data_SCP
# 
_chem_comp.id                                    SCP 
_chem_comp.name                                  "[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C11 H16 N3 O7 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         PYRIDOXYL-N,O-CYCLOSERYLAMIDE-5-MONOPHOSPHATE 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     1999-07-08 
_chem_comp.pdbx_modified_date                    2008-10-14 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   OBS 
_chem_comp.pdbx_replaced_by                      DCS 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        333.234 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     SCP 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2DAA 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
SCP N1   N1   N 0 1 Y N N 43.195 27.292 33.382 3.732  0.488  0.889  N1   SCP 1  
SCP C2   C2   C 0 1 Y N N 43.322 27.921 32.194 3.946  0.195  -0.378 C2   SCP 2  
SCP C2A  C2A  C 0 1 N N N 42.158 28.775 31.769 5.328  0.351  -0.957 C2A  SCP 3  
SCP C3   C3   C 0 1 Y N N 44.464 27.798 31.394 2.910  -0.249 -1.186 C3   SCP 4  
SCP O3   O3   O 0 1 N N N 44.467 28.414 30.154 3.135  -0.549 -2.492 O3   SCP 5  
SCP C4   C4   C 0 1 Y N N 45.569 27.038 31.866 1.639  -0.393 -0.637 C4   SCP 6  
SCP C4A  C4A  C 0 1 N N N 46.826 26.808 31.045 0.486  -0.880 -1.477 C4A  SCP 7  
SCP C5   C5   C 0 1 Y N N 45.456 26.460 33.145 1.459  -0.074 0.698  C5   SCP 8  
SCP C6   C6   C 0 1 Y N N 44.248 26.578 33.835 2.539  0.368  1.438  C6   SCP 9  
SCP C5A  C5A  C 0 1 N N N 46.598 25.703 33.771 0.100  -0.208 1.337  C5A  SCP 10 
SCP O4P  O4P  O 0 1 N N N 46.641 24.407 33.192 0.180  0.179  2.710  O4P  SCP 11 
SCP P    P    P 0 1 N N N 47.977 23.631 33.237 -1.297 0.013  3.326  P    SCP 12 
SCP O1P  O1P  O 0 1 N N N 47.748 22.275 32.698 -1.727 -1.397 3.203  O1P  SCP 13 
SCP O2P  O2P  O 0 1 N N N 48.978 24.344 32.410 -1.281 0.435  4.880  O2P  SCP 14 
SCP O3P  O3P  O 0 1 N N N 48.445 23.541 34.655 -2.323 0.958  2.524  O3P  SCP 15 
SCP N    N    N 0 1 N N N 46.840 27.521 29.806 -0.182 0.268  -2.102 N    SCP 16 
SCP CA   CA   C 0 1 N N R 47.915 27.736 29.062 -1.289 -0.271 -2.902 CA   SCP 17 
SCP C    C    C 0 1 N N N 47.949 28.490 27.807 -2.579 -0.273 -2.103 C    SCP 18 
SCP O    O    O 0 1 N N N 46.951 28.774 27.157 -2.718 -0.658 -0.961 O    SCP 19 
SCP ND   ND   N 0 1 N N N 49.214 28.824 27.574 -3.545 0.239  -2.896 ND   SCP 20 
SCP OG   OG   O 0 1 N N N 50.115 28.112 28.394 -3.050 0.564  -4.180 OG   SCP 21 
SCP CB   CB   C 0 1 N N N 49.360 27.312 29.299 -1.616 0.664  -4.088 CB   SCP 22 
SCP H2A1 1H2A H 0 0 N N N 42.262 29.294 30.788 5.880  -0.580 -0.835 H2A1 SCP 23 
SCP H2A2 2H2A H 0 0 N N N 41.222 28.169 31.777 5.253  0.593  -2.017 H2A2 SCP 24 
SCP H2A3 3H2A H 0 0 N N N 41.923 29.518 32.566 5.851  1.154  -0.437 H2A3 SCP 25 
SCP HO3  HO3  H 0 1 N N N 45.242 28.330 29.611 2.980  0.260  -2.996 HO3  SCP 26 
SCP H4A1 1H4A H 0 0 N N N 47.736 27.042 31.644 0.859  -1.549 -2.253 H4A1 SCP 27 
SCP H4A2 2H4A H 0 0 N N N 46.991 25.718 30.874 -0.222 -1.414 -0.846 H4A2 SCP 28 
SCP H6   H6   H 0 1 N N N 44.116 26.071 34.806 2.405  0.618  2.480  H6   SCP 29 
SCP H5A1 1H5A H 0 0 N N N 47.569 26.243 33.687 -0.609 0.434  0.818  H5A1 SCP 30 
SCP H5A2 2H5A H 0 0 N N N 46.536 25.675 34.884 -0.231 -1.244 1.271  H5A2 SCP 31 
SCP HOP2 2HOP H 0 0 N N N 49.799 23.867 32.437 -2.183 0.321  5.210  HOP2 SCP 32 
