data_F2P
# 
_chem_comp.id                                    F2P 
_chem_comp.name                                  1,6-DI-O-PHOSPHONO-D-ALLITOL 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C6 H16 O12 P2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2004-09-27 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        342.132 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     F2P 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1W8R 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
F2P P1   P1   P 0 1 N N N N N N 3.674  129.068 20.025 5.591  -0.053 -0.041 P1   F2P 1  
F2P O1   O1   O 0 1 N N N N N N 2.211  128.447 20.290 4.231  0.564  0.561  O1   F2P 2  
F2P C1   C1   C 0 1 N N N N N N 1.434  127.870 19.212 3.151  -0.061 -0.135 C1   F2P 3  
F2P C2   C2   C 0 1 N N R N N N 1.297  126.340 19.380 1.822  0.484  0.392  C2   F2P 4  
F2P O2   O2   O 0 1 N N N N N N 2.562  125.756 19.134 1.719  1.875  0.078  O2   F2P 5  
F2P C3   C3   C 0 1 N N R N N N 0.803  126.050 20.818 0.665  -0.273 -0.263 C3   F2P 6  
F2P O3   O3   O 0 1 N N N N N N -0.612 126.117 20.773 0.767  -1.663 0.050  O3   F2P 7  
F2P C4   C4   C 0 1 N N S N N N 1.181  124.737 21.516 -0.665 0.273  0.263  C4   F2P 8  
F2P O4   O4   O 0 1 N N N N N N 0.440  123.615 21.045 -0.767 1.663  -0.050 O4   F2P 9  
F2P C5   C5   C 0 1 N N S N N N 2.633  124.419 21.423 -1.822 -0.484 -0.392 C5   F2P 10 
F2P O5   O5   O 0 1 N N N N N N 3.445  125.390 22.009 -1.719 -1.875 -0.078 O5   F2P 11 
F2P C6   C6   C 0 1 N N N N N N 2.994  123.107 22.056 -3.151 0.061  0.135  C6   F2P 12 
F2P O6   O6   O 0 1 N N N N N N 3.764  122.550 21.000 -4.231 -0.564 -0.561 O6   F2P 13 
F2P O11  O11  O 0 1 N N N N N N 3.572  130.205 18.924 6.856  0.703  0.607  O11  F2P 14 
F2P O12  O12  O 0 1 N N N N N N 4.492  127.864 19.394 5.668  -1.623 0.308  O12  F2P 15 
F2P O13  O13  O 0 1 N N N N N N 4.253  129.558 21.409 5.608  0.128  -1.510 O13  F2P 16 
F2P P6   P6   P 0 1 N N N N N N 5.126  121.751 21.247 -5.591 0.053  0.041  P6   F2P 17 
F2P O61  O61  O 0 1 N N N N N N 6.057  122.536 22.241 -5.608 -0.128 1.510  O61  F2P 18 
F2P O62  O62  O 0 1 N N N N N N 4.762  120.335 21.833 -5.668 1.623  -0.308 O62  F2P 19 
F2P O63  O63  O 0 1 N N N N N N 5.780  121.646 19.806 -6.856 -0.703 -0.607 O63  F2P 20 
F2P H1C1 1H1C H 0 0 N N N N N N 1.855  128.137 18.215 3.190  -1.138 0.025  H1C1 F2P 21 
F2P H1C2 2H1C H 0 0 N N N N N N 0.438  128.363 19.115 3.234  0.152  -1.201 H1C2 F2P 22 
F2P H2   H2   H 0 1 N N N N N N 0.556  125.949 18.645 1.777  0.352  1.472  H2   F2P 23 
F2P HA   HA   H 0 1 N N N N N N 2.478  124.815 19.237 1.763  1.948  -0.885 HA   F2P 24 
F2P H3   H3   H 0 1 N N N N N N 1.156  126.886 21.466 0.709  -0.140 -1.344 H3   F2P 25 
F2P HB   HB   H 0 1 N N N N N N -0.915 125.939 21.656 0.723  -1.736 1.014  HB   F2P 26 
F2P H4   H4   H 0 1 N N N N N N 0.940  124.859 22.598 -0.709 0.140  1.344  H4   F2P 27 
F2P HC   HC   H 0 1 N N N N N N 0.674  122.802 21.477 -0.723 1.736  -1.014 HC   F2P 28 
F2P H5   H5   H 0 1 N N N N N N 2.900  124.360 20.342 -1.777 -0.352 -1.472 H5   F2P 29 
F2P HD   HD   H 0 1 N N N N N N 4.371  125.187 21.950 -1.763 -1.948 0.885  HD   F2P 30 
F2P H6C1 1H6C H 0 0 N N N N N N 2.143  122.488 22.424 -3.234 -0.152 1.201  H6C1 F2P 31 
F2P H6C2 2H6C H 0 0 N N N N N N 3.492  123.162 23.052 -3.190 1.138  -0.025 H6C2 F2P 32 
