data_OZP
#

_chem_comp.id                                   OZP
_chem_comp.name                                 "9-(5-{[(3S)-3-amino-3-carboxypropyl][3-(3-carbamoylphenyl)propyl]amino}-5-deoxy-alpha-D-ribofuranosyl)-9H-purin-6-amine"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C24 H32 N8 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-07-22
_chem_comp.pdbx_modified_date                   2019-11-22
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       528.561
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    OZP
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6PVE
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
OZP  C1   C1   C  0  1  Y  N  N   3.019   1.551  -11.190  -4.954  -2.177   1.074  C1   OZP   1  
OZP  C2   C2   C  0  1  Y  N  N   2.362   2.073  -10.074  -5.061  -0.814   0.748  C2   OZP   2  
OZP  C4   C3   C  0  1  Y  N  N   4.386   2.108   -8.945  -7.161  -0.775   1.681  C4   OZP   3  
OZP  C6   C4   C  0  1  Y  N  N   4.406   1.318  -11.124  -6.036  -2.790   1.728  C6   OZP   4  
OZP  C8   C5   C  0  1  Y  N  N   0.914   1.769  -11.658  -3.111  -1.602   0.086  C8   OZP   5  
OZP  C10  C6   C  0  1  N  N  S  -0.070   2.675   -9.583  -3.523   0.841  -0.392  C10  OZP   6  
OZP  C12  C7   C  0  1  N  N  R  -1.069   2.995   -7.421  -1.711   0.562  -1.807  C12  OZP   7  
OZP  C13  C8   C  0  1  N  N  S  -1.301   4.064   -8.147  -2.816   1.183  -2.700  C13  OZP   8  
OZP  C14  C9   C  0  1  N  N  R  -0.407   3.949   -9.547  -4.078   1.012  -1.819  C14  OZP   9  
OZP  C15  C10  C  0  1  N  N  N  -2.343   2.085   -7.375  -0.340   1.137  -2.169  C15  OZP  10  
OZP  C18  C11  C  0  1  N  N  N  -3.188   2.331   -5.079   0.640   0.912   0.033  C18  OZP  11  
OZP  C19  C12  C  0  1  N  N  N  -2.941   3.582   -4.186   0.747   2.437   0.095  C19  OZP  12  
OZP  C20  C13  C  0  1  N  N  S  -2.855   3.308   -2.656   0.823   2.884   1.556  C20  OZP  13  
OZP  N21  N1   N  0  1  N  N  N  -1.715   2.447   -2.335  -0.438   2.555   2.234  N21  OZP  14  
OZP  C24  C14  C  0  1  N  N  N  -4.722   2.672   -7.011   2.031   0.702  -1.938  C24  OZP  15  
OZP  C25  C15  C  0  1  N  N  N  -5.328   1.301   -6.701   3.020  -0.299  -1.339  C25  OZP  16  
OZP  C26  C16  C  0  1  N  N  N  -6.706   1.154   -7.442   4.429   0.004  -1.855  C26  OZP  17  
OZP  C27  C17  C  0  1  Y  N  N  -7.543  -0.062   -7.011   5.403  -0.982  -1.265  C27  OZP  18  
OZP  C28  C18  C  0  1  Y  N  N  -7.364  -1.281   -7.680   6.026  -0.700  -0.066  C28  OZP  19  
OZP  C29  C19  C  0  1  Y  N  N  -8.120  -2.385   -7.321   6.928  -1.615   0.479  C29  OZP  20  
OZP  C30  C20  C  0  1  Y  N  N  -9.050  -2.291   -6.289   7.195  -2.809  -0.193  C30  OZP  21  
OZP  C31  C21  C  0  1  Y  N  N  -9.224  -1.073   -5.620   6.566  -3.077  -1.391  C31  OZP  22  
OZP  C32  C22  C  0  1  Y  N  N  -8.468   0.043   -5.985   5.668  -2.169  -1.923  C32  OZP  23  
