data_ZMP
# 
_chem_comp.id                                    ZMP 
_chem_comp.name                                  "S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H49 N2 O8 P S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2008-09-19 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        568.704 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ZMP 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3EJB 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
ZMP O7  O1  O 0 1 N N N N N N 67.970 17.328 88.329 -11.531 2.324  1.478  O7  ZMP 1  
ZMP P1  P1  P 0 1 N N N N N N 68.114 17.610 89.972 -10.114 2.820  0.896  P1  ZMP 2  
ZMP O6  O2  O 0 1 N N N N N N 69.438 18.469 90.520 -9.068  2.639  1.927  O6  ZMP 3  
ZMP O5  O3  O 0 1 N N N N N N 66.570 17.761 90.944 -9.738  1.956  -0.409 O5  ZMP 4  
ZMP C21 C1  C 0 1 N N N N N N 65.953 19.043 91.047 -9.475  0.552  -0.363 C21 ZMP 5  
ZMP C18 C2  C 0 1 N N N N N N 64.494 18.892 91.460 -9.151  0.048  -1.771 C18 ZMP 6  
ZMP C19 C3  C 0 1 N N N N N N 63.965 17.563 90.934 -10.341 0.315  -2.695 C19 ZMP 7  
ZMP C20 C4  C 0 1 N N N N N N 63.689 20.030 90.852 -7.918  0.780  -2.304 C20 ZMP 8  
ZMP C17 C5  C 0 1 N N S N N N 64.389 18.991 92.985 -8.870  -1.455 -1.722 C17 ZMP 9  
ZMP O4  O4  O 0 1 N N N N N N 65.621 18.610 93.599 -10.061 -2.150 -1.345 O4  ZMP 10 
ZMP C16 C6  C 0 1 N N N N N N 63.249 18.193 93.562 -7.786  -1.731 -0.713 C16 ZMP 11 
ZMP O3  O5  O 0 1 N N N N N N 63.008 16.946 93.161 -8.065  -2.235 0.354  O3  ZMP 12 
ZMP N2  N1  N 0 1 N N N N N N 62.532 18.728 94.453 -6.506  -1.419 -0.997 N2  ZMP 13 
ZMP C15 C7  C 0 1 N N N N N N 61.389 18.169 95.163 -5.438  -1.785 -0.063 C15 ZMP 14 
ZMP C14 C8  C 0 1 N N N N N N 60.198 18.302 94.218 -4.092  -1.318 -0.619 C14 ZMP 15 
ZMP C13 C9  C 0 1 N N N N N N 59.791 19.749 94.038 -2.993  -1.695 0.341  C13 ZMP 16 
ZMP O2  O6  O 0 1 N N N N N N 60.698 20.722 94.089 -3.261  -2.279 1.370  O2  ZMP 17 
ZMP N1  N2  N 0 1 N N N N N N 58.581 20.037 93.829 -1.713  -1.382 0.058  N1  ZMP 18 
ZMP C12 C10 C 0 1 N N N N N N 58.016 21.361 93.606 -0.646  -1.748 0.992  C12 ZMP 19 
ZMP C11 C11 C 0 1 N N N N N N 57.292 21.748 94.890 0.701   -1.281 0.435  C11 ZMP 20 
ZMP S1  S1  S 0 1 N N N N N N 55.819 22.653 94.517 2.020   -1.734 1.589  S1  ZMP 21 
ZMP C10 C12 C 0 1 N N N N N N 55.995 23.611 93.042 3.376   -1.113 0.748  C10 ZMP 22 
ZMP O1  O7  O 0 1 N N N N N N 57.194 23.774 92.495 3.226   -0.559 -0.321 O1  ZMP 23 
