data_YTO
# 
_chem_comp.id                                    YTO 
_chem_comp.name                                  "3-[3-fluoranyl-4-(methylsulfonylmethyl)phenyl]-7-[(1~{R})-1-(1~{H}-1,2,3-triazol-5-ylmethoxy)ethyl]-1~{H}-indole-2-carboxylic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H21 F N4 O5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-21 
_chem_comp.pdbx_modified_date                    2024-07-05 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        472.489 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YTO 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8PG4 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YTO N12  N1  N 0 1 Y N N N N N -22.734 -10.967 11.879 1.301  1.568  0.327  N12  YTO 1  
YTO C13  C1  C 0 1 Y N N N N N -22.326 -10.714 10.625 -0.067 1.548  0.149  C13  YTO 2  
YTO C24  C2  C 0 1 N N N N N N -20.376 -10.038 3.876  -8.691 -1.075 -0.127 C24  YTO 3  
YTO C31  C3  C 0 1 Y N N N N N -21.502 -14.184 11.132 0.880  -1.968 0.570  C31  YTO 4  
YTO C30  C4  C 0 1 Y N N N N N -21.891 -12.841 11.098 0.679  -0.593 0.427  C30  YTO 5  
YTO C29  C5  C 0 1 Y N N N N N -20.317 -11.078 8.174  -2.580 -0.064 -1.150 C29  YTO 6  
YTO C32  C6  C 0 1 Y N N N N N -21.742 -14.945 12.271 2.140  -2.453 0.778  C32  YTO 7  
YTO C33  C7  C 0 1 Y N N N N N -22.365 -14.357 13.365 3.225  -1.589 0.841  C33  YTO 8  
YTO C27  C8  C 0 1 Y N N N N N -19.699 -11.230 6.939  -3.882 -0.511 -1.278 C27  YTO 9  
YTO O25  O1  O 0 1 N N N N N N -21.575 -12.394 3.500  -6.912 -0.018 1.507  O25  YTO 10 
YTO C14  C9  C 0 1 N N N N N N -22.554 -9.347  9.979  -0.915 2.725  -0.060 C14  YTO 11 
YTO C20  C10 C 0 1 Y N N N N N -20.629 -13.402 6.727  -3.848 -1.293 0.992  C20  YTO 12 
YTO C19  C11 C 0 1 Y N N N N N -21.267 -13.272 7.951  -2.551 -0.845 1.134  C19  YTO 13 
YTO C21  C12 C 0 1 Y N N N N N -19.847 -12.393 6.191  -4.514 -1.124 -0.208 C21  YTO 14 
YTO C18  C13 C 0 1 Y N N N N N -21.117 -12.091 8.674  -1.905 -0.232 0.059  C18  YTO 15 
YTO C17  C14 C 0 1 Y N N N N N -21.775 -11.880 10.075 -0.509 0.238  0.202  C17  YTO 16 
YTO C11  C15 C 0 1 Y N N N N N -22.505 -12.254 12.207 1.774  0.288  0.496  C11  YTO 17 
YTO C10  C16 C 0 1 Y N N N N N -22.745 -13.034 13.385 3.051  -0.230 0.703  C10  YTO 18 
YTO C01  C17 C 0 1 N N N N N N -22.372 -12.194 15.761 4.384  1.228  2.201  C01  YTO 19 
YTO C02  C18 C 0 1 N N R N N N -23.427 -12.763 14.801 4.239  0.695  0.774  C02  YTO 20 
YTO C04  C19 C 0 1 N N N N N N -25.570 -12.478 14.000 6.425  0.792  -0.204 C04  YTO 21 
YTO C05  C20 C 0 1 Y N N N N N -26.702 -13.062 14.859 7.621  -0.059 -0.544 C05  YTO 22 
YTO C06  C21 C 0 1 Y N N N N N -27.976 -13.445 14.355 7.761  -1.388 -0.327 C06  YTO 23 
YTO C22  C22 C 0 1 N N N N N N -19.168 -12.559 4.827  -5.934 -1.610 -0.354 C22  YTO 24 
YTO F28  F1  F 0 1 N N N N N N -18.969 -10.174 6.473  -4.538 -0.350 -2.448 F28  YTO 25 
YTO N07  N2  N 0 1 Y N N N N N -28.627 -13.940 15.417 8.973  -1.722 -0.784 N07  YTO 26 
