data_TPP
# 
_chem_comp.id                                    TPP 
_chem_comp.name                                  "THIAMINE DIPHOSPHATE" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H19 N4 O7 P2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     1999-07-08 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        425.314 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     TPP 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1BFD 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
TPP "N1'"  "N1'"  N 0 1 Y N N 92.370 46.063 160.813 -6.096 -2.273 -0.022 "N1'"  TPP 1  
TPP "C2'"  "C2'"  C 0 1 Y N N 91.754 44.954 160.390 -7.012 -1.612 0.656  "C2'"  TPP 2  
TPP CM2    CM2    C 0 1 N N N 90.251 45.078 160.110 -8.035 -2.382 1.451  CM2    TPP 3  
TPP "N3'"  "N3'"  N 0 1 Y N N 92.378 43.795 160.173 -7.058 -0.295 0.660  "N3'"  TPP 4  
TPP "C4'"  "C4'"  C 0 1 Y N N 93.717 43.798 160.367 -6.172 0.417  -0.030 "C4'"  TPP 5  
TPP "N4'"  "N4'"  N 0 1 N N N 94.365 42.682 159.927 -6.223 1.801  -0.024 "N4'"  TPP 6  
TPP "C5'"  "C5'"  C 0 1 Y N N 94.445 44.916 160.823 -5.188 -0.254 -0.760 "C5'"  TPP 7  
TPP "C6'"  "C6'"  C 0 1 Y N N 93.682 46.063 161.043 -5.178 -1.634 -0.733 "C6'"  TPP 8  
TPP "C7'"  "C7'"  C 0 1 N N N 95.959 44.874 160.992 -4.162 0.511  -1.557 "C7'"  TPP 9  
TPP N3     N3     N 1 1 Y N N 96.446 43.936 162.026 -3.086 0.956  -0.668 N3     TPP 10 
TPP C2     C2     C 0 1 Y N N 96.862 42.647 161.736 -3.122 2.112  -0.095 C2     TPP 11 
TPP S1     S1     S 0 1 Y N N 97.313 41.796 163.217 -1.730 2.334  0.873  S1     TPP 12 
TPP C5     C5     C 0 1 Y N N 96.929 43.209 164.160 -1.143 0.738  0.410  C5     TPP 13 
TPP C4     C4     C 0 1 Y N N 96.473 44.283 163.455 -2.043 0.192  -0.414 C4     TPP 14 
TPP CM4    CM4    C 0 1 N N N 95.893 45.597 163.999 -1.875 -1.182 -1.009 CM4    TPP 15 
TPP C6     C6     C 0 1 N N N 97.245 43.057 165.632 0.142  0.099  0.869  C6     TPP 16 
TPP C7     C7     C 0 1 N N N 96.139 42.334 166.434 1.267  0.463  -0.102 C7     TPP 17 
TPP O7     O7     O 0 1 N N N 96.442 42.565 167.810 2.486  -0.144 0.332  O7     TPP 18 
TPP PA     PA     P 0 1 N N S 96.055 41.545 168.883 3.880  0.027  -0.455 PA     TPP 19 
TPP O1A    O1A    O 0 1 N N N 94.662 41.016 168.615 4.181  1.467  -0.617 O1A    TPP 20 
TPP O2A    O2A    O 0 1 N N N 96.102 42.250 170.209 3.765  -0.663 -1.905 O2A    TPP 21 
TPP O3A    O3A    O 0 1 N N N 97.016 40.352 168.895 5.060  -0.677 0.383  O3A    TPP 22 
TPP PB     PB     P 0 1 N N N 98.579 40.181 168.929 6.664  -0.536 0.392  PB     TPP 23 
TPP O1B    O1B    O 0 1 N N N 99.045 41.074 170.081 7.154  -0.393 -0.997 O1B    TPP 24 
TPP O2B    O2B    O 0 1 N N N 98.684 38.699 169.253 7.083  0.763  1.246  O2B    TPP 25 
TPP O3B    O3B    O 0 1 N N N 99.213 40.561 167.641 7.314  -1.849 1.059  O3B    TPP 26 
TPP HM21   HM21   H 0 0 N N N 89.701 45.108 161.062 -7.660 -2.548 2.461  HM21   TPP 27 
TPP HM22   HM22   H 0 0 N N N 90.058 46.003 159.547 -8.964 -1.814 1.496  HM22   TPP 28 
TPP HM23   HM23   H 0 0 N N N 89.916 44.212 159.520 -8.220 -3.343 0.970  HM23   TPP 29 
TPP HN41   HN41   H 0 0 N N N 94.524 42.755 158.942 -6.909 2.259  0.486  HN41   TPP 30 
TPP HN42   HN42   H 0 0 N N N 95.242 42.597 160.400 -5.572 2.313  -0.530 HN42   TPP 31 
TPP "H6'"  "H6'"  H 0 1 N N N 94.161 46.961 161.404 -4.432 -2.186 -1.285 "H6'"  TPP 32 
TPP "H7'1" "H7'1" H 0 0 N N N 96.394 44.566 160.030 -3.748 -0.136 -2.331 "H7'1" TPP 33 
TPP "H7'2" "H7'2" H 0 0 N N N 96.264 45.880 161.317 -4.633 1.377  -2.020 "H7'2" TPP 34 
TPP H2     H2     H 0 1 N N N 96.905 42.222 160.744 -3.916 2.835  -0.210 H2     TPP 35 
TPP HM41   HM41   H 0 0 N N N 95.754 45.515 165.087 -1.256 -1.117 -1.904 HM41   TPP 36 
TPP HM42   HM42   H 0 0 N N N 96.586 46.422 163.779 -1.394 -1.836 -0.282 HM42   TPP 37 
TPP HM43   HM43   H 0 0 N N N 94.923 45.795 163.520 -2.852 -1.586 -1.272 HM43   TPP 38 
TPP H61    H61    H 0 1 N N N 98.171 42.471 165.724 0.392  0.460  1.866  H61    TPP 39 