F2P H11  H11  H 0 1 N N N N N N 4.435  130.571 18.768 7.648  0.304  0.221  H11  F2P 33 
F2P H12  H12  H 0 1 N N N N N N 5.355  128.230 19.238 5.655  -1.696 1.272  H12  F2P 34 
F2P H62  H62  H 0 1 N N N N N N 5.572  119.860 21.980 -5.655 1.696  -1.272 H62  F2P 35 
F2P H63  H63  H 0 1 N N N N N N 6.590  121.171 19.953 -7.648 -0.304 -0.221 H63  F2P 36 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
F2P P1  O1   SING N N 1  
F2P P1  O11  SING N N 2  
F2P P1  O12  SING N N 3  
F2P P1  O13  DOUB N N 4  
F2P O1  C1   SING N N 5  
F2P C1  C2   SING N N 6  
F2P C1  H1C1 SING N N 7  
F2P C1  H1C2 SING N N 8  
F2P C2  O2   SING N N 9  
F2P C2  C3   SING N N 10 
F2P C2  H2   SING N N 11 
F2P O2  HA   SING N N 12 
F2P C3  O3   SING N N 13 
F2P C3  C4   SING N N 14 
F2P C3  H3   SING N N 15 
F2P O3  HB   SING N N 16 
F2P C4  O4   SING N N 17 
F2P C4  C5   SING N N 18 
F2P C4  H4   SING N N 19 
F2P O4  HC   SING N N 20 
F2P C5  O5   SING N N 21 
F2P C5  C6   SING N N 22 
F2P C5  H5   SING N N 23 
F2P O5  HD   SING N N 24 
F2P C6  O6   SING N N 25 
F2P C6  H6C1 SING N N 26 
F2P C6  H6C2 SING N N 27 
F2P O6  P6   SING N N 28 
F2P O11 H11  SING N N 29 
F2P O12 H12  SING N N 30 
F2P P6  O61  DOUB N N 31 
F2P P6  O62  SING N N 32 
F2P P6  O63  SING N N 33 
F2P O62 H62  SING N N 34 
F2P O63 H63  SING N N 35 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
F2P SMILES           ACDLabs              10.04 "O=P(O)(O)OCC(O)C(O)C(O)C(O)COP(=O)(O)O"                                                                                       
F2P SMILES_CANONICAL CACTVS               3.341 "O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@@H](O)[C@@H](O)CO[P](O)(O)=O"                                                                
F2P SMILES           CACTVS               3.341 "O[CH](CO[P](O)(O)=O)[CH](O)[CH](O)[CH](O)CO[P](O)(O)=O"                                                                       
F2P SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C([C@H]([C@H]([C@H]([C@H](COP(=O)(O)O)O)O)O)O)OP(=O)(O)O"                                                                     
F2P SMILES           "OpenEye OEToolkits" 1.5.0 "C(C(C(C(C(COP(=O)(O)O)O)O)O)O)OP(=O)(O)O"                                                                                     
F2P InChI            InChI                1.03  "InChI=1S/C6H16O12P2/c7-3(1-17-19(11,12)13)5(9)6(10)4(8)2-18-20(14,15)16/h3-10H,1-2H2,(H2,11,12,13)(H2,14,15,16)/t3-,4+,5-,6+" 
F2P InChIKey         InChI                1.03  WOYYTQHMNDWRCW-FBXFSONDSA-N                                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
F2P "SYSTEMATIC NAME" ACDLabs              10.04 1,6-di-O-phosphono-D-allitol                                                     
F2P "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3R,4S,5S)-2,3,4,5-tetrahydroxy-6-phosphonooxy-hexyl] dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
F2P "Create component"  2004-09-27 EBI  
F2P "Modify descriptor" 2011-06-04 RCSB 
F2P "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            F2P 
_pdbx_chem_comp_pcm.modified_residue_id                LYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C5 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   NZ 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
