data_UAP
#

_chem_comp.id                                   UAP
_chem_comp.name                                 "4-deoxy-2-O-sulfo-alpha-L-threo-hex-4-enopyranuronic acid"
_chem_comp.type                                 "L-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H8 O9 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;4-deoxy-2-O-sulfo-alpha-L-threo-hex-4-enuronic acid; 4-deoxy-2-O-sulfo-L-threo-hex-4-enuronic acid;
4-deoxy-2-O-sulfo-threo-hex-4-enuronic acid
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-07-08
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       256.187
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    UAP
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1BFB
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  UAP  "4-deoxy-2-O-sulfo-alpha-L-threo-hex-4-enuronic acid"  PDB  ?  
2  UAP  "4-deoxy-2-O-sulfo-L-threo-hex-4-enuronic acid"        PDB  ?  
3  UAP  "4-deoxy-2-O-sulfo-threo-hex-4-enuronic acid"          PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
UAP  S     S     S  0  1  N  N  N   9.398  -3.615  56.490  -2.797   0.158  -0.147  S     UAP   1  
UAP  C1    C1    C  0  1  N  N  R   8.236  -1.815  53.345   0.296   0.974   0.701  C1    UAP   2  
UAP  O1    O1    O  0  1  N  Y  N   6.953  -1.492  52.853  -0.499   2.115   0.372  O1    UAP   3  
UAP  C2    C2    C  0  1  N  N  R   7.985  -2.915  54.333  -0.387  -0.299   0.183  C2    UAP   4  
UAP  O2    O2    O  0  1  N  N  N   9.261  -3.255  54.797  -1.697  -0.405   0.743  O2    UAP   5  
UAP  C3    C3    C  0  1  N  N  S   7.390  -4.151  53.652   0.457  -1.505   0.612  C3    UAP   6  
UAP  O3    O3    O  0  1  N  N  N   6.010  -4.043  53.417   0.022  -2.667  -0.097  O3    UAP   7  
UAP  C4    C4    C  0  1  N  N  N   8.037  -4.426  52.408   1.905  -1.239   0.300  C4    UAP   8  
UAP  C5    C5    C  0  1  N  N  N   8.850  -3.551  51.831   2.366  -0.020   0.064  C5    UAP   9  
UAP  O5    O5    O  0  1  N  N  N   9.111  -2.319  52.330   1.578   1.083   0.076  O5    UAP  10  
UAP  C6    C6    C  0  1  N  N  N   9.498  -3.984  50.768   3.801   0.145  -0.224  C6    UAP  11  
UAP  O1S   O1S   O  0  1  N  N  N   9.063  -2.438  57.214  -3.022  -0.842  -1.272  O1S   UAP  12  
UAP  O2S   O2S   O  0  1  N  N  N  10.761  -4.020  56.741  -3.984   0.157   0.634  O2S   UAP  13  
UAP  O3S   O3S   O  0  1  N  N  N   8.437  -4.626  56.834  -2.265   1.329  -0.751  O3S   UAP  14  
UAP  O6B   O61   O  0  1  N  N  N   9.258  -5.132  50.386   4.303   1.372  -0.468  O6B   UAP  15  
UAP  O6A   O62   O  0  1  N  N  N  10.352  -3.267  50.239   4.533  -0.825  -0.241  O6A   UAP  16  
UAP  H1    H1    H  0  1  N  N  N   8.690  -0.954  53.857   0.419   0.911   1.782  H1    UAP  17  
UAP  HO1   HO1   H  0  1  N  Y  N   6.414  -1.164  53.563  -0.125   2.955   0.671  HO1   UAP  18  
UAP  H2    H2    H  0  1  N  N  N   7.324  -2.569  55.142  -0.453  -0.264  -0.904  H2    UAP  19  
UAP  H3    H3    H  0  1  N  N  N   7.564  -5.003  54.326   0.340  -1.667   1.683  H3    UAP  20  
UAP  HO3   HO3   H  0  1  N  N  N   5.697  -4.835  52.995   0.513  -3.470   0.125  HO3   UAP  21  
