data_MTP
#

_chem_comp.id                                   MTP
_chem_comp.name                                 "2-HYDROXYMETHYL-5-(6-METHYLSULFANYL-PURIN-9-YL)-TETRAHYDRO-FURAN-3,4-DIOL"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C11 H14 N4 O4 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        9-BETA-D-RIBOFURANOSYL-6-METHYLTHIOPURINE
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2003-06-23
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       298.318
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    MTP
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1PR4
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
MTP  "O5'"   "O5'"   O  0  1  N  N  N  93.442  65.549  17.394  -4.972  -2.301   0.952  "O5'"   MTP   1  
MTP  "C5'"   "C5'"   C  0  1  N  N  N  92.968  64.506  18.224  -4.766  -1.381  -0.121  "C5'"   MTP   2  
MTP  "C4'"   "C4'"   C  0  1  N  N  R  93.438  64.680  19.668  -3.758  -0.313   0.309  "C4'"   MTP   3  
MTP  "O4'"   "O4'"   O  0  1  N  N  N  92.984  65.898  20.289  -2.455  -0.902   0.510  "O4'"   MTP   4  
MTP  "C1'"   "C1'"   C  0  1  N  N  R  91.650  65.735  20.861  -1.522   0.196   0.418  "C1'"   MTP   5  
MTP  N9      N9      N  0  1  Y  N  N  90.757  66.585  20.004  -0.177  -0.301   0.116  N9      MTP   6  
MTP  C8      C8      C  0  1  Y  N  N  90.630  67.926  19.681   0.130  -1.496  -0.463  C8      MTP   7  
MTP  N7      N7      N  0  1  Y  N  N  89.612  68.132  18.810   1.420  -1.613  -0.583  N7      MTP   8  
MTP  C5      C5      C  0  1  Y  N  N  89.078  66.923  18.566   2.021  -0.502  -0.096  C5      MTP   9  
MTP  C6      C6      C  0  1  Y  N  N  87.993  66.659  17.702   3.355  -0.079   0.042  C6      MTP  10  
MTP  S6      S6      S  0  1  N  N  N  87.105  67.917  16.738   4.685  -1.097  -0.504  S6      MTP  11  
MTP  CS      CS      C  0  1  N  N  N  85.891  66.786  15.902   6.088  -0.038  -0.076  CS      MTP  12  
MTP  N1      N1      N  0  1  Y  N  N  87.645  65.337  17.632   3.589   1.110   0.591  N1      MTP  13  
MTP  C2      C2      C  0  1  Y  N  N  88.318  64.401  18.349   2.598   1.879   1.003  C2      MTP  14  
MTP  N3      N3      N  0  1  Y  N  N  89.370  64.595  19.192   1.335   1.522   0.898  N3      MTP  15  
MTP  C4      C4      C  0  1  Y  N  N  89.718  65.930  19.260   1.004   0.352   0.363  C4      MTP  16  
MTP  "C2'"   "C2'"   C  0  1  N  N  R  91.623  64.196  21.104  -2.047   1.068  -0.744  "C2'"   MTP  17  
MTP  "O2'"   "O2'"   O  0  1  N  N  N  91.434  64.059  22.500  -1.865   2.456  -0.459  "O2'"   MTP  18  
MTP  "C3'"   "C3'"   C  0  1  N  N  S  92.970  63.606  20.610  -3.553   0.723  -0.819  "C3'"   MTP  19  
MTP  "O3'"   "O3'"   O  0  1  N  N  N  93.961  63.502  21.629  -4.347   1.887  -0.579  "O3'"   MTP  20  
MTP  "H5'"   "H5'"   H  0  1  N  N  N  93.150  65.441  16.497  -5.612  -2.956   0.640  "H5'"   MTP  21  
MTP  "H5'1"  "1H5'"  H  0  0  N  N  N  93.250  63.505  17.822  -5.712  -0.905  -0.378  "H5'1"  MTP  22  
MTP  "H5'2"  "2H5'"  H  0  0  N  N  N  91.859  64.410  18.165  -4.380  -1.915  -0.989  "H5'2"  MTP  23  
MTP  "H4'"   "H4'"   H  0  1  N  N  N  94.545  64.660  19.534  -4.095   0.181   1.221  "H4'"   MTP  24  
MTP  "H1'"   "H1'"   H  0  1  N  N  N  91.283  66.113  21.844  -1.515   0.766   1.347  "H1'"   MTP  25  
MTP  H8      H8      H  0  1  N  N  N  91.267  68.737  20.073  -0.592  -2.237  -0.775  H8      MTP  26  
MTP  HS1     1HS     H  0  1  N  N  N  85.275  66.135  16.565   6.087   0.151   0.998  HS1     MTP  27  
MTP  HS2     2HS     H  0  1  N  N  N  85.346  67.558  15.310   7.017  -0.534  -0.356  HS2     MTP  28  