OZP  C33  C23  C  0  1  N  N  N  -7.920  -3.713   -8.068   7.600  -1.320   1.763  C33  OZP  24  
OZP  C36  C24  C  0  1  N  N  N  -4.121   2.671   -2.178   1.051   4.373   1.614  C36  OZP  25  
OZP  N16  N2   N  0  1  N  N  N  -3.301   2.780   -6.494   0.697   0.473  -1.368  N16  OZP  26  
OZP  N17  N3   N  0  1  N  N  N   5.154   0.741  -12.330  -5.988  -4.129   2.074  N17  OZP  27  
OZP  N3   N4   N  0  1  Y  N  N   3.078   2.340   -8.973  -6.172  -0.159   1.068  N3   OZP  28  
OZP  N34  N5   N  0  1  N  N  N  -6.600  -4.130   -8.447   8.471  -2.205   2.287  N34  OZP  29  
OZP  N5   N6   N  0  1  Y  N  N   5.041   1.606   -9.999  -7.107  -2.053   2.007  N5   OZP  30  
OZP  N7   N7   N  0  1  Y  N  N   2.091   1.382  -12.126  -3.742  -2.597   0.639  N7   OZP  31  
OZP  N9   N8   N  0  1  Y  N  N   1.069   2.212  -10.416  -3.884  -0.480   0.128  N9   OZP  32  
OZP  O11  O1   O  0  1  N  N  N   0.137   2.266   -8.092  -2.092   0.960  -0.473  O11  OZP  33  
OZP  O22  O2   O  0  1  N  N  N  -0.880   5.213   -7.406  -2.947   0.461  -3.925  O22  OZP  34  
OZP  O23  O3   O  0  1  N  N  N   0.679   4.868   -9.500  -4.808  -0.151  -2.214  O23  OZP  35  
OZP  O35  O4   O  0  1  N  N  N  -8.851  -4.372   -8.337   7.366  -0.279   2.346  O35  OZP  36  
OZP  O37  O5   O  0  1  N  N  N  -5.212   3.054   -2.622   0.124   5.119   1.824  O37  OZP  37  
OZP  O38  O6   O  0  1  N  N  N  -4.080   1.775   -1.337   2.285   4.870   1.433  O38  OZP  38  
OZP  H1   H1   H  0  1  N  N  N   4.938   2.331   -8.044  -8.051  -0.213   1.926  H1   OZP  39  
OZP  H2   H2   H  0  1  N  N  N  -0.020   1.730  -12.199  -2.122  -1.658  -0.343  H2   OZP  40  
OZP  H3   H3   H  0  1  N  N  N  -0.945   2.100   -9.921  -3.924   1.620   0.257  H3   OZP  41  
OZP  H4   H4   H  0  1  N  N  N  -0.789   3.250   -6.388  -1.707  -0.524  -1.900  H4   OZP  42  
OZP  H5   H5   H  0  1  N  N  N  -2.359   4.156   -8.435  -2.615   2.237  -2.891  H5   OZP  43  
OZP  H6   H6   H  0  1  N  N  N  -1.080   4.210  -10.377  -4.711   1.897  -1.879  H6   OZP  44  
OZP  H7   H7   H  0  1  N  N  N  -2.766   1.967   -8.383  -0.144   0.969  -3.228  H7   OZP  45  
OZP  H8   H8   H  0  1  N  N  N  -2.093   1.096   -6.964  -0.328   2.207  -1.963  H8   OZP  46  
OZP  H9   H9   H  0  1  N  N  N  -4.119   1.833   -4.772   1.467   0.467   0.587  H9   OZP  47  
OZP  H10  H10  H  0  1  N  N  N  -2.346   1.630   -4.978  -0.305   0.596   0.475  H10  OZP  48  
OZP  H11  H11  H  0  1  N  N  N  -1.993   4.042   -4.502   1.646   2.759  -0.431  H11  OZP  49  
OZP  H12  H12  H  0  1  N  N  N  -3.766   4.289   -4.358  -0.129   2.882  -0.377  H12  OZP  50  
OZP  H13  H13  H  0  1  N  N  N  -2.732   4.274   -2.145   1.647   2.370   2.051  H13  OZP  51  
OZP  H14  H14  H  0  1  N  N  N  -1.684   2.288   -1.348  -0.390   2.782   3.216  H14  OZP  52  
OZP  H15  H15  H  0  1  N  N  N  -1.813   1.573   -2.810  -1.218   3.020   1.793  H15  OZP  53  