SCP HOP3 3HOP H 0 0 N N N 49.266 23.064 34.682 -2.008 1.866  2.629  HOP3 SCP 33 
SCP HN   HN   H 0 1 N N N 46.423 28.433 29.988 -0.598 0.803  -1.355 HN   SCP 34 
SCP HA   HA   H 0 1 N N N 47.123 27.367 29.755 -1.054 -1.275 -3.256 HA   SCP 35 
SCP HND  HND  H 0 1 N N N 49.457 29.522 26.871 -4.466 0.366  -2.619 HND  SCP 36 
SCP HB1  1HB  H 0 1 N N N 49.690 27.389 30.361 -1.312 1.688  -3.868 HB1  SCP 37 
SCP HB2  2HB  H 0 1 N N N 49.536 26.216 29.195 -1.144 0.308  -5.004 HB2  SCP 38 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
SCP N1  C2   DOUB Y N 1  
SCP N1  C6   SING Y N 2  
SCP C2  C2A  SING N N 3  
SCP C2  C3   SING Y N 4  
SCP C2A H2A1 SING N N 5  
SCP C2A H2A2 SING N N 6  
SCP C2A H2A3 SING N N 7  
SCP C3  O3   SING N N 8  
SCP C3  C4   DOUB Y N 9  
SCP O3  HO3  SING N N 10 
SCP C4  C4A  SING N N 11 
SCP C4  C5   SING Y N 12 
SCP C4A N    SING N N 13 
SCP C4A H4A1 SING N N 14 
SCP C4A H4A2 SING N N 15 
SCP C5  C6   DOUB Y N 16 
SCP C5  C5A  SING N N 17 
SCP C6  H6   SING N N 18 
SCP C5A O4P  SING N N 19 
SCP C5A H5A1 SING N N 20 
SCP C5A H5A2 SING N N 21 
SCP O4P P    SING N N 22 
SCP P   O1P  DOUB N N 23 
SCP P   O2P  SING N N 24 
SCP P   O3P  SING N N 25 
SCP O2P HOP2 SING N N 26 
SCP O3P HOP3 SING N N 27 
SCP N   CA   SING N N 28 
SCP N   HN   SING N N 29 
SCP CA  C    SING N N 30 
SCP CA  CB   SING N N 31 
SCP CA  HA   SING N N 32 
SCP C   O    DOUB N N 33 
SCP C   ND   SING N N 34 
SCP ND  OG   SING N N 35 
SCP ND  HND  SING N N 36 
SCP OG  CB   SING N N 37 
SCP CB  HB1  SING N N 38 
SCP CB  HB2  SING N N 39 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
SCP SMILES           ACDLabs              10.04 "O=C2NOCC2NCc1c(cnc(c1O)C)COP(=O)(O)O"                                                                                                                  
SCP InChI            InChI                1.02b "InChI=1/C11H16N3O7P/c1-6-10(15)8(3-13-9-5-20-14-11(9)16)7(2-12-6)4-21-22(17,18)19/h2,9,13,15H,3-5H2,1H3,(H,14,16)(H2,17,18,19)/t9-/m1/s1/f/h14,17-18H" 
SCP InChIKey         InChI                1.02b NNRZSZJOQKAGTO-LUCJAKDJDF                                                                                                                               
SCP SMILES_CANONICAL CACTVS               3.341 "Cc1ncc(CO[P](O)(O)=O)c(CN[C@@H]2CONC2=O)c1O"                                                                                                           
SCP SMILES           CACTVS               3.341 "Cc1ncc(CO[P](O)(O)=O)c(CN[CH]2CONC2=O)c1O"                                                                                                             
SCP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "Cc1c(c(c(cn1)COP(=O)(O)O)CNC2CONC2=O)O"                                                                                                                
SCP SMILES           "OpenEye OEToolkits" 1.5.0 "Cc1c(c(c(cn1)COP(=O)(O)O)CNC2CONC2=O)O"                                                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
SCP "SYSTEMATIC NAME" ACDLabs              10.04 "[5-hydroxy-6-methyl-4-({[(4R)-3-oxoisoxazolidin-4-yl]amino}methyl)pyridin-3-yl]methyl dihydrogen phosphate" 
SCP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[5-hydroxy-6-methyl-4-[[(3-oxo-1,2-oxazolidin-4-yl)amino]methyl]pyridin-3-yl]methyl dihydrogen phosphate"   
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
SCP "Create component" 1999-07-08 RCSB 
# 
