data_8DP
# 
_chem_comp.id                                    8DP 
_chem_comp.name                                  "8-demethyl-8-aminoriboflavin-5'-phosphate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C16 H19 N5 O9 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2016-12-06 
_chem_comp.pdbx_modified_date                    2017-12-15 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        456.324 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     8DP 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5MLD 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
8DP C4  C1  C 0 1 N N N 173.938 2.122  241.735 -0.125 0.888  -0.564 C4  8DP 1  
8DP C5  C2  C 0 1 N N N 175.221 2.048  242.539 0.574  0.535  0.724  C5  8DP 2  
8DP C8  C3  C 0 1 Y N N 173.487 2.234  246.381 3.974  2.963  0.408  C8  8DP 3  
8DP N3  N1  N 0 1 Y N N 174.854 -1.442 245.032 4.393  -1.100 -0.140 N3  8DP 4  
8DP C2  C4  C 0 1 N N S 172.966 3.986  240.337 -2.526 0.383  -0.202 C2  8DP 5  
8DP N2  N2  N 0 1 N N N 173.003 3.512  246.864 3.861  4.338  0.588  N2  8DP 6  
8DP N1  N3  N 1 1 Y N N 175.106 0.824  243.433 1.897  -0.019 0.426  N1  8DP 7  
8DP C6  C5  C 0 1 Y N N 174.534 0.903  244.659 2.960  0.788  0.333  C6  8DP 8  
8DP O6  O1  O 0 1 N N N 173.760 4.413  242.491 -1.817 2.043  -1.809 O6  8DP 9  
8DP N4  N4  N 0 1 N N N 176.125 -0.449 241.770 0.964  -2.172 0.339  N4  8DP 10 
8DP C12 C6  C 0 1 Y N N 174.406 -0.245 245.474 4.277  0.215  0.035  C12 8DP 11 
8DP C13 C7  C 0 1 Y N N 175.552 -0.370 242.994 2.049  -1.316 0.248  C13 8DP 12 
8DP C14 C8  C 0 1 Y N N 175.419 -1.509 243.796 3.323  -1.865 -0.040 C14 8DP 13 
8DP C15 C9  C 0 1 N N N 175.889 -2.728 243.291 3.420  -3.331 -0.229 C15 8DP 14 
8DP C16 C10 C 0 1 N N N 176.557 -1.622 241.342 1.112  -3.495 0.159  C16 8DP 15 
8DP C1  C11 C 0 1 N N N 171.816 5.007  240.467 -3.932 0.984  -0.170 C1  8DP 16 
8DP C3  C12 C 0 1 N N S 173.130 3.421  241.744 -1.510 1.479  -0.533 C3  8DP 17 
8DP C7  C13 C 0 1 Y N N 174.071 2.143  245.111 2.849  2.173  0.514  C7  8DP 18 
8DP C9  C14 C 0 1 Y N N 173.359 1.071  247.196 5.228  2.409  0.118  C9  8DP 19 
8DP O1  O2  O 0 1 N N N 168.869 5.637  240.964 -7.256 -1.192 0.197  O1  8DP 20 
8DP P1  P1  P 0 1 N N N 169.540 5.849  239.596 -6.476 0.213  0.107  P1  8DP 21 
8DP O2  O3  O 0 1 N N N 168.594 5.569  238.380 -6.916 0.946  -1.101 O2  8DP 22 
8DP O3  O4  O 0 1 N N N 170.080 7.297  239.514 -6.801 1.092  1.416  O3  8DP 23 
8DP O4  O5  O 0 1 N N N 170.820 4.852  239.415 -4.891 -0.058 0.023  O4  8DP 24 
8DP O5  O6  O 0 1 N N N 172.707 3.022  239.365 -2.219 -0.180 1.075  O5  8DP 25 
8DP O7  O7  O 0 1 N N N 173.524 1.180  241.046 0.428  0.700  -1.622 O7  8DP 26 
8DP C10 C15 C 0 1 N N N 172.726 1.159  248.564 6.425  3.317  0.008  C10 8DP 27 
8DP C11 C16 C 0 1 Y N N 173.811 -0.152 246.745 5.389  1.074  -0.066 C11 8DP 28 
8DP O8  O8  O 0 1 N N N 175.777 -3.926 244.041 4.486  -3.858 -0.477 O8  8DP 29 
8DP N5  N5  N 0 1 N N N 176.453 -2.742 242.075 2.294  -4.067 -0.116 N5  8DP 30 
8DP O9  O9  O 0 1 N N N 177.159 -1.770 240.079 0.130  -4.206 0.249  O9  8DP 31 
8DP H1  H1  H 0 1 N N N 176.085 1.946  241.866 0.684  1.431  1.334  H1  8DP 32 
8DP H2  H2  H 0 1 N N N 175.338 2.955  243.151 -0.016 -0.204 1.266  H2  8DP 33 
8DP H3  H3  H 0 1 N N N 173.882 4.539  240.081 -2.480 -0.395 -0.963 H3  8DP 34 
8DP H4  H4  H 0 1 N N N 172.619 3.399  247.780 4.646  4.903  0.511  H4  8DP 35 
8DP H5  H5  H 0 1 N N N 173.761 4.164  246.898 2.998  4.732  0.789  H5  8DP 36 
8DP H6  H6  H 0 1 N N N 173.886 4.108  243.382 -1.795 1.406  -2.536 H6  8DP 37 
8DP H7  H7  H 0 1 N N N 176.220 0.367  241.199 0.085  -1.811 0.535  H7  8DP 38 
8DP H8  H8  H 0 1 N N N 172.236 6.022  240.410 -4.003 1.699  0.649  H8  8DP 39 
8DP H9  H9  H 0 1 N N N 171.326 4.866  241.442 -4.132 1.492  -1.114 H9  8DP 40 
8DP H10 H10 H 0 1 N N N 172.132 3.208  242.154 -1.556 2.258  0.229  H10 8DP 41 