OZP  H17  H17  H  0  1  N  N  N  -4.719   2.823   -8.101   2.355   1.717  -1.707  H17  OZP  54  
OZP  H18  H18  H  0  1  N  N  N  -5.336   3.450   -6.535   1.991   0.571  -3.019  H18  OZP  55  
OZP  H19  H19  H  0  1  N  N  N  -5.484   1.206   -5.616   3.007  -0.217  -0.252  H19  OZP  56  
OZP  H20  H20  H  0  1  N  N  N  -4.642   0.512   -7.043   2.737  -1.310  -1.631  H20  OZP  57  
OZP  H21  H21  H  0  1  N  N  N  -6.507   1.068   -8.520   4.442  -0.077  -2.942  H21  OZP  58  
OZP  H22  H22  H  0  1  N  N  N  -7.297   2.062   -7.249   4.713   1.015  -1.563  H22  OZP  59  
OZP  H23  H23  H  0  1  N  N  N  -6.637  -1.359   -8.475   5.816   0.225   0.449  H23  OZP  60  
OZP  H24  H24  H  0  1  N  N  N  -9.635  -3.154   -6.006   7.893  -3.520   0.223  H24  OZP  61  
OZP  H25  H25  H  0  1  N  N  N  -9.945  -0.997   -4.819   6.772  -4.001  -1.912  H25  OZP  62  
OZP  H26  H26  H  0  1  N  N  N  -8.604   0.983   -5.470   5.174  -2.386  -2.859  H26  OZP  63  
OZP  H28  H28  H  0  1  N  N  N   6.123   0.641  -12.105  -5.201  -4.656   1.865  H28  OZP  64  
OZP  H29  H29  H  0  1  N  N  N   4.772  -0.153  -12.563  -6.742  -4.541   2.525  H29  OZP  65  
OZP  H30  H30  H  0  1  N  N  N  -6.470  -4.988   -8.944   8.657  -3.035   1.822  H30  OZP  66  
OZP  H31  H31  H  0  1  N  N  N  -5.810  -3.563   -8.214   8.911  -2.011   3.129  H31  OZP  67  
OZP  H32  H32  H  0  1  N  N  N  -1.390   5.279   -6.607  -3.626   0.812  -4.518  H32  OZP  68  
OZP  H33  H33  H  0  1  N  N  N   0.342   5.756   -9.477  -5.181  -0.098  -3.105  H33  OZP  69  
OZP  H34  H34  H  0  1  N  N  N  -4.963   1.487   -1.137   2.382   5.831   1.480  H34  OZP  70  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
OZP  N17  C6   SING  N  N   1  
OZP  N7   C8   DOUB  Y  N   2  
OZP  N7   C1   SING  Y  N   3  
OZP  C8   N9   SING  Y  N   4  
OZP  C1   C6   DOUB  Y  N   5  
OZP  C1   C2   SING  Y  N   6  
OZP  C6   N5   SING  Y  N   7  
OZP  N9   C2   SING  Y  N   8  
OZP  N9   C10  SING  N  N   9  
OZP  C2   N3   DOUB  Y  N  10  
OZP  N5   C4   DOUB  Y  N  11  
OZP  C10  C14  SING  N  N  12  
OZP  C10  O11  SING  N  N  13  
OZP  C14  O23  SING  N  N  14  
OZP  C14  C13  SING  N  N  15  
OZP  N3   C4   SING  Y  N  16  
OZP  N34  C33  SING  N  N  17  
OZP  O35  C33  DOUB  N  N  18  
OZP  C13  C12  SING  N  N  19  
OZP  C13  O22  SING  N  N  20  
OZP  O11  C12  SING  N  N  21  
OZP  C33  C29  SING  N  N  22  
OZP  C28  C29  DOUB  Y  N  23  
OZP  C28  C27  SING  Y  N  24  
OZP  C26  C27  SING  N  N  25  
OZP  C26  C25  SING  N  N  26  
OZP  C12  C15  SING  N  N  27  
OZP  C15  N16  SING  N  N  28  
OZP  C29  C30  SING  Y  N  29  
OZP  C24  C25  SING  N  N  30  
OZP  C24  N16  SING  N  N  31  
OZP  C27  C32  DOUB  Y  N  32  
OZP  N16  C18  SING  N  N  33  
OZP  C30  C31  DOUB  Y  N  34  
OZP  C32  C31  SING  Y  N  35  
OZP  C18  C19  SING  N  N  36  
