data_QIP
# 
_chem_comp.id                                    QIP 
_chem_comp.name                                  "2-[(2~{S})-2-(3-methylsulfanylpropanimidoyl)-2-oxidanyl-4-oxidanylidene-imidazolidin-1-yl]-2-oxidanylidene-ethanamide" 
_chem_comp.type                                  "L-peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C9 H14 N4 O4 S" 
_chem_comp.mon_nstd_parent_comp_id               "MET, TYR, GLY" 
_chem_comp.pdbx_synonyms                         "CHROMOPHORE (MET-TYR-GLY)" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-11-01 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        274.297 
_chem_comp.one_letter_code                       MYG 
_chem_comp.three_letter_code                     QIP 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8B7G 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
QIP O1  O1  O 0 1 N N N Y N N -9.018  -22.205 25.570 -0.355 0.565  -2.091 O1  QIP 1  
QIP CB1 C3  C 0 1 N N N N N N -10.345 -20.630 23.797 2.167  0.343  -0.407 CB1 QIP 2  
QIP OB2 O2  O 0 1 N N N Y N Y -7.123  -22.919 26.419 -4.110 -0.659 0.881  OB2 QIP 3  
QIP CG1 C4  C 0 1 N N N N N N -11.728 -21.382 23.720 3.143  -0.550 0.362  CG1 QIP 4  
QIP SD  S1  S 0 1 N N N N N N -12.482 -21.907 22.076 4.846  -0.100 -0.074 SD  QIP 5  
QIP CE  C5  C 0 1 N N N N N N -14.168 -21.693 22.747 5.838  -1.248 0.920  CE  QIP 6  
QIP C1  C6  C 0 1 N N S Y N N -8.646  -20.907 25.859 -0.404 0.706  -0.670 C1  QIP 7  
QIP C2  C7  C 0 1 N N N Y N N -6.232  -21.125 25.280 -2.116 -1.104 -0.279 C2  QIP 8  
QIP C3  C8  C 0 1 N N N Y N N -7.940  -19.405 27.379 -1.446 2.481  0.363  C3  QIP 9  
QIP CA1 C10 C 0 1 N N N Y N N -9.627  -20.138 25.157 0.753  -0.030 -0.045 CA1 QIP 10 
QIP CA2 C11 C 0 1 N N N Y N Y -6.220  -22.498 25.781 -3.438 -1.487 0.302  CA2 QIP 11 
QIP CA3 C12 C 0 1 N N N Y N N -7.078  -19.078 26.116 -2.352 1.283  0.502  CA3 QIP 12 
QIP N1  N1  N 0 1 N N N Y Y N -9.953  -18.865 25.383 0.534  -0.971 0.794  N1  QIP 13 
QIP N2  N2  N 0 1 N N N N N N -5.142  -23.111 25.529 -3.884 -2.754 0.185  N2  QIP 14 
QIP N3  N3  N 0 1 N N N Y N N -7.259  -20.374 25.499 -1.670 0.163  -0.162 N3  QIP 15 
QIP N   N4  N 0 1 N Y N Y N N -8.510  -20.631 27.283 -0.342 2.122  -0.311 N   QIP 16 
QIP O2  O4  O 0 1 N N N N N N -5.213  -20.818 24.634 -1.444 -1.932 -0.857 O2  QIP 17 
QIP O3  O5  O 0 1 N N N N N N -8.230  -18.554 28.289 -1.679 3.592  0.790  O3  QIP 18 
QIP H1  H1  H 0 1 N N N Y N N -8.332  -22.801 25.848 0.458  0.903  -2.492 H1  QIP 19 
QIP H8  H8  H 0 1 N N N N N N -14.906 -21.941 21.970 6.897  -1.067 0.735  H8  QIP 20 
QIP H9  H9  H 0 1 N N N N N N -14.306 -22.360 23.611 5.622  -1.094 1.977  H9  QIP 21 
QIP H10 H10 H 0 1 N N N N N N -14.306 -20.649 23.064 5.592  -2.274 0.645  H10 QIP 22 
QIP H14 H14 H 0 1 N N N Y N N -6.027  -18.861 26.358 -2.507 1.054  1.557  H14 QIP 23 
QIP H15 H15 H 0 1 N N N Y N N -7.493  -18.255 25.515 -3.308 1.479  0.018  H15 QIP 24 
QIP H11 H16 H 0 1 N Y N Y Y N -9.421  -18.469 26.131 -0.376 -1.212 1.027  H11 QIP 25 
QIP H   H19 H 0 1 N N N N N N -4.999  -24.036 25.881 -3.347 -3.416 -0.277 H   QIP 26 
QIP H2  H20 H 0 1 N N N N N N -4.433  -22.670 24.978 -4.742 -3.003 0.562  H2  QIP 27 
QIP H5  H5  H 0 1 N N N N N N -9.621  -21.300 23.310 2.346  1.386  -0.146 H5  QIP 28 
