data_XFP
#

_chem_comp.id                                   XFP
_chem_comp.name                                 "3-[(2~{S},3~{R})-2-carboxypiperidin-3-yl]propyl-$l^{3}-oxidanyl-bis(oxidanyl)boranuide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C9 H19 B N O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   -1
_chem_comp.pdbx_initial_date                    2020-12-16
_chem_comp.pdbx_modified_date                   2021-09-24
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       232.062
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    XFP
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7KLK
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
XFP  O3   O1   O   0  1  N  N  N  18.140  7.638  24.275   2.977  -2.409   0.959  O3   XFP   1  
XFP  C8   C1   C   0  1  N  N  N  17.000  8.024  24.065   2.760  -1.513  -0.016  C8   XFP   2  
XFP  O4   O2   O   0  1  N  N  N  16.685  9.128  23.415   2.663  -1.879  -1.163  O4   XFP   3  
XFP  C    C2   C   0  1  N  N  S  15.767  7.210  24.582   2.639  -0.048   0.320  C    XFP   4  
XFP  C1   C3   C   0  1  N  N  R  15.797  5.714  24.211   1.230   0.239   0.845  C1   XFP   5  
XFP  C2   C4   C   0  1  N  N  N  14.589  5.041  24.859   1.105   1.731   1.165  C2   XFP   6  
XFP  C3   C5   C   0  1  N  N  N  13.274  5.658  24.391   1.415   2.544  -0.095  C3   XFP   7  
XFP  C4   C6   C   0  1  N  N  N  13.230  7.136  24.693   2.818   2.190  -0.592  C4   XFP   8  
XFP  N    N1   N   0  1  N  N  N  14.447  7.819  24.146   2.886   0.752  -0.886  N    XFP   9  
XFP  C5   C7   C   0  1  N  N  N  16.069  5.562  22.710   0.200  -0.142  -0.221  C5   XFP  10  
XFP  C6   C8   C   0  1  N  N  N  15.848  4.169  22.146  -1.209   0.027   0.349  C6   XFP  11  
XFP  C7   C9   C   0  1  N  N  N  16.472  3.952  20.768  -2.239  -0.354  -0.716  C7   XFP  12  
XFP  B    B1   B  -1  1  N  N  N  16.114  2.683  19.920  -3.711  -0.177  -0.122  B    XFP  13  
XFP  O2   O3   O   0  1  N  N  N  16.383  1.405  20.539  -3.899   1.126   0.248  O2   XFP  14  
XFP  O1   O4   O   0  1  N  N  N  16.816  2.494  18.611  -4.631  -0.518  -1.073  O1   XFP  15  
XFP  O    O5   O   0  1  N  N  N  14.662  2.632  19.655  -3.862  -0.987   0.969  O    XFP  16  
XFP  H1   H1   H   0  1  N  N  N  18.758  8.254  23.899   3.047  -3.337   0.695  H1   XFP  17  
XFP  H2   H2   H   0  1  N  N  N  15.798  7.264  25.680   3.371   0.211   1.084  H2   XFP  18  
XFP  H3   H3   H   0  1  N  N  N  16.680  5.299  24.719   1.053  -0.344   1.748  H3   XFP  19  
XFP  H4   H4   H   0  1  N  N  N  14.594  3.973  24.596   0.090   1.948   1.499  H4   XFP  20  
XFP  H5   H5   H   0  1  N  N  N  14.664  5.150  25.951   1.811   1.995   1.953  H5   XFP  21  
XFP  H6   H6   H   0  1  N  N  N  12.440  5.161  24.908   0.684   2.308  -0.868  H6   XFP  22  
XFP  H7   H7   H   0  1  N  N  N  13.174  5.510  23.306   1.369   3.608   0.138  H7   XFP  23  
XFP  H8   H8   H   0  1  N  N  N  13.192  7.282  25.783   3.036   2.756  -1.498  H8   XFP  24  
XFP  H9   H9   H   0  1  N  N  N  12.332  7.573  24.233   3.549   2.438   0.176  H9   XFP  25  
XFP  H10  H10  H   0  1  N  N  N  14.430  8.773  24.446   3.771   0.511  -1.306  H10  XFP  26  
