data_6IO
#

_chem_comp.id                                   6IO
_chem_comp.name                                 "~{N}1,~{N}4-bis[2-(trifluoromethyl)pyrimidin-4-yl]cyclohexane-1,4-diamine"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C16 H16 F6 N6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-08-02
_chem_comp.pdbx_modified_date                   2021-11-12
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       406.329
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    6IO
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7PAV
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
6IO  C1   C1   C  0  1  Y  N  N  58.047   1.240   96.991  -3.606   1.507   0.762  C1   6IO   1  
6IO  C2   C2   C  0  1  Y  N  N  58.250   9.542   98.732   4.072   1.745   0.833  C2   6IO   2  
6IO  C3   C3   C  0  1  Y  N  N  57.635   0.100   96.344  -4.812   1.466   1.434  C3   6IO   3  
6IO  C7   C4   C  0  1  Y  N  N  56.053  -0.208   97.902  -5.391  -0.427   0.262  C7   6IO   4  
6IO  C8   C5   C  0  1  Y  N  N  57.798   9.831  101.329   5.273  -0.580   0.257  C8   6IO   5  
6IO  C9   C6   C  0  1  N  N  N  55.957   3.971   99.694  -0.273   1.733  -1.884  C9   6IO   6  
6IO  C10  C7   C  0  1  N  N  N  58.186   4.135  100.755  -0.278   1.167   0.550  C10  6IO   7  
6IO  C11  C8   C  0  1  N  N  N  56.234   5.247   98.917   0.766   2.826  -1.627  C11  6IO   8  
6IO  C12  C9   C  0  1  N  N  N  58.490   5.403   99.981   0.761   2.260   0.806  C12  6IO   9  
6IO  C13  C10  C  0  1  N  N  N  57.241   3.218   99.999  -1.152   1.563  -0.642  C13  6IO  10  
6IO  C14  C11  C  0  1  N  N  N  57.216   6.148   99.636   1.639   2.430  -0.435  C14  6IO  11  
6IO  C15  C12  C  0  1  N  N  N  54.925  -1.001   98.458  -6.397  -1.516  -0.010  C15  6IO  12  
6IO  C16  C13  C  0  1  N  N  N  57.528   9.923  102.789   5.954  -1.886  -0.061  C16  6IO  13  
6IO  N18  N1   N  0  1  Y  N  N  58.282  10.904  100.702   5.826   0.234   1.133  N18  6IO  14  
6IO  C4   C14  C  0  1  Y  N  N  58.491  10.719   99.398   5.260   1.393   1.442  C4   6IO  15  
6IO  C5   C15  C  0  1  Y  N  N  57.389   1.626   98.136  -3.340   0.515  -0.184  C5   6IO  16  
6IO  C6   C16  C  0  1  Y  N  N  57.761   8.487   99.468   3.512   0.860  -0.090  C6   6IO  17  
6IO  N17  N2   N  0  1  Y  N  N  56.629  -0.655   96.780  -5.671   0.495   1.161  N17  6IO  18  
6IO  N19  N3   N  0  1  Y  N  N  56.374   0.885   98.596  -4.250  -0.430  -0.399  N19  6IO  19  
6IO  N20  N4   N  0  1  Y  N  N  57.535   8.644  100.781   4.140  -0.284  -0.347  N20  6IO  20  
6IO  N21  N5   N  0  1  N  N  N  57.875   2.810   98.750  -2.147   0.516  -0.888  N21  6IO  21  
6IO  N22  N6   N  0  1  N  N  N  57.528   7.275   98.771   2.321   1.167  -0.728  N22  6IO  22  
6IO  F23  F1   F  0  1  N  N  N  53.720  -0.434   98.208  -6.061  -2.176  -1.197  F23  6IO  23  
6IO  F24  F2   F  0  1  N  N  N  55.000  -1.153   99.800  -6.392  -2.430   1.049  F24  6IO  24  
6IO  F25  F3   F  0  1  N  N  N  54.850  -2.268   97.991  -7.671  -0.952  -0.134  F25  6IO  25  
6IO  F26  F4   F  0  1  N  N  N  56.208  10.126  103.032   6.924  -2.155   0.910  F26  6IO  26  
6IO  F27  F5   F  0  1  N  N  N  57.847   8.783  103.456   5.006  -2.915  -0.072  F27  6IO  27  
6IO  F28  F6   F  0  1  N  N  N  58.204  10.918  103.425   6.563  -1.800  -1.317  F28  6IO  28  
6IO  H1   H1   H  0  1  N  N  N  58.872   1.822   96.608  -2.888   2.289   0.961  H1   6IO  29  
6IO  H2   H2   H  0  1  N  N  N  58.437   9.448   97.672   3.586   2.680   1.068  H2   6IO  30  
6IO  H3   H3   H  0  1  N  N  N  58.150  -0.197   95.442  -5.052   2.217   2.172  H3   6IO  31  
6IO  H4   H4   H  0  1  N  N  N  55.460   4.229  100.641  -0.896   2.015  -2.733  H4   6IO  32  