8DP H11 H11 H 0 1 N N N 174.163 3.020  244.488 1.890  2.618  0.735  H11 8DP 42 
8DP H12 H12 H 0 1 N N N 167.968 5.364  240.836 -8.218 -1.105 0.250  H12 8DP 43 
8DP H13 H13 H 0 1 N N N 169.728 7.724  238.742 -6.539 0.672  2.247  H13 8DP 44 
8DP H14 H14 H 0 1 N N N 172.924 2.162  239.706 -2.240 0.457  1.802  H14 8DP 45 
8DP H15 H15 H 0 1 N N N 171.642 0.990  248.479 6.895  3.419  0.986  H15 8DP 46 
8DP H16 H16 H 0 1 N N N 173.165 0.394  249.221 7.141  2.891  -0.696 H16 8DP 47 
8DP H17 H17 H 0 1 N N N 172.909 2.157  248.989 6.107  4.297  -0.346 H17 8DP 48 
8DP H18 H18 H 0 1 N N N 173.709 -1.031 247.363 6.367  0.671  -0.285 H18 8DP 49 
8DP H19 H19 H 0 1 N N N 176.803 -3.603 241.707 2.340  -5.028 -0.237 H19 8DP 50 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8DP O2  P1  DOUB N N 1  
8DP O5  C2  SING N N 2  
8DP O4  P1  SING N N 3  
8DP O4  C1  SING N N 4  
8DP O3  P1  SING N N 5  
8DP P1  O1  SING N N 6  
8DP O9  C16 DOUB N N 7  
8DP C2  C1  SING N N 8  
8DP C2  C3  SING N N 9  
8DP O7  C4  DOUB N N 10 
8DP C16 N4  SING N N 11 
8DP C16 N5  SING N N 12 
8DP C4  C3  SING N N 13 
8DP C4  C5  SING N N 14 
8DP C3  O6  SING N N 15 
8DP N4  C13 SING N N 16 
8DP N5  C15 SING N N 17 
8DP C5  N1  SING N N 18 
8DP C13 N1  DOUB Y N 19 
8DP C13 C14 SING Y N 20 
8DP C15 C14 SING N N 21 
8DP C15 O8  DOUB N N 22 
8DP N1  C6  SING Y N 23 
8DP C14 N3  DOUB Y N 24 
8DP C6  C7  DOUB Y N 25 
8DP C6  C12 SING Y N 26 
8DP N3  C12 SING Y N 27 
8DP C7  C8  SING Y N 28 
8DP C12 C11 DOUB Y N 29 
8DP C8  N2  SING N N 30 
8DP C8  C9  DOUB Y N 31 
8DP C11 C9  SING Y N 32 
8DP C9  C10 SING N N 33 
8DP C5  H1  SING N N 34 
8DP C5  H2  SING N N 35 
8DP C2  H3  SING N N 36 
8DP N2  H4  SING N N 37 
8DP N2  H5  SING N N 38 
8DP O6  H6  SING N N 39 
8DP N4  H7  SING N N 40 
8DP C1  H8  SING N N 41 
8DP C1  H9  SING N N 42 
8DP C3  H10 SING N N 43 
8DP C7  H11 SING N N 44 
8DP O1  H12 SING N N 45 
8DP O3  H13 SING N N 46 
8DP O5  H14 SING N N 47 
8DP C10 H15 SING N N 48 
8DP C10 H16 SING N N 49 
8DP C10 H17 SING N N 50 
8DP C11 H18 SING N N 51 
8DP N5  H19 SING N N 52 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
8DP InChI            InChI                1.03  "InChI=1S/C16H18N5O9P/c1-6-2-8-9(3-7(6)17)21(14-12(18-8)15(25)20-16(26)19-14)4-10(22)13(24)11(23)5-30-31(27,28)29/h2-3,11,13,23-24H,4-5H2,1H3,(H5,17,19,20,25,26,27,28,29)/p+1/t11-,13+/m0/s1" 
8DP InChIKey         InChI                1.03  SDTLZDHOYFRAPQ-WCQYABFASA-O                                                                                                                                                                    
8DP SMILES_CANONICAL CACTVS               3.385 "Cc1cc2nc3C(=O)NC(=O)Nc3[n+](CC(=O)[C@@H](O)[C@@H](O)CO[P](O)(O)=O)c2cc1N"                                                                                                                     
8DP SMILES           CACTVS               3.385 "Cc1cc2nc3C(=O)NC(=O)Nc3[n+](CC(=O)[CH](O)[CH](O)CO[P](O)(O)=O)c2cc1N"                                                                                                                         
8DP SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1cc2c(cc1N)[n+](c3c(n2)C(=O)NC(=O)N3)CC(=O)[C@H]([C@H](COP(=O)(O)O)O)O"                                                                                                                     
8DP SMILES           "OpenEye OEToolkits" 2.0.6 "Cc1cc2c(cc1N)[n+](c3c(n2)C(=O)NC(=O)N3)CC(=O)C(C(COP(=O)(O)O)O)O"                                                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
8DP "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "[(2~{S},3~{S})-5-[8-azanyl-7-methyl-2,4-bis(oxidanylidene)-1~{H}-benzo[g]pteridin-10-ium-10-yl]-2,3-bis(oxidanyl)-4-oxidanylidene-pentyl] dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
8DP "Create component" 2016-12-06 EBI  
8DP "Initial release"  2017-12-20 RCSB 
# 