TPP H62    H62    H 0 1 N N N 97.338 44.070 166.049 0.020  -0.984 0.895  H62    TPP 40 
TPP H71    H71    H 0 1 N N N 95.148 42.738 166.181 1.017  0.101  -1.100 H71    TPP 41 
TPP H72    H72    H 0 1 N N N 96.110 41.259 166.202 1.389  1.545  -0.128 H72    TPP 42 
TPP HOA2   HOA2   H 0 0 N N N 96.112 41.608 170.909 3.568  -1.609 -1.876 HOA2   TPP 43 
TPP HOB2   HOB2   H 0 0 N N N 98.706 38.199 168.446 6.793  0.738  2.168  HOB2   TPP 44 
TPP HOB3   HOB3   H 0 0 N N N 98.545 40.642 166.970 8.280  -1.833 1.098  HOB3   TPP 45 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
TPP "N1'" "C2'"  DOUB Y N 1  
TPP "N1'" "C6'"  SING Y N 2  
TPP "C2'" CM2    SING N N 3  
TPP "C2'" "N3'"  SING Y N 4  
TPP CM2   HM21   SING N N 5  
TPP CM2   HM22   SING N N 6  
TPP CM2   HM23   SING N N 7  
TPP "N3'" "C4'"  DOUB Y N 8  
TPP "C4'" "N4'"  SING N N 9  
TPP "C4'" "C5'"  SING Y N 10 
TPP "N4'" HN41   SING N N 11 
TPP "N4'" HN42   SING N N 12 
TPP "C5'" "C6'"  DOUB Y N 13 
TPP "C5'" "C7'"  SING N N 14 
TPP "C6'" "H6'"  SING N N 15 
TPP "C7'" N3     SING N N 16 
TPP "C7'" "H7'1" SING N N 17 
TPP "C7'" "H7'2" SING N N 18 
TPP N3    C2     DOUB Y N 19 
TPP N3    C4     SING Y N 20 
TPP C2    S1     SING Y N 21 
TPP C2    H2     SING N N 22 
TPP S1    C5     SING Y N 23 
TPP C5    C4     DOUB Y N 24 
TPP C5    C6     SING N N 25 
TPP C4    CM4    SING N N 26 
TPP CM4   HM41   SING N N 27 
TPP CM4   HM42   SING N N 28 
TPP CM4   HM43   SING N N 29 
TPP C6    C7     SING N N 30 
TPP C6    H61    SING N N 31 
TPP C6    H62    SING N N 32 
TPP C7    O7     SING N N 33 
TPP C7    H71    SING N N 34 
TPP C7    H72    SING N N 35 
TPP O7    PA     SING N N 36 
TPP PA    O1A    DOUB N N 37 
TPP PA    O2A    SING N N 38 
TPP PA    O3A    SING N N 39 
TPP O2A   HOA2   SING N N 40 
TPP O3A   PB     SING N N 41 
TPP PB    O1B    DOUB N N 42 
TPP PB    O2B    SING N N 43 
TPP PB    O3B    SING N N 44 
TPP O2B   HOB2   SING N N 45 
TPP O3B   HOB3   SING N N 46 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
TPP SMILES           ACDLabs              10.04 "O=P(O)(O)OP(=O)(O)OCCc1sc[n+](c1C)Cc2c(nc(nc2)C)N"                                                                                                       
TPP SMILES_CANONICAL CACTVS               3.341 "Cc1ncc(C[n+]2csc(CCO[P@@](O)(=O)O[P](O)(O)=O)c2C)c(N)n1"                                                                                                 
TPP SMILES           CACTVS               3.341 "Cc1ncc(C[n+]2csc(CCO[P](O)(=O)O[P](O)(O)=O)c2C)c(N)n1"                                                                                                   
TPP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "Cc1c(sc[n+]1Cc2cnc(nc2N)C)CCO[P@](=O)(O)OP(=O)(O)O"                                                                                                      
TPP SMILES           "OpenEye OEToolkits" 1.5.0 "Cc1c(sc[n+]1Cc2cnc(nc2N)C)CCOP(=O)(O)OP(=O)(O)O"                                                                                                         
TPP InChI            InChI                1.03  "InChI=1S/C12H18N4O7P2S/c1-8-11(3-4-22-25(20,21)23-24(17,18)19)26-7-16(8)6-10-5-14-9(2)15-12(10)13/h5,7H,3-4,6H2,1-2H3,(H4-,13,14,15,17,18,19,20,21)/p+1" 
TPP InChIKey         InChI                1.03  AYEKOFBPNLCAJY-UHFFFAOYSA-O                                                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
TPP "SYSTEMATIC NAME" ACDLabs              10.04 "3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium" 
TPP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-[3-[(4-amino-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-1,3-thiazol-3-ium-5-yl]ethyl phosphono hydrogen phosphate"           
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
TPP "Create component"  1999-07-08 EBI  
TPP "Modify descriptor" 2011-06-04 RCSB 
# 
