data_RTP
# 
_chem_comp.id                                    RTP 
_chem_comp.name                                  "RIBAVIRIN TRIPHOSPHATE" 
_chem_comp.type                                  "RNA LINKING" 
_chem_comp.pdbx_type                             ATOMN 
_chem_comp.formula                               "C8 H15 N4 O14 P3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2002-09-09 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        484.144 
_chem_comp.one_letter_code                       N 
_chem_comp.three_letter_code                     RTP 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1MN9 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
RTP PG     PG   P 0 1 N N N 70.020 29.191 2.189  6.341  1.148  0.141  PG     RTP 1  
RTP O1G    O1G  O 0 1 N N N 70.409 30.443 2.901  5.797  1.641  -1.144 O1G    RTP 2  
RTP O2G    O2G  O 0 1 N N N 70.177 27.903 2.924  7.228  2.304  0.827  O2G    RTP 3  
RTP O3G    O3G  O 0 1 N N N 70.685 29.321 0.861  7.260  -0.146 -0.126 O3G    RTP 4  
RTP O3B    O3B  O 0 1 N N N 68.437 29.314 1.886  5.126  0.751  1.121  O3B    RTP 5  
RTP PB     PB   P 0 1 N N R 67.311 29.181 0.737  4.074  -0.090 0.239  PB     RTP 6  
RTP O1B    O1B  O 0 1 N N N 67.584 27.980 -0.098 3.958  0.520  -1.104 O1B    RTP 7  
RTP O2B    O2B  O 0 1 N N N 65.983 29.325 1.375  4.585  -1.610 0.097  O2B    RTP 8  
RTP O3A    O3A  O 0 1 N N N 67.487 30.449 -0.215 2.635  -0.073 0.962  O3A    RTP 9  
RTP PA     PA   P 0 1 N N R 68.207 30.674 -1.621 1.560  -0.567 -0.130 PA     RTP 10 
RTP O1A    O1A  O 0 1 N N N 67.190 30.730 -2.704 2.088  -1.754 -0.840 O1A    RTP 11 
RTP O2A    O2A  O 0 1 N N N 69.352 29.735 -1.730 1.289  0.615  -1.189 O2A    RTP 12 
RTP "O5'"  O5*  O 0 1 N N N 68.785 32.135 -1.384 0.182  -0.952 0.608  "O5'"  RTP 13 
RTP "C5'"  C5*  C 0 1 N N N 69.785 32.353 -0.404 -0.685 -1.491 -0.391 "C5'"  RTP 14 
RTP "C4'"  C4*  C 0 1 N N R 69.334 33.411 0.564  -2.020 -1.879 0.249  "C4'"  RTP 15 
RTP "O4'"  O4*  O 0 1 N N N 69.362 34.711 -0.084 -2.718 -0.702 0.709  "O4'"  RTP 16 
RTP "C1'"  C1*  C 0 1 N N R 68.201 35.460 0.267  -4.102 -1.100 0.823  "C1'"  RTP 17 
RTP N1     N1   N 0 1 Y N N 67.387 35.609 -0.934 -4.975 0.077  0.801  N1     RTP 18 
RTP N2     N2   N 0 1 Y N N 66.752 36.747 -1.340 -5.093 0.908  -0.176 N2     RTP 19 
RTP N3     N3   N 0 1 N N N 65.275 38.586 -2.723 -7.288 3.861  -0.204 N3     RTP 20 
RTP C6     C6   C 0 1 N N N 65.313 37.310 -3.290 -6.381 2.981  -0.673 C6     RTP 21 
RTP O3     O3   O 0 1 N N N 64.696 37.078 -4.335 -5.909 3.129  -1.783 O3     RTP 22 
RTP C3     C3   C 0 1 Y N N 66.101 36.421 -2.524 -5.961 1.836  0.163  C3     RTP 23 
RTP N4     N4   N 0 1 Y N N 66.346 35.087 -2.837 -6.403 1.556  1.402  N4     RTP 24 
RTP C5     C5   C 0 1 Y N N 67.106 34.651 -1.873 -5.792 0.468  1.796  C5     RTP 25 
RTP "C2'"  C2*  C 0 1 N N R 67.472 34.699 1.377  -4.363 -1.986 -0.415 "C2'"  RTP 26 
RTP "O2'"  O2*  O 0 1 N N N 67.955 35.138 2.635  -5.230 -3.074 -0.087 "O2'"  RTP 27 
RTP "C3'"  C3*  C 0 1 N N S 67.903 33.287 1.044  -2.960 -2.509 -0.803 "C3'"  RTP 28 
RTP "O3'"  O3*  O 0 1 N N N 67.799 32.412 2.159  -2.917 -3.935 -0.723 "O3'"  RTP 29 
RTP HOG2   2HOG H 0 0 N N N 69.929 27.106 2.471  7.942  2.512  0.210  HOG2   RTP 30 
RTP HOG3   3HOG H 0 0 N N N 70.437 28.524 0.408  7.594  -0.435 0.735  HOG3   RTP 31 
RTP HOB2   2HOB H 0 0 N N N 65.320 29.247 0.699  4.647  -1.969 0.993  HOB2   RTP 32 
RTP HOA2   2HOA H 0 0 N N N 69.781 29.869 -2.567 0.947  1.367  -0.687 HOA2   RTP 33 
RTP "H5'1" 1H5* H 0 0 N N N 70.772 32.598 -0.861 -0.225 -2.374 -0.834 "H5'1" RTP 34 
RTP "H5'2" 2H5* H 0 0 N N N 70.076 31.409 0.114  -0.857 -0.743 -1.165 "H5'2" RTP 35 
RTP "H4'"  H4*  H 0 1 N N N 70.031 33.289 1.426  -1.857 -2.571 1.075  "H4'"  RTP 36 
RTP "H1'"  H1*  H 0 1 N N N 68.445 36.479 0.648  -4.259 -1.671 1.738  "H1'"  RTP 37 
RTP HN31   1HN3 H 0 0 N N N 65.784 38.778 -1.860 -7.564 4.612  -0.752 HN31   RTP 38 
RTP HN32   2HN3 H 0 0 N N N 64.706 39.228 -3.276 -7.668 3.740  0.680  HN32   RTP 39 