UAP  H4    H4    H  0  1  N  N  N   7.859  -5.374  51.923   2.592  -2.072   0.268  H4    UAP  22  
UAP  HO1S  HO1S  H  0  0  N  N  N   8.293  -2.601  57.745  -3.708  -0.579  -1.901  HO1S  UAP  23  
UAP  HO6B  HO61  H  0  0  N  N  N   9.821  -5.346  49.652   5.251   1.430  -0.652  HO6B  UAP  24  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
UAP  O2   S     SING  N  N   1  
UAP  S    O2S   DOUB  N  N   2  
UAP  S    O3S   DOUB  N  N   3  
UAP  S    O1S   SING  N  N   4  
UAP  O5   C1    SING  N  N   5  
UAP  O1   C1    SING  N  N   6  
UAP  C1   C2    SING  N  N   7  
UAP  C1   H1    SING  N  N   8  
UAP  O1   HO1   SING  N  N   9  
UAP  C3   C2    SING  N  N  10  
UAP  C2   O2    SING  N  N  11  
UAP  C2   H2    SING  N  N  12  
UAP  C4   C3    SING  N  N  13  
UAP  O3   C3    SING  N  N  14  
UAP  C3   H3    SING  N  N  15  
UAP  O3   HO3   SING  N  N  16  
UAP  C5   C4    DOUB  N  N  17  
UAP  C4   H4    SING  N  N  18  
UAP  C6   C5    SING  N  N  19  
UAP  C5   O5    SING  N  N  20  
UAP  O6A  C6    DOUB  N  N  21  
UAP  O6B  C6    SING  N  N  22  
UAP  O1S  HO1S  SING  N  N  23  
UAP  O6B  HO6B  SING  N  N  24  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
UAP  SMILES            ACDLabs               12.01  "O=C(O)C=1OC(O)C(OS(=O)(=O)O)C(O)C=1"  
UAP  InChI             InChI                 1.03   "InChI=1S/C6H8O9S/c7-2-1-3(5(8)9)14-6(10)4(2)15-16(11,12)13/h1-2,4,6-7,10H,(H,8,9)(H,11,12,13)/t2-,4+,6+/m0/s1"  
UAP  InChIKey          InChI                 1.03   VJIMUKBSNUBECH-YKKSOZKNSA-N  
UAP  SMILES_CANONICAL  CACTVS                3.370  "O[C@@H]1OC(=C[C@H](O)[C@H]1O[S](O)(=O)=O)C(O)=O"  
UAP  SMILES            CACTVS                3.370  "O[CH]1OC(=C[CH](O)[CH]1O[S](O)(=O)=O)C(O)=O"  
UAP  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "C1=C(O[C@H]([C@@H]([C@H]1O)OS(=O)(=O)O)O)C(=O)O"  
UAP  SMILES            "OpenEye OEToolkits"  1.7.6  "C1=C(OC(C(C1O)OS(=O)(=O)O)O)C(=O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
UAP  "SYSTEMATIC NAME"            ACDLabs               12.01  "4-deoxy-2-O-sulfo-alpha-L-threo-hex-4-enopyranuronic acid"  
UAP  "SYSTEMATIC NAME"            "OpenEye OEToolkits"  1.7.6  "(2R,3R,4S)-2,4-bis(oxidanyl)-3-sulfooxy-3,4-dihydro-2H-pyran-6-carboxylic acid"  
UAP  "IUPAC CARBOHYDRATE SYMBOL"  PDB-CARE              1.0    b-D-4-deoxy-GlcpA2SO3  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
UAP  "CARBOHYDRATE ISOMER"                  L             PDB  ?  
UAP  "CARBOHYDRATE RING"                    dihydropyran  PDB  ?  
UAP  "CARBOHYDRATE ANOMER"                  alpha         PDB  ?  
UAP  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  ketose        PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
UAP  "Create component"          1999-07-08  RCSB  
UAP  "Modify descriptor"         2011-06-04  RCSB  
UAP  "Other modification"        2012-12-21  RCSB  
UAP  "Other modification"        2020-07-03  RCSB  
UAP  "Modify synonyms"           2020-07-17  RCSB  
UAP  "Modify internal type"      2020-07-17  RCSB  
UAP  "Modify linking type"       2020-07-17  RCSB  
UAP  "Modify atom id"            2020-07-17  RCSB  
UAP  "Modify component atom id"  2020-07-17  RCSB  
##
