data_KTO
# 
_chem_comp.id                                    KTO 
_chem_comp.name                                  "(1~{S},5~{R})-9-oxidanyl-9-azabicyclo[3.3.1]nonan-3-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C8 H13 N O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-05-12 
_chem_comp.pdbx_modified_date                    2024-10-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        155.194 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     KTO 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5B59 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
KTO O20 O1  O 0 1 N N N N N N -5.816 -20.757 19.152 -2.242 1.218  0.020  O20 KTO 1  
KTO C17 C1  C 0 1 N N N N N N -5.844 -21.085 17.969 -1.044 1.066  0.002  C17 KTO 2  
KTO C15 C2  C 0 1 N N N N N N -4.738 -21.985 17.456 -0.245 0.977  1.285  C15 KTO 3  
KTO C14 C3  C 0 1 N N R N N N -5.267 -22.979 16.426 0.661  -0.255 1.204  C14 KTO 4  
KTO C11 C4  C 0 1 N N N N N N -6.990 -20.615 17.074 -0.288 0.950  -1.306 C11 KTO 5  
KTO C13 C5  C 0 1 N N S N N N -7.310 -21.649 15.990 0.619  -0.281 -1.230 C13 KTO 6  
KTO C12 C6  C 0 1 N N N N N N -8.227 -22.764 16.492 -0.230 -1.551 -1.224 C12 KTO 7  
KTO C16 C7  C 0 1 N N N N N N -7.505 -23.684 17.478 -1.098 -1.577 0.037  C16 KTO 8  
KTO C10 C8  C 0 1 N N N N N N -6.101 -24.126 17.015 -0.188 -1.525 1.255  C10 KTO 9  
KTO N18 N1  N 0 1 N N N N N N -6.070 -22.238 15.426 1.450  -0.219 -0.029 N18 KTO 10 
KTO O19 O2  O 0 1 N N N N N N -5.347 -21.272 14.831 2.331  0.949  -0.061 O19 KTO 11 
KTO H1  H1  H 0 1 N N N N N N -4.306 -22.540 18.302 0.364  1.873  1.401  H1  KTO 12 
KTO H2  H2  H 0 1 N N N N N N -3.959 -21.365 16.989 -0.923 0.880  2.133  H2  KTO 13 
KTO H3  H3  H 0 1 N N N N N N -4.402 -23.424 15.914 1.344  -0.250 2.054  H3  KTO 14 
KTO H4  H4  H 0 1 N N N N N N -6.704 -19.668 16.593 -0.993 0.836  -2.129 H4  KTO 15 
KTO H5  H5  H 0 1 N N N N N N -7.885 -20.456 17.693 0.316  1.844  -1.461 H5  KTO 16 
KTO H6  H6  H 0 1 N N N N N N -7.838 -21.125 15.180 1.273  -0.294 -2.102 H6  KTO 17 
KTO H7  H7  H 0 1 N N N N N N -9.096 -22.313 16.994 -0.871 -1.563 -2.106 H7  KTO 18 
KTO H8  H8  H 0 1 N N N N N N -8.569 -23.359 15.633 0.421  -2.424 -1.236 H8  KTO 19 
KTO H9  H9  H 0 1 N N N N N N -7.401 -23.151 18.435 -1.767 -0.717 0.038  H9  KTO 20 
KTO H10 H10 H 0 1 N N N N N N -8.120 -24.584 17.624 -1.684 -2.496 0.058  H10 KTO 21 
KTO H11 H11 H 0 1 N N N N N N -6.216 -24.905 16.247 0.465  -2.398 1.262  H11 KTO 22 
KTO H12 H12 H 0 1 N N N N N N -5.563 -24.541 17.880 -0.798 -1.519 2.158  H12 KTO 23 
KTO H13 H13 H 0 1 N N N N N N -4.553 -21.647 14.469 2.901  1.033  0.715  H13 KTO 24 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
KTO O19 N18 SING N N 1  
KTO N18 C13 SING N N 2  
KTO N18 C14 SING N N 3  
KTO C13 C12 SING N N 4  
KTO C13 C11 SING N N 5  
KTO C14 C10 SING N N 6  
KTO C14 C15 SING N N 7  
KTO C12 C16 SING N N 8  
KTO C10 C16 SING N N 9  
KTO C11 C17 SING N N 10 
KTO C15 C17 SING N N 11 
KTO C17 O20 DOUB N N 12 
KTO C15 H1  SING N N 13 
KTO C15 H2  SING N N 14 
KTO C14 H3  SING N N 15 
KTO C11 H4  SING N N 16 
KTO C11 H5  SING N N 17 
KTO C13 H6  SING N N 18 
KTO C12 H7  SING N N 19 
KTO C12 H8  SING N N 20 
KTO C16 H9  SING N N 21 
KTO C16 H10 SING N N 22 
KTO C10 H11 SING N N 23 
KTO C10 H12 SING N N 24 
KTO O19 H13 SING N N 25 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
KTO InChI            InChI                1.06  "InChI=1S/C8H13NO2/c10-8-4-6-2-1-3-7(5-8)9(6)11/h6-7,11H,1-5H2/t6-,7+" 
KTO InChIKey         InChI                1.06  KCMINNPTGLFCCL-KNVOCYPGSA-N                                            
KTO SMILES_CANONICAL CACTVS               3.385 "ON1[C@H]2CCC[C@@H]1CC(=O)C2"                                          
KTO SMILES           CACTVS               3.385 "ON1[CH]2CCC[CH]1CC(=O)C2"                                             
KTO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1C[C@@H]2CC(=O)C[C@H](C1)N2O"                                        
KTO SMILES           "OpenEye OEToolkits" 2.0.7 "C1CC2CC(=O)CC(C1)N2O"                                                 
# 
_pdbx_chem_comp_identifier.comp_id           KTO 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(1~{S},5~{R})-9-oxidanyl-9-azabicyclo[3.3.1]nonan-3-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
KTO "Create component"   2016-05-12 RCSB 
KTO "Initial release"    2016-09-14 RCSB 
KTO "Other modification" 2024-07-03 PDBE 
KTO "Modify coordinates" 2024-09-24 PDBJ 
KTO "Modify PCM"         2024-09-27 PDBE 
KTO "Modify PCM"         2024-10-03 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            KTO 
_pdbx_chem_comp_pcm.modified_residue_id                TRO 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               O19 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   CG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