RTP H5     H5   H 0 1 N N N 67.464 33.608 -1.854 -5.921 -0.027 2.747  H5     RTP 40 
RTP "H2'"  H2*  H 0 1 N N N 66.366 34.826 1.435  -4.787 -1.393 -1.225 "H2'"  RTP 41 
RTP "HO2'" *HO2 H 0 0 N N N 67.503 34.666 3.324  -6.086 -2.689 0.146  "HO2'" RTP 42 
RTP "H3'"  H3*  H 0 1 N N N 67.241 32.837 0.268  -2.690 -2.175 -1.805 "H3'"  RTP 43 
RTP "HO3'" *HO3 H 0 0 N N N 66.901 32.334 2.460  -3.520 -4.272 -1.400 "HO3'" RTP 44 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
RTP PG    O1G    DOUB N N 1  
RTP PG    O2G    SING N N 2  
RTP PG    O3G    SING N N 3  
RTP PG    O3B    SING N N 4  
RTP O2G   HOG2   SING N N 5  
RTP O3G   HOG3   SING N N 6  
RTP O3B   PB     SING N N 7  
RTP PB    O1B    DOUB N N 8  
RTP PB    O2B    SING N N 9  
RTP PB    O3A    SING N N 10 
RTP O2B   HOB2   SING N N 11 
RTP O3A   PA     SING N N 12 
RTP PA    O1A    DOUB N N 13 
RTP PA    O2A    SING N N 14 
RTP PA    "O5'"  SING N N 15 
RTP O2A   HOA2   SING N N 16 
RTP "O5'" "C5'"  SING N N 17 
RTP "C5'" "C4'"  SING N N 18 
RTP "C5'" "H5'1" SING N N 19 
RTP "C5'" "H5'2" SING N N 20 
RTP "C4'" "O4'"  SING N N 21 
RTP "C4'" "C3'"  SING N N 22 
RTP "C4'" "H4'"  SING N N 23 
RTP "O4'" "C1'"  SING N N 24 
RTP "C1'" N1     SING N N 25 
RTP "C1'" "C2'"  SING N N 26 
RTP "C1'" "H1'"  SING N N 27 
RTP N1    N2     SING Y N 28 
RTP N1    C5     SING Y N 29 
RTP N2    C3     DOUB Y N 30 
RTP N3    C6     SING N N 31 
RTP N3    HN31   SING N N 32 
RTP N3    HN32   SING N N 33 
RTP C6    O3     DOUB N N 34 
RTP C6    C3     SING N N 35 
RTP C3    N4     SING Y N 36 
RTP N4    C5     DOUB Y N 37 
RTP C5    H5     SING N N 38 
RTP "C2'" "O2'"  SING N N 39 
RTP "C2'" "C3'"  SING N N 40 
RTP "C2'" "H2'"  SING N N 41 
RTP "O2'" "HO2'" SING N N 42 
RTP "C3'" "O3'"  SING N N 43 
RTP "C3'" "H3'"  SING N N 44 
RTP "O3'" "HO3'" SING N N 45 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
RTP SMILES           ACDLabs              10.04 "O=P(O)(O)OP(=O)(O)OP(=O)(O)OCC2OC(n1nc(nc1)C(=O)N)C(O)C2O"                                                                                                                              
RTP SMILES_CANONICAL CACTVS               3.341 "NC(=O)c1ncn(n1)[C@@H]2O[C@H](CO[P@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]2O"                                                                                                   
RTP SMILES           CACTVS               3.341 "NC(=O)c1ncn(n1)[CH]2O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]2O"                                                                                                            
RTP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1nc(nn1[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)O)O)C(=O)N"                                                                                                   
RTP SMILES           "OpenEye OEToolkits" 1.5.0 "c1nc(nn1C2C(C(C(O2)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)C(=O)N"                                                                                                                            
RTP InChI            InChI                1.03  "InChI=1S/C8H15N4O14P3/c9-6(15)7-10-2-12(11-7)8-5(14)4(13)3(24-8)1-23-28(19,20)26-29(21,22)25-27(16,17)18/h2-5,8,13-14H,1H2,(H2,9,15)(H,19,20)(H,21,22)(H2,16,17,18)/t3-,4-,5-,8-/m1/s1" 
RTP InChIKey         InChI                1.03  MMJOCKKLRMRSEQ-AFCXAGJDSA-N                                                                                                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
RTP "SYSTEMATIC NAME" ACDLabs              10.04 "1-{5-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-ribofuranosyl}-1H-1,2,4-triazole-3-carboxamide"            
RTP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[[(2R,3S,4R,5R)-5-(3-aminocarbonyl-1,2,4-triazol-1-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl] phosphono hydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
RTP "Create component"  2002-09-09 RCSB 
RTP "Modify descriptor" 2011-06-04 RCSB 
# 