YTO N08  N3  N 0 1 Y N N N N N -27.862 -13.856 16.468 9.545  -0.669 -1.253 N08  YTO 27 
YTO N09  N4  N 0 1 Y N N N N N -26.676 -13.317 16.163 8.768  0.349  -1.134 N09  YTO 28 
YTO O03  O2  O 0 1 N N N N N N -24.602 -12.051 14.890 5.422  -0.020 0.410  O03  YTO 29 
YTO O15  O3  O 0 1 N N N N N N -22.398 -8.286  10.635 -0.364 3.956  -0.092 O15  YTO 30 
YTO O16  O4  O 0 1 N N N N N N -23.132 -9.313  8.832  -2.115 2.591  -0.207 O16  YTO 31 
YTO O26  O5  O 0 1 N N N N N N -19.670 -11.911 2.142  -6.948 0.781  -0.811 O26  YTO 32 
YTO S23  S1  S 0 1 N N N N N N -20.226 -11.816 3.519  -7.078 -0.284 0.121  S23  YTO 33 
YTO H121 H1  H 0 0 N N N N N N -23.151 -10.292 12.487 1.850  2.368  0.327  H121 YTO 34 
YTO H243 H2  H 0 0 N N N N N N -20.785 -9.900  4.888  -9.484 -0.372 0.128  H243 YTO 35 
YTO H242 H3  H 0 0 N N N N N N -19.384 -9.567  3.814  -8.793 -1.375 -1.170 H242 YTO 36 
YTO H241 H4  H 0 0 N N N N N N -21.050 -9.572  3.142  -8.767 -1.955 0.513  H241 YTO 37 
YTO H311 H5  H 0 0 N N N N N N -21.017 -14.629 10.276 0.040  -2.646 0.522  H311 YTO 38 
YTO H291 H6  H 0 0 N N N N N N -20.174 -10.171 8.743  -2.086 0.410  -1.985 H291 YTO 39 
YTO H321 H7  H 0 0 N N N N N N -21.447 -15.983 12.305 2.293  -3.515 0.894  H321 YTO 40 
YTO H331 H8  H 0 0 N N N N N N -22.559 -14.964 14.237 4.216  -1.987 1.006  H331 YTO 41 
YTO H201 H9  H 0 0 N N N N N N -20.746 -14.322 6.173  -4.348 -1.768 1.823  H201 YTO 42 
YTO H191 H10 H 0 0 N N N N N N -21.873 -14.077 8.339  -2.035 -0.970 2.075  H191 YTO 43 
YTO H013 H11 H 0 0 N N N N N N -22.833 -12.003 16.742 5.244  1.897  2.253  H013 YTO 44 
YTO H012 H12 H 0 0 N N N N N N -21.552 -12.918 15.876 3.482  1.773  2.479  H012 YTO 45 
YTO H011 H13 H 0 0 N N N N N N -21.975 -11.253 15.353 4.531  0.394  2.888  H011 YTO 46 
YTO H021 H14 H 0 0 N N N N N N -23.644 -13.769 15.191 4.092  1.529  0.088  H021 YTO 47 
YTO H041 H15 H 0 0 N N N N N N -25.161 -13.249 13.330 6.726  1.581  0.486  H041 YTO 48 
YTO H042 H16 H 0 0 N N N N N N -25.940 -11.632 13.402 6.025  1.238  -1.114 H042 YTO 49 
YTO H061 H17 H 0 0 N N N N N N -28.338 -13.357 13.341 7.037  -2.049 0.126  H061 YTO 50 
YTO H222 H18 H 0 0 N N N N N N -19.024 -13.629 4.617  -6.116 -1.893 -1.390 H222 YTO 51 
YTO H221 H19 H 0 0 N N N N N N -18.191 -12.053 4.840  -6.090 -2.473 0.293  H221 YTO 52 
YTO H091 H20 H 0 0 N N N N N N -25.919 -13.141 16.792 8.970  1.255  -1.417 H091 YTO 53 
YTO H1   H21 H 0 1 N N N N N N -22.760 -7.555  10.147 -1.002 4.668  -0.235 H1   YTO 54 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YTO O26 S23  DOUB N N 1  
YTO O25 S23  DOUB N N 2  
YTO S23 C24  SING N N 3  
YTO S23 C22  SING N N 4  
YTO C22 C21  SING N N 5  
YTO C21 C20  DOUB Y N 6  
YTO C21 C27  SING Y N 7  
YTO F28 C27  SING N N 8  
YTO C20 C19  SING Y N 9  
YTO C27 C29  DOUB Y N 10 
YTO C19 C18  DOUB Y N 11 
YTO C29 C18  SING Y N 12 
YTO C18 C17  SING N N 13 
YTO O16 C14  DOUB N N 14 
YTO C14 C13  SING N N 15 