6IO  H5   H5   H  0  1  N  N  N  55.296   3.325   99.097   0.234   0.793  -2.101  H5   6IO  33  
6IO  H6   H6   H  0  1  N  N  N  59.128   3.598  100.941   0.229   0.227   0.332  H6   6IO  34  
6IO  H7   H7   H  0  1  N  N  N  57.724   4.408  101.715  -0.904   1.046   1.434  H7   6IO  35  
6IO  H8   H8   H  0  1  N  N  N  55.288   5.791   98.779   1.391   2.947  -2.512  H8   6IO  36  
6IO  H9   H9   H  0  1  N  N  N  56.650   4.981   97.934   0.258   3.766  -1.410  H9   6IO  37  
6IO  H10  H10  H  0  1  N  N  N  59.016   5.140   99.051   0.253   3.200   1.024  H10  6IO  38  
6IO  H11  H11  H  0  1  N  N  N  59.132   6.053  100.594   1.383   1.978   1.656  H11  6IO  39  
6IO  H12  H12  H  0  1  N  N  N  57.012   2.337  100.617  -1.659   2.502  -0.425  H12  6IO  40  
6IO  H13  H13  H  0  1  N  N  N  56.753   6.511  100.565   2.379   3.209  -0.252  H13  6IO  41  
6IO  H14  H14  H  0  1  N  N  N  58.876  11.551   98.827   5.723   2.053   2.161  H14  6IO  42  
6IO  H15  H15  H  0  1  N  N  N  58.848   2.675   98.936  -1.970  -0.177  -1.543  H15  6IO  43  
6IO  H16  H16  H  0  1  N  N  N  56.760   7.414   98.146   1.939   0.547  -1.367  H16  6IO  44  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
6IO  C3   N17  DOUB  Y  N   1  
6IO  C3   C1   SING  Y  N   2  
6IO  N17  C7   SING  Y  N   3  
6IO  C1   C5   DOUB  Y  N   4  
6IO  C7   C15  SING  N  N   5  
6IO  C7   N19  DOUB  Y  N   6  
6IO  F25  C15  SING  N  N   7  
6IO  C5   N19  SING  Y  N   8  
6IO  C5   N21  SING  N  N   9  
6IO  F23  C15  SING  N  N  10  
6IO  C15  F24  SING  N  N  11  
6IO  C2   C4   DOUB  Y  N  12  
6IO  C2   C6   SING  Y  N  13  
6IO  N21  C13  SING  N  N  14  
6IO  N22  C6   SING  N  N  15  
6IO  N22  C14  SING  N  N  16  
6IO  C11  C14  SING  N  N  17  
6IO  C11  C9   SING  N  N  18  
6IO  C4   N18  SING  Y  N  19  
6IO  C6   N20  DOUB  Y  N  20  
6IO  C14  C12  SING  N  N  21  
6IO  C9   C13  SING  N  N  22  
6IO  C12  C10  SING  N  N  23  
6IO  C13  C10  SING  N  N  24  
6IO  N18  C8   DOUB  Y  N  25  
6IO  N20  C8   SING  Y  N  26  
6IO  C8   C16  SING  N  N  27  
6IO  C16  F26  SING  N  N  28  
6IO  C16  F28  SING  N  N  29  
6IO  C16  F27  SING  N  N  30  
6IO  C1   H1   SING  N  N  31  
6IO  C2   H2   SING  N  N  32  
6IO  C3   H3   SING  N  N  33  
6IO  C9   H4   SING  N  N  34  
6IO  C9   H5   SING  N  N  35  
6IO  C10  H6   SING  N  N  36  
6IO  C10  H7   SING  N  N  37  
6IO  C11  H8   SING  N  N  38  
6IO  C11  H9   SING  N  N  39  
6IO  C12  H10  SING  N  N  40  
6IO  C12  H11  SING  N  N  41  
6IO  C13  H12  SING  N  N  42  
6IO  C14  H13  SING  N  N  43  
6IO  C4   H14  SING  N  N  44  
6IO  N21  H15  SING  N  N  45  
6IO  N22  H16  SING  N  N  46  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
6IO  InChI             InChI                 1.03   "InChI=1S/C16H16F6N6/c17-15(18,19)13-23-7-5-11(27-13)25-9-1-2-10(4-3-9)26-12-6-8-24-14(28-12)16(20,21)22/h5-10H,1-4H2,(H,23,25,27)(H,24,26,28)/t9-,10+"  
6IO  InChIKey          InChI                 1.03   AWHJAHLJFNFTGF-AOOOYVTPSA-N  
6IO  SMILES_CANONICAL  CACTVS                3.385  "FC(F)(F)c1nccc(N[C@@H]2CC[C@@H](CC2)Nc3ccnc(n3)C(F)(F)F)n1"  
6IO  SMILES            CACTVS                3.385  "FC(F)(F)c1nccc(N[CH]2CC[CH](CC2)Nc3ccnc(n3)C(F)(F)F)n1"  
6IO  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cnc(nc1NC2CCC(CC2)Nc3ccnc(n3)C(F)(F)F)C(F)(F)F"  
6IO  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cnc(nc1NC2CCC(CC2)Nc3ccnc(n3)C(F)(F)F)C(F)(F)F"  
#
_pdbx_chem_comp_identifier.comp_id          6IO
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "~{N}1,~{N}4-bis[2-(trifluoromethyl)pyrimidin-4-yl]cyclohexane-1,4-diamine"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
6IO  "Create component"  2021-08-02  PDBE  
6IO  "Initial release"   2021-11-17  RCSB  
##