MTP  HS3     3HS     H  0  1  N  N  N  86.316  65.927  15.333   6.006   0.909  -0.611  HS3     MTP  29  
MTP  H2      H2      H  0  1  N  N  N  87.969  63.361  18.233   2.833   2.837   1.443  H2      MTP  30  
MTP  "H2'"   "H2'"   H  0  1  N  N  N  90.819  63.650  20.557  -1.548   0.801  -1.676  "H2'"   MTP  31  
MTP  H1      H1      H  0  1  N  N  N  91.418  63.121  22.648  -2.266   2.946  -1.190  H1      MTP  32  
MTP  "H3'"   "H3'"   H  0  1  N  N  N  92.831  62.578  20.201  -3.799   0.287  -1.787  "H3'"   MTP  33  
MTP  H3      H3      H  0  1  N  N  N  93.665  62.823  22.224  -5.270   1.600  -0.577  H3      MTP  34  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
MTP  "O5'"  "C5'"   SING  N  N   1  
MTP  "O5'"  "H5'"   SING  N  N   2  
MTP  "C5'"  "C4'"   SING  N  N   3  
MTP  "C5'"  "H5'1"  SING  N  N   4  
MTP  "C5'"  "H5'2"  SING  N  N   5  
MTP  "C4'"  "O4'"   SING  N  N   6  
MTP  "C4'"  "C3'"   SING  N  N   7  
MTP  "C4'"  "H4'"   SING  N  N   8  
MTP  "O4'"  "C1'"   SING  N  N   9  
MTP  "C1'"  N9      SING  N  N  10  
MTP  "C1'"  "C2'"   SING  N  N  11  
MTP  "C1'"  "H1'"   SING  N  N  12  
MTP  N9     C8      SING  Y  N  13  
MTP  N9     C4      SING  Y  N  14  
MTP  C8     N7      DOUB  Y  N  15  
MTP  C8     H8      SING  N  N  16  
MTP  N7     C5      SING  Y  N  17  
MTP  C5     C6      DOUB  Y  N  18  
MTP  C5     C4      SING  Y  N  19  
MTP  C6     S6      SING  N  N  20  
MTP  C6     N1      SING  Y  N  21  
MTP  S6     CS      SING  N  N  22  
MTP  CS     HS1     SING  N  N  23  
MTP  CS     HS2     SING  N  N  24  
MTP  CS     HS3     SING  N  N  25  
MTP  N1     C2      DOUB  Y  N  26  
MTP  C2     N3      SING  Y  N  27  
MTP  C2     H2      SING  N  N  28  
MTP  N3     C4      DOUB  Y  N  29  
MTP  "C2'"  "O2'"   SING  N  N  30  
MTP  "C2'"  "C3'"   SING  N  N  31  
MTP  "C2'"  "H2'"   SING  N  N  32  
MTP  "O2'"  H1      SING  N  N  33  
MTP  "C3'"  "O3'"   SING  N  N  34  
MTP  "C3'"  "H3'"   SING  N  N  35  
MTP  "O3'"  H3      SING  N  N  36  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
MTP  SMILES            ACDLabs               10.04  "n2c1c(ncnc1SC)n(c2)C3OC(C(O)C3O)CO"  
MTP  SMILES_CANONICAL  CACTVS                3.341  "CSc1ncnc2n(cnc12)[C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O"  
MTP  SMILES            CACTVS                3.341  "CSc1ncnc2n(cnc12)[CH]3O[CH](CO)[CH](O)[CH]3O"  
MTP  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CSc1c2c(ncn1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)O"  
MTP  SMILES            "OpenEye OEToolkits"  1.5.0  "CSc1c2c(ncn1)n(cn2)C3C(C(C(O3)CO)O)O"  
MTP  InChI             InChI                 1.03   "InChI=1S/C11H14N4O4S/c1-20-10-6-9(12-3-13-10)15(4-14-6)11-8(18)7(17)5(2-16)19-11/h3-5,7-8,11,16-18H,2H2,1H3/t5-,7-,8-,11-/m1/s1"  
MTP  InChIKey          InChI                 1.03   ZDRFDHHANOYUTE-IOSLPCCCSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
MTP  "SYSTEMATIC NAME"  ACDLabs               10.04  "6-(methylsulfanyl)-9-beta-D-ribofuranosyl-9H-purine"  
MTP  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2R,3S,4R,5R)-2-(hydroxymethyl)-5-(6-methylsulfanylpurin-9-yl)oxolane-3,4-diol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
MTP  "Create component"   2003-06-23  RCSB  
MTP  "Modify descriptor"  2011-06-04  RCSB  
MTP  "Modify synonyms"    2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     MTP
_pdbx_chem_comp_synonyms.name        9-BETA-D-RIBOFURANOSYL-6-METHYLTHIOPURINE
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