YTO C14 O15  SING N N 16 
YTO C17 C13  DOUB Y N 17 
YTO C17 C30  SING Y N 18 
YTO C13 N12  SING Y N 19 
YTO C30 C31  DOUB Y N 20 
YTO C30 C11  SING Y N 21 
YTO C31 C32  SING Y N 22 
YTO N12 C11  SING Y N 23 
YTO C11 C10  DOUB Y N 24 
YTO C32 C33  DOUB Y N 25 
YTO C33 C10  SING Y N 26 
YTO C10 C02  SING N N 27 
YTO C04 C05  SING N N 28 
YTO C04 O03  SING N N 29 
YTO C06 C05  DOUB Y N 30 
YTO C06 N07  SING Y N 31 
YTO C02 O03  SING N N 32 
YTO C02 C01  SING N N 33 
YTO C05 N09  SING Y N 34 
YTO N07 N08  DOUB Y N 35 
YTO N09 N08  SING Y N 36 
YTO N12 H121 SING N N 37 
YTO C24 H243 SING N N 38 
YTO C24 H242 SING N N 39 
YTO C24 H241 SING N N 40 
YTO C31 H311 SING N N 41 
YTO C29 H291 SING N N 42 
YTO C32 H321 SING N N 43 
YTO C33 H331 SING N N 44 
YTO C20 H201 SING N N 45 
YTO C19 H191 SING N N 46 
YTO C01 H013 SING N N 47 
YTO C01 H012 SING N N 48 
YTO C01 H011 SING N N 49 
YTO C02 H021 SING N N 50 
YTO C04 H041 SING N N 51 
YTO C04 H042 SING N N 52 
YTO C06 H061 SING N N 53 
YTO C22 H222 SING N N 54 
YTO C22 H221 SING N N 55 
YTO N09 H091 SING N N 56 
YTO O15 H1   SING N N 57 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YTO InChI            InChI                1.06  "InChI=1S/C22H21FN4O5S/c1-12(32-10-15-9-24-27-26-15)16-4-3-5-17-19(21(22(28)29)25-20(16)17)13-6-7-14(18(23)8-13)11-33(2,30)31/h3-9,12,25H,10-11H2,1-2H3,(H,28,29)(H,24,26,27)/t12-/m1/s1" 
YTO InChIKey         InChI                1.06  GMSPDCZAPVZKON-GFCCVEGCSA-N                                                                                                                                                               
YTO SMILES_CANONICAL CACTVS               3.385 "C[C@@H](OCc1[nH]nnc1)c2cccc3c2[nH]c(C(O)=O)c3c4ccc(C[S](C)(=O)=O)c(F)c4"                                                                                                                 
YTO SMILES           CACTVS               3.385 "C[CH](OCc1[nH]nnc1)c2cccc3c2[nH]c(C(O)=O)c3c4ccc(C[S](C)(=O)=O)c(F)c4"                                                                                                                   
YTO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](c1cccc2c1[nH]c(c2c3ccc(c(c3)F)CS(=O)(=O)C)C(=O)O)OCc4cnn[nH]4"                                                                                                                    
YTO SMILES           "OpenEye OEToolkits" 2.0.7 "CC(c1cccc2c1[nH]c(c2c3ccc(c(c3)F)CS(=O)(=O)C)C(=O)O)OCc4cnn[nH]4"                                                                                                                        
# 
_pdbx_chem_comp_identifier.comp_id           YTO 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "3-[3-fluoranyl-4-(methylsulfonylmethyl)phenyl]-7-[(1~{R})-1-(1~{H}-1,2,3-triazol-5-ylmethoxy)ethyl]-1~{H}-indole-2-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YTO "Create component" 2023-06-21 PDBE 
YTO "Initial release"  2024-07-10 RCSB 
# 