OZP  C19  C20  SING  N  N  37  
OZP  C20  N21  SING  N  N  38  
OZP  C20  C36  SING  N  N  39  
OZP  O37  C36  DOUB  N  N  40  
OZP  C36  O38  SING  N  N  41  
OZP  C4   H1   SING  N  N  42  
OZP  C8   H2   SING  N  N  43  
OZP  C10  H3   SING  N  N  44  
OZP  C12  H4   SING  N  N  45  
OZP  C13  H5   SING  N  N  46  
OZP  C14  H6   SING  N  N  47  
OZP  C15  H7   SING  N  N  48  
OZP  C15  H8   SING  N  N  49  
OZP  C18  H9   SING  N  N  50  
OZP  C18  H10  SING  N  N  51  
OZP  C19  H11  SING  N  N  52  
OZP  C19  H12  SING  N  N  53  
OZP  C20  H13  SING  N  N  54  
OZP  N21  H14  SING  N  N  55  
OZP  N21  H15  SING  N  N  56  
OZP  C24  H17  SING  N  N  57  
OZP  C24  H18  SING  N  N  58  
OZP  C25  H19  SING  N  N  59  
OZP  C25  H20  SING  N  N  60  
OZP  C26  H21  SING  N  N  61  
OZP  C26  H22  SING  N  N  62  
OZP  C28  H23  SING  N  N  63  
OZP  C30  H24  SING  N  N  64  
OZP  C31  H25  SING  N  N  65  
OZP  C32  H26  SING  N  N  66  
OZP  N17  H28  SING  N  N  67  
OZP  N17  H29  SING  N  N  68  
OZP  N34  H30  SING  N  N  69  
OZP  N34  H31  SING  N  N  70  
OZP  O22  H32  SING  N  N  71  
OZP  O23  H33  SING  N  N  72  
OZP  O38  H34  SING  N  N  73  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
OZP  SMILES            ACDLabs               12.01  "c12c(ncnc1n(cn2)C4C(C(C(CN(CCC(N)C(O)=O)CCCc3cccc(c3)C(N)=O)O4)O)O)N"  
OZP  InChI             InChI                 1.03   "InChI=1S/C24H32N8O6/c25-15(24(36)37)6-8-31(7-2-4-13-3-1-5-14(9-13)21(27)35)10-16-18(33)19(34)23(38-16)32-12-30-17-20(26)28-11-29-22(17)32/h1,3,5,9,11-12,15-16,18-19,23,33-34H,2,4,6-8,10,25H2,(H2,27,35)(H,36,37)(H2,26,28,29)/t15-,16+,18+,19+,23-/m0/s1"  
OZP  InChIKey          InChI                 1.03   VSETVFOQAVXGIV-LWXSJTDASA-N  
OZP  SMILES_CANONICAL  CACTVS                3.385  "N[C@@H](CCN(CCCc1cccc(c1)C(N)=O)C[C@H]2O[C@@H]([C@H](O)[C@@H]2O)n3cnc4c(N)ncnc34)C(O)=O"  
OZP  SMILES            CACTVS                3.385  "N[CH](CCN(CCCc1cccc(c1)C(N)=O)C[CH]2O[CH]([CH](O)[CH]2O)n3cnc4c(N)ncnc34)C(O)=O"  
OZP  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc(cc(c1)C(=O)N)CCCN(CC[C@@H](C(=O)O)N)C[C@@H]2[C@H]([C@H]([C@H](O2)n3cnc4c3ncnc4N)O)O"  
OZP  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc(cc(c1)C(=O)N)CCCN(CCC(C(=O)O)N)CC2C(C(C(O2)n3cnc4c3ncnc4N)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
OZP  "SYSTEMATIC NAME"  ACDLabs               12.01  "9-(5-{[(3S)-3-amino-3-carboxypropyl][3-(3-carbamoylphenyl)propyl]amino}-5-deoxy-alpha-D-ribofuranosyl)-9H-purin-6-amine"  
OZP  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(2~{S})-4-[3-(3-aminocarbonylphenyl)propyl-[[(2~{R},3~{S},4~{R},5~{S})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl]amino]-2-azanyl-butanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
OZP  "Create component"  2019-07-22  RCSB  
OZP  "Initial release"   2019-11-27  RCSB  
##