XFP  H12  H12  H   0  1  N  N  N  17.117  5.841  22.525   0.321   0.503  -1.090  H12  XFP  27  
XFP  H13  H13  H   0  1  N  N  N  15.405  6.255  22.173   0.350  -1.181  -0.516  H13  XFP  28  
XFP  H14  H14  H   0  1  N  N  N  14.765  3.995  22.067  -1.330  -0.618   1.219  H14  XFP  29  
XFP  H15  H15  H   0  1  N  N  N  16.286  3.440  22.843  -1.359   1.066   0.644  H15  XFP  30  
XFP  H16  H16  H   0  1  N  N  N  17.562  3.935  20.916  -2.119   0.292  -1.586  H16  XFP  31  
XFP  H17  H17  H   0  1  N  N  N  16.199  4.825  20.158  -2.089  -1.393  -1.011  H17  XFP  32  
XFP  H18  H18  H   0  1  N  N  N  15.986  1.381  21.402  -3.279   1.437   0.923  H18  XFP  33  
XFP  H19  H19  H   0  1  N  N  N  17.756  2.522  18.748  -4.557  -1.431  -1.383  H19  XFP  34  
XFP  H20  H20  H   0  1  N  N  N  14.187  2.749  20.469  -4.734  -0.930   1.383  H20  XFP  35  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
XFP  O1  B    SING  N  N   1  
XFP  O   B    SING  N  N   2  
XFP  B   O2   SING  N  N   3  
XFP  B   C7   SING  N  N   4  
XFP  C7  C6   SING  N  N   5  
XFP  C6  C5   SING  N  N   6  
XFP  C5  C1   SING  N  N   7  
XFP  O4  C8   DOUB  N  N   8  
XFP  C8  O3   SING  N  N   9  
XFP  C8  C    SING  N  N  10  
XFP  N   C    SING  N  N  11  
XFP  N   C4   SING  N  N  12  
XFP  C1  C    SING  N  N  13  
XFP  C1  C2   SING  N  N  14  
XFP  C3  C4   SING  N  N  15  
XFP  C3  C2   SING  N  N  16  
XFP  O3  H1   SING  N  N  17  
XFP  C   H2   SING  N  N  18  
XFP  C1  H3   SING  N  N  19  
XFP  C2  H4   SING  N  N  20  
XFP  C2  H5   SING  N  N  21  
XFP  C3  H6   SING  N  N  22  
XFP  C3  H7   SING  N  N  23  
XFP  C4  H8   SING  N  N  24  
XFP  C4  H9   SING  N  N  25  
XFP  N   H10  SING  N  N  26  
XFP  C5  H12  SING  N  N  27  
XFP  C5  H13  SING  N  N  28  
XFP  C6  H14  SING  N  N  29  
XFP  C6  H15  SING  N  N  30  
XFP  C7  H16  SING  N  N  31  
XFP  C7  H17  SING  N  N  32  
XFP  O2  H18  SING  N  N  33  
XFP  O1  H19  SING  N  N  34  
XFP  O   H20  SING  N  N  35  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
XFP  SMILES            ACDLabs               12.01  "OC(C1C(CCCN1)CCC[B-](O)(O)O)=O"  
XFP  InChI             InChI                 1.03   "InChI=1S/C9H19BNO5/c12-9(13)8-7(4-2-6-11-8)3-1-5-10(14,15)16/h7-8,11,14-16H,1-6H2,(H,12,13)/q-1/t7-,8+/m1/s1"  
XFP  InChIKey          InChI                 1.03   WAXQJKOVLQGAHJ-SFYZADRCSA-N  
XFP  SMILES_CANONICAL  CACTVS                3.385  "OC(=O)[C@H]1NCCC[C@H]1CCC[B-](O)(O)O"  
XFP  SMILES            CACTVS                3.385  "OC(=O)[CH]1NCCC[CH]1CCC[B-](O)(O)O"  
XFP  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "[B-](CCC[C@@H]1CCCN[C@@H]1C(=O)O)(O)(O)O"  
XFP  SMILES            "OpenEye OEToolkits"  2.0.7  "[B-](CCCC1CCCNC1C(=O)O)(O)(O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
XFP  "SYSTEMATIC NAME"  ACDLabs               12.01  "{3-[(2S,3R)-2-carboxypiperidin-3-yl]propyl}(trihydroxy)borate(1-)"  
XFP  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "3-[(2~{S},3~{R})-2-carboxypiperidin-3-yl]propyl-tris(oxidanyl)boranuide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
XFP  "Create component"  2020-12-16  RCSB  
XFP  "Initial release"   2021-09-29  RCSB  
##