QIP H7  H7  H 0 1 N N N N N N -10.472 -19.722 23.189 2.316  0.206  -1.478 H7  QIP 29 
QIP H12 H12 H 0 1 N N N N N N -12.465 -20.723 24.201 2.994  -0.413 1.433  H12 QIP 30 
QIP H13 H13 H 0 1 N N N N N N -11.614 -22.300 24.315 2.964  -1.593 0.100  H13 QIP 31 
QIP H3  H3  H 0 1 N Y N Y N N -8.783  -21.227 28.038 0.393  2.717  -0.529 H3  QIP 32 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
QIP SD  CE  SING N N 1  
QIP SD  CG1 SING N N 2  
QIP CG1 CB1 SING N N 3  
QIP CB1 CA1 SING N N 4  
QIP O2  C2  DOUB N N 5  
QIP CA1 N1  DOUB N N 6  
QIP CA1 C1  SING N N 7  
QIP C2  N3  SING N N 8  
QIP C2  CA2 SING N N 9  
QIP N3  C1  SING N N 10 
QIP N3  CA3 SING N N 11 
QIP N2  CA2 SING N N 12 
QIP O1  C1  SING N N 13 
QIP CA2 OB2 DOUB N N 14 
QIP C1  N   SING N N 15 
QIP CA3 C3  SING N N 16 
QIP N   C3  SING N N 17 
QIP C3  O3  DOUB N N 18 
QIP O1  H1  SING N N 19 
QIP CE  H8  SING N N 20 
QIP CE  H9  SING N N 21 
QIP CE  H10 SING N N 22 
QIP CA3 H14 SING N N 23 
QIP CA3 H15 SING N N 24 
QIP N1  H11 SING N N 25 
QIP N2  H   SING N N 26 
QIP N2  H2  SING N N 27 
QIP CB1 H5  SING N N 28 
QIP CB1 H7  SING N N 29 
QIP CG1 H12 SING N N 30 
QIP CG1 H13 SING N N 31 
QIP N   H3  SING N N 32 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
QIP InChI            InChI                1.06    "InChI=1S/C9H14N4O4S/c1-18-3-2-5(10)9(17)12-6(14)4-13(9)8(16)7(11)15/h10,17H,2-4H2,1H3,(H2,11,15)(H,12,14)/b10-5-/t9-/m0/s1" 
QIP InChIKey         InChI                1.06    IAJSNMSZNKJHRX-QFQXNISHSA-N                                                                                                  
QIP SMILES_CANONICAL CACTVS               3.385   "CSCCC(=N)[C@]1(O)NC(=O)CN1C(=O)C(N)=O"                                                                                      
QIP SMILES           CACTVS               3.385   "CSCCC(=N)[C]1(O)NC(=O)CN1C(=O)C(N)=O"                                                                                       
QIP SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "[H]/N=C(/CCSC)\[C@@]1(NC(=O)CN1C(=O)C(=O)N)O"                                                                               
QIP SMILES           "OpenEye OEToolkits" 3.1.0.0 "CSCCC(=N)C1(NC(=O)CN1C(=O)C(=O)N)O"                                                                                         
# 
_pdbx_chem_comp_identifier.comp_id           QIP 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   3.1.0.0 
_pdbx_chem_comp_identifier.identifier        "2-[(2~{S})-2-(3-methylsulfanylpropanimidoyl)-2-oxidanyl-4-oxidanylidene-imidazolidin-1-yl]-2-oxidanylidene-ethanamide" 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      QIP 
_pdbx_chem_comp_synonyms.name         "CHROMOPHORE (MET-TYR-GLY)" 
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
QIP "Create component" 2022-11-18 PDBE 
QIP "Initial release"  2023-04-05 RCSB 
QIP "Modify backbone"  2024-09-26 PDBE 
QIP "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            QIP 
_pdbx_chem_comp_pcm.modified_residue_id                "MET, TYR, GLY" 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Chromophore/chromophore-like 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain and backbone" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
