  -0.292 1.471  H71C YWN 22 
YWN H72C H72C H 0 0 N N N 27.334 -1.399 289.640 1.431  -1.966 1.065  H72C YWN 23 
YWN H3   H3   H 0 1 N N N 29.442 1.134  289.572 -1.134 0.732  -1.419 H3   YWN 24 
YWN H6   H6   H 0 1 N N N 26.648 3.103  291.100 -1.456 -1.807 1.493  H6   YWN 25 
YWN H4   H4   H 0 1 N N N 30.165 3.232  289.934 -3.487 0.626  -0.935 H4   YWN 26 
YWN H111 H111 H 0 0 N N N 29.609 -0.221 291.399 -1.992 2.764  -0.037 H111 YWN 27 
YWN H112 H112 H 0 0 N N N 30.402 1.291  291.958 -1.128 2.033  1.336  H112 YWN 28 
YWN H5   H5   H 0 1 N N N 28.271 3.317  288.540 -2.683 -1.621 -1.253 H5   YWN 29 
YWN H21  H21  H 0 1 N N N 29.389 4.589  291.651 -4.233 0.394  1.322  H21  YWN 30 
YWN H20  H20  H 0 1 N N N 27.162 5.246  289.180 -4.620 -1.742 0.190  H20  YWN 31 
YWN H181 H181 H 0 0 N N N 24.884 2.198  289.548 0.461  -2.677 0.035  H181 YWN 32 
YWN H182 H182 H 0 0 N N N 25.262 3.943  289.347 -1.052 -3.608 -0.073 H182 YWN 33 
YWN H81C H81C H 0 0 N N N 26.452 -1.152 287.244 2.990  -1.916 -0.863 H81C YWN 34 
YWN H82C H82C H 0 0 N N N 28.150 -0.828 286.755 3.438  -0.242 -0.457 H82C YWN 35 
YWN H91C H91C H 0 0 N N N 28.838 -2.985 287.757 4.259  -0.999 1.757  H91C YWN 36 
YWN H92C H92C H 0 0 N N N 27.130 -3.310 288.210 3.810  -2.673 1.351  H92C YWN 37 
YWN H101 H101 H 0 0 N N N 27.747 -4.488 286.131 5.369  -2.622 -0.577 H101 YWN 38 
YWN H102 H102 H 0 0 N N N 26.485 -3.247 285.825 5.818  -0.949 -0.171 H102 YWN 39 
YWN H103 H103 H 0 0 N N N 28.193 -2.922 285.372 6.224  -2.275 0.945  H103 YWN 40 
YWN H14  H14  H 0 1 N N N 30.142 1.054  294.078 0.218  4.178  1.102  H14  YWN 41 
YWN H151 H151 H 0 0 N N N 29.146 0.939  296.161 2.710  3.581  -0.085 H151 YWN 42 
YWN H152 H152 H 0 0 N N N 27.700 1.675  295.389 1.804  4.643  -1.189 H152 YWN 43 
YWN H153 H153 H 0 0 N N N 27.908 -0.109 295.389 2.200  5.198  0.456  H153 YWN 44 
YWN H19  H19  H 0 1 N N N 25.076 2.826  287.323 -0.178 -3.076 -2.231 H19  YWN 45 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YWN C1  N2   SING N N 1  
YWN C1  C7   SING N N 2  
YWN N2  C3   SING N N 3  
YWN N2  C6   SING N N 4  
YWN C3  C4   SING N N 5  
YWN C3  C11  SING N N 6  
YWN C4  C5   SING N N 7  
YWN C4  O21  SING N N 8  
YWN C5  C6   SING N N 9  
YWN C5  O20  SING N N 10 
YWN C6  C18  SING N N 11 
YWN C7  C8   SING N N 12 
YWN C8  C9   SING N N 13 
YWN C9  C10  SING N N 14 
YWN C11 C12  SING N N 15 
YWN C12 O13  DOUB N N 16 
YWN C12 N14  SING N N 17 
YWN N14 C15  SING N N 18 
YWN C18 O19  SING N N 19 
YWN C1  H11C SING N N 20 
YWN C1  H12C SING N N 21 
YWN C7  H71C SING N N 22 
YWN C7  H72C SING N N 23 
YWN C3  H3   SING N N 24 
YWN C6  H6   SING N N 25 
YWN C4  H4   SING N N 26 
YWN C11 H111 SING N N 27 
YWN C11 H112 SING N N 28 
YWN C5  H5   SING N N 29 
YWN O21 H21  SING N N 30 
YWN O20 H20  SING N N 31 
YWN C18 H181 SING N N 32 
YWN C18 H182 SING N N 33 
YWN C8  H81C SING N N 34 
YWN C8  H82C SING N N 35 
YWN C9  H91C SING N N 36 
YWN C9  H92C SING N N 37 
YWN C10 H101 SING N N 38 
YWN C10 H102 SING N N 39 
YWN C10 H103 SING N N 40 
YWN N14 H14  SING N N 41 
YWN C15 H151 SING N N 42 
YWN C15 H152 SING N N 43 
YWN C15 H153 SING N N 44 
YWN O19 H19  SING N N 45 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YWN InChI            InChI                1.03  "InChI=1S/C13H26N2O4/c1-3-4-5-6-15-9(7-11(17)14-2)12(18)13(19)10(15)8-16/h9-10,12-13,16,18-19H,3-8H2,1-2H3,(H,14,17)/t9-,10-,12+,13-/m1/s1" 
YWN InChIKey         InChI                1.03  NZYWNYJYZSBEBH-VCDKRKBESA-N                                                                                                                 
YWN SMILES_CANONICAL CACTVS               3.385 "CCCCCN1[C@H](CO)[C@@H](O)[C@@H](O)[C@H]1CC(=O)NC"                                                                                          
YWN SMILES           CACTVS               3.385 "CCCCCN1[CH](CO)[CH](O)[CH](O)[CH]1CC(=O)NC"                                                                                                
YWN SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CCCCCN1[C@@H]([C@@H]([C@@H]([C@H]1CO)O)O)CC(=O)NC"                                                                                         
YWN SMILES           "OpenEye OEToolkits" 1.7.6 "CCCCCN1C(C(C(C1CO)O)O)CC(=O)NC"                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YWN "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "2-[(2R,3S,4R,5R)-5-(hydroxymethyl)-3,4-bis(oxidanyl)-1-pentyl-pyrrolidin-2-yl]-N-methyl-ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YWN "Create component" 2015-08-05 EBI  
YWN "Initial release"  2015-11-18 RCSB 
# 
