data_XRO
# 
_chem_comp.id                                    XRO 
_chem_comp.name                                  "5-{2-[4-(cyanomethyl)phenyl]ethyl}-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H13 N3 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-11-27 
_chem_comp.pdbx_modified_date                    2013-11-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        299.281 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     XRO 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3W1X 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
XRO OAB OAB O 0 1 N N N 4.874 17.202 14.431 -2.813 -3.207 0.128  OAB XRO 1  
XRO CAP CAP C 0 1 N N N 6.102 17.194 14.366 -2.061 -2.090 0.142  CAP XRO 2  
XRO OAE OAE O 0 1 N N N 6.886 18.175 14.289 -0.850 -2.174 0.136  OAE XRO 3  
XRO CAS CAS C 0 1 N N N 6.767 15.793 14.362 -2.712 -0.759 0.164  CAS XRO 4  
XRO NAN NAN N 0 1 N N N 6.305 14.996 15.418 -4.081 -0.652 0.047  NAN XRO 5  
XRO CAU CAU C 0 1 N N N 6.629 13.702 15.531 -4.690 0.545  0.065  CAU XRO 6  
XRO OAC OAC O 0 1 N N N 6.222 12.986 16.437 -5.900 0.596  -0.042 OAC XRO 7  
XRO NAO NAO N 0 1 N N N 7.584 13.251 14.625 -3.996 1.690  0.199  NAO XRO 8  
XRO CAV CAV C 0 1 N N N 8.152 14.007 13.558 -2.653 1.664  0.319  CAV XRO 9  
XRO OAD OAD O 0 1 N N N 8.998 13.472 12.806 -2.023 2.698  0.441  OAD XRO 10 
XRO CAT CAT C 0 1 N N N 7.754 15.370 13.493 -1.965 0.367  0.307  CAT XRO 11 
XRO CAM CAM C 0 1 N N N 8.237 16.149 12.376 -0.466 0.288  0.439  CAM XRO 12 
XRO CAL CAL C 0 1 N N N 7.662 15.714 10.987 0.174  0.389  -0.947 CAL XRO 13 
XRO CAR CAR C 0 1 Y N N 6.255 15.930 10.926 1.673  0.309  -0.816 CAR XRO 14 
XRO CAI CAI C 0 1 Y N N 5.701 17.132 10.502 2.414  1.463  -0.637 CAI XRO 15 
XRO CAG CAG C 0 1 Y N N 4.254 17.323 10.575 3.789  1.390  -0.516 CAG XRO 16 
XRO CAQ CAQ C 0 1 Y N N 3.413 16.347 11.009 4.423  0.163  -0.573 CAQ XRO 17 
XRO CAK CAK C 0 1 N N N 1.911 16.489 11.092 5.923  0.083  -0.442 CAK XRO 18 
XRO CAF CAF C 0 1 N N N 1.651 17.398 12.313 6.283  -0.072 0.977  CAF XRO 19 
XRO NAA NAA N 0 1 N N N 1.498 18.028 13.228 6.562  -0.192 2.072  NAA XRO 20 
XRO CAH CAH C 0 1 Y N N 3.955 15.098 11.345 3.683  -0.991 -0.750 CAH XRO 21 
XRO CAJ CAJ C 0 1 Y N N 5.357 14.920 11.291 2.307  -0.918 -0.867 CAJ XRO 22 
XRO H1  H1  H 0 1 N N N 4.561 18.099 14.415 -2.343 -4.053 0.113  H1  XRO 23 
XRO H2  H2  H 0 1 N N N 7.901 12.309 14.732 -4.465 2.539  0.208  H2  XRO 24 
XRO H4  H4  H 0 1 N N N 9.332 16.055 12.339 -0.112 1.108  1.063  H4  XRO 25 
XRO H5  H5  H 0 1 N N N 7.964 17.201 12.547 -0.191 -0.663 0.897  H5  XRO 26 
XRO H6  H6  H 0 1 N N N 7.869 14.645 10.831 -0.180 -0.431 -1.572 H6  XRO 27 
XRO H7  H7  H 0 1 N N N 8.151 16.301 10.196 -0.100 1.339  -1.405 H7  XRO 28 
XRO H8  H8  H 0 1 N N N 6.335 17.919 10.121 1.918  2.421  -0.593 H8  XRO 29 
XRO H9  H9  H 0 1 N N N 3.838 18.273 10.274 4.367  2.291  -0.378 H9  XRO 30 
XRO H10 H10 H 0 1 N N N 1.517 16.953 10.176 6.292  -0.773 -1.007 H10 XRO 31 
