data_RDP
# 
_chem_comp.id                                    RDP 
_chem_comp.name                                  ALPHA-D-RIBOSE-1-PHOSPHATE 
_chem_comp.type                                  D-SACCHARIDE 
_chem_comp.pdbx_type                             ATOMS 
_chem_comp.formula                               "C5 H11 O8 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2003-12-19 
_chem_comp.pdbx_modified_date                    2008-10-14 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   OBS 
_chem_comp.pdbx_replaced_by                      R1P 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        230.110 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     RDP 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
RDP O1P    O1P  O 0 1 N N N -31.002 -10.624 44.548 -2.527 0.009  -1.545 O1P    RDP 1  
RDP P      P    P 0 1 N N N -30.868 -11.476 43.321 -2.414 0.136  -0.074 P      RDP 2  
RDP O2P    O2P  O 0 1 N N N -31.059 -10.706 42.029 -3.789 -0.345 0.612  O2P    RDP 3  
RDP O3P    O3P  O 0 1 N N N -31.603 -12.799 43.367 -2.130 1.673  0.312  O3P    RDP 4  
RDP "O1'"  O1*  O 0 1 N N N -29.307 -11.847 43.309 -1.201 -0.783 0.452  "O1'"  RDP 5  
RDP "C1'"  C1*  C 0 1 N N R -28.456 -12.372 42.284 -0.038 -0.388 -0.277 "C1'"  RDP 6  
RDP "C2'"  C2*  C 0 1 N N R -27.401 -11.602 41.482 0.962  -1.568 -0.379 "C2'"  RDP 7  
RDP "O2'"  O2*  O 0 1 N N N -26.544 -10.760 42.227 0.980  -2.334 0.827  "O2'"  RDP 8  
RDP "C3'"  C3*  C 0 1 N N S -28.156 -11.013 40.298 2.302  -0.806 -0.578 "C3'"  RDP 9  
RDP "O3'"  O3*  O 0 1 N N N -29.063 -9.957  40.605 3.401  -1.572 -0.082 "O3'"  RDP 10 
RDP "C4'"  C4*  C 0 1 N N R -29.031 -12.202 39.946 2.082  0.465  0.271  "C4'"  RDP 11 
RDP "O4'"  O4*  O 0 1 N N N -28.825 -13.045 41.077 0.670  0.642  0.432  "O4'"  RDP 12 
RDP "C5'"  C5*  C 0 1 N N N -28.736 -13.086 38.754 2.677  1.678  -0.448 "C5'"  RDP 13 
RDP "O5'"  O5*  O 0 1 N N N -29.466 -14.294 38.692 2.570  2.829  0.392  "O5'"  RDP 14 
RDP HOP2   2HOP H 0 0 N N N -31.099 -9.776  42.217 -4.488 0.229  0.271  HOP2   RDP 15 
RDP HOP3   3HOP H 0 0 N N N -31.757 -13.107 42.482 -2.064 1.711  1.276  HOP3   RDP 16 
RDP "H1'"  H1*  H 0 1 N N N -28.225 -12.933 43.201 -0.315 -0.040 -1.272 "H1'"  RDP 17 
RDP "H2'"  H2*  H 0 1 N N N -26.606 -12.263 41.107 0.737  -2.200 -1.239 "H2'"  RDP 18 
RDP "HO2'" *HO2 H 0 0 N N N -25.764 -10.571 41.718 0.088  -2.689 0.946  "HO2'" RDP 19 
RDP "H3'"  H3*  H 0 1 N N N -27.458 -10.595 39.557 2.450  -0.550 -1.627 "H3'"  RDP 20 
RDP "HO3'" *HO3 H 0 0 N N N -29.265 -9.972  41.533 3.426  -2.390 -0.597 "HO3'" RDP 21 
RDP "H4'"  H4*  H 0 1 N N N -30.015 -11.781 39.691 2.553  0.345  1.246  "H4'"  RDP 22 
RDP "H5'1" 1H5* H 0 0 N N N -27.678 -13.375 38.844 2.134  1.854  -1.376 "H5'1" RDP 23 
RDP "H5'2" 2H5* H 0 0 N N N -28.975 -12.509 37.848 3.727  1.488  -0.672 "H5'2" RDP 24 
RDP "HO5'" *HO5 H 0 0 N N N -29.630 -14.519 37.784 2.956  3.569  -0.097 "HO5'" RDP 25 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
RDP O1P   P      DOUB N N 1  
RDP P     O2P    SING N N 2  
RDP P     O3P    SING N N 3  
RDP P     "O1'"  SING N N 4  
RDP O2P   HOP2   SING N N 5  
RDP O3P   HOP3   SING N N 6  
RDP "O1'" "C1'"  SING N N 7  
RDP "C1'" "C2'"  SING N N 8  
RDP "C1'" "O4'"  SING N N 9  
RDP "C1'" "H1'"  SING N N 10 
RDP "C2'" "O2'"  SING N N 11 
RDP "C2'" "C3'"  SING N N 12 
RDP "C2'" "H2'"  SING N N 13 
RDP "O2'" "HO2'" SING N N 14 
RDP "C3'" "O3'"  SING N N 15 
RDP "C3'" "C4'"  SING N N 16 
RDP "C3'" "H3'"  SING N N 17 
RDP "O3'" "HO3'" SING N N 18 
RDP "C4'" "O4'"  SING N N 19 
RDP "C4'" "C5'"  SING N N 20 
RDP "C4'" "H4'"  SING N N 21 
RDP "C5'" "O5'"  SING N N 22 
RDP "C5'" "H5'1" SING N N 23 
RDP "C5'" "H5'2" SING N N 24 
RDP "O5'" "HO5'" SING N N 25 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
RDP SMILES           ACDLabs              10.04 "O=P(OC1OC(C(O)C1O)CO)(O)O"                                                                               
RDP InChI            InChI                1.02b "InChI=1/C5H11O8P/c6-1-2-3(7)4(8)5(12-2)13-14(9,10)11/h2-8H,1H2,(H2,9,10,11)/t2-,3-,4-,5-/m1/s1/f/h9-10H" 
RDP InChIKey         InChI                1.02b YXJDFQJKERBOBM-MGGMCEATDD                                                                                 
RDP SMILES_CANONICAL CACTVS               3.341 "OC[C@H]1O[C@H](O[P](O)(O)=O)[C@H](O)[C@@H]1O"                                                            
RDP SMILES           CACTVS               3.341 "OC[CH]1O[CH](O[P](O)(O)=O)[CH](O)[CH]1O"                                                                 
RDP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C([C@@H]1[C@H]([C@H]([C@H](O1)OP(=O)(O)O)O)O)O"                                                          
RDP SMILES           "OpenEye OEToolkits" 1.5.0 "C(C1C(C(C(O1)OP(=O)(O)O)O)O)O"                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
RDP "SYSTEMATIC NAME" ACDLabs              10.04 1-O-phosphono-alpha-D-ribofuranose                                                
RDP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl] dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
RDP "Create component" 2003-12-19 RCSB 
# 