XRO H11 H11 H 0 1 N N N 1.439 15.506 11.237 6.371  0.997  -0.833 H11 XRO 32 
XRO H12 H12 H 0 1 N N N 3.311 14.283 11.641 4.178  -1.949 -0.794 H12 XRO 33 
XRO H13 H13 H 0 1 N N N 5.758 13.950 11.546 1.728  -1.820 -1.002 H13 XRO 34 
XRO H14 H14 H 0 1 N N N 5.713 15.408 16.111 -4.615 -1.456 -0.052 H14 XRO 35 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
XRO CAI CAG DOUB Y N 1  
XRO CAI CAR SING Y N 2  
XRO CAG CAQ SING Y N 3  
XRO CAR CAL SING N N 4  
XRO CAR CAJ DOUB Y N 5  
XRO CAL CAM SING N N 6  
XRO CAQ CAK SING N N 7  
XRO CAQ CAH DOUB Y N 8  
XRO CAK CAF SING N N 9  
XRO CAJ CAH SING Y N 10 
XRO CAF NAA TRIP N N 11 
XRO CAM CAT SING N N 12 
XRO OAD CAV DOUB N N 13 
XRO CAT CAV SING N N 14 
XRO CAT CAS DOUB N N 15 
XRO CAV NAO SING N N 16 
XRO OAE CAP DOUB N N 17 
XRO CAS CAP SING N N 18 
XRO CAS NAN SING N N 19 
XRO CAP OAB SING N N 20 
XRO NAO CAU SING N N 21 
XRO NAN CAU SING N N 22 
XRO CAU OAC DOUB N N 23 
XRO OAB H1  SING N N 24 
XRO NAO H2  SING N N 25 
XRO CAM H4  SING N N 26 
XRO CAM H5  SING N N 27 
XRO CAL H6  SING N N 28 
XRO CAL H7  SING N N 29 
XRO CAI H8  SING N N 30 
XRO CAG H9  SING N N 31 
XRO CAK H10 SING N N 32 
XRO CAK H11 SING N N 33 
XRO CAH H12 SING N N 34 
XRO CAJ H13 SING N N 35 
XRO NAN H14 SING N N 36 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
XRO SMILES           ACDLabs              12.01 "O=C1NC(C(=O)O)=C(C(=O)N1)CCc2ccc(cc2)CC#N"                                                                                 
XRO InChI            InChI                1.03  "InChI=1S/C15H13N3O4/c16-8-7-10-3-1-9(2-4-10)5-6-11-12(14(20)21)17-15(22)18-13(11)19/h1-4H,5-7H2,(H,20,21)(H2,17,18,19,22)" 
XRO InChIKey         InChI                1.03  HLSGPFKGIFERQZ-UHFFFAOYSA-N                                                                                                 
XRO SMILES_CANONICAL CACTVS               3.370 "OC(=O)C1=C(CCc2ccc(CC#N)cc2)C(=O)NC(=O)N1"                                                                                 
XRO SMILES           CACTVS               3.370 "OC(=O)C1=C(CCc2ccc(CC#N)cc2)C(=O)NC(=O)N1"                                                                                 
XRO SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1cc(ccc1CCC2=C(NC(=O)NC2=O)C(=O)O)CC#N"                                                                                   
XRO SMILES           "OpenEye OEToolkits" 1.7.6 "c1cc(ccc1CCC2=C(NC(=O)NC2=O)C(=O)O)CC#N"                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
XRO "SYSTEMATIC NAME" ACDLabs              12.01 "5-{2-[4-(cyanomethyl)phenyl]ethyl}-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid" 
XRO "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "5-[2-[4-(cyanomethyl)phenyl]ethyl]-2,4-bis(oxidanylidene)-1H-pyrimidine-6-carboxylic acid"   
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
XRO "Create component" 2012-11-27 PDBJ 
XRO "Initial release"  2013-11-27 RCSB 
# 