ZMP C9  C13 C 0 1 N N N N N N 54.807 24.401 92.497 4.757   -1.255 1.336  C9  ZMP 24 
ZMP C8  C14 C 0 1 N N N N N N 53.480 23.712 92.794 5.780   -0.621 0.392  C8  ZMP 25 
ZMP C7  C15 C 0 1 N N N N N N 52.557 24.615 93.604 7.182   -0.765 0.989  C7  ZMP 26 
ZMP C6  C16 C 0 1 N N N N N N 51.643 25.429 92.696 8.205   -0.130 0.045  C6  ZMP 27 
ZMP C5  C17 C 0 1 N N N N N N 50.199 24.950 92.783 9.607   -0.274 0.642  C5  ZMP 28 
ZMP C4  C18 C 0 1 N N N N N N 49.473 25.185 91.463 10.631  0.360  -0.302 C4  ZMP 29 
ZMP C3  C19 C 0 1 N N N N N N 48.173 24.391 91.390 12.032  0.216  0.294  C3  ZMP 30 
ZMP C2  C20 C 0 1 N N N N N N 48.441 22.893 91.292 13.056  0.850  -0.649 C2  ZMP 31 
ZMP C1  C21 C 0 1 N N N N N N 48.913 22.276 89.980 14.457  0.706  -0.053 C1  ZMP 32 
ZMP C22 C22 C 0 1 N N N N N N 49.850 21.073 90.004 15.481  1.341  -0.997 C22 ZMP 33 
ZMP C23 C23 C 0 1 N N N N N N 50.160 20.570 88.599 16.882  1.197  -0.400 C23 ZMP 34 
ZMP C24 C24 C 0 1 N N N N N N 51.297 19.555 88.628 17.906  1.831  -1.344 C24 ZMP 35 
ZMP C25 C25 C 0 1 N N N N N N 51.203 18.580 87.460 19.308  1.687  -0.747 C25 ZMP 36 
ZMP H1  H1  H 0 1 N N N N N N 68.708 17.717 87.875 -12.265 2.414  0.855  H1  ZMP 37 
ZMP H3  H3  H 0 1 N N N N N N 66.484 19.643 91.801 -8.627  0.362  0.295  H3  ZMP 38 
ZMP H4  H4  H 0 1 N N N N N N 66.004 19.550 90.072 -10.354 0.030  0.016  H4  ZMP 39 
ZMP H5  H5  H 0 1 N N N N N N 64.545 16.738 91.372 -10.482 1.390  -2.804 H5  ZMP 40 
ZMP H6  H6  H 0 1 N N N N N N 62.906 17.454 91.212 -10.149 -0.128 -3.672 H6  ZMP 41 
ZMP H7  H7  H 0 1 N N N N N N 64.061 17.538 89.839 -11.241 -0.128 -2.266 H7  ZMP 42 
ZMP H8  H8  H 0 1 N N N N N N 64.068 20.991 91.230 -7.105  0.695  -1.582 H8  ZMP 43 
ZMP H9  H9  H 0 1 N N N N N N 63.786 20.003 89.757 -7.612  0.335  -3.250 H9  ZMP 44 
ZMP H10 H10 H 0 1 N N N N N N 62.630 19.919 91.130 -8.158  1.832  -2.458 H10 ZMP 45 
ZMP H11 H11 H 0 1 N N N N N N 64.199 20.048 93.224 -8.547  -1.797 -2.706 H11 ZMP 46 
ZMP H12 H12 H 0 1 N N N N N N 65.539 18.677 94.543 -10.406 -1.896 -0.478 H12 ZMP 47 
ZMP H13 H13 H 0 1 N N N N N N 62.783 19.662 94.706 -6.292  -0.951 -1.819 H13 ZMP 48 
ZMP H14 H14 H 0 1 N N N N N N 61.204 18.730 96.091 -5.619  -1.308 0.900  H14 ZMP 49 
ZMP H15 H15 H 0 1 N N N N N N 61.569 17.111 95.404 -5.423  -2.867 0.065  H15 ZMP 50 
ZMP H16 H16 H 0 1 N N N N N N 59.348 17.741 94.633 -3.911  -1.795 -1.583 H16 ZMP 51 
ZMP H17 H17 H 0 1 N N N N N N 60.471 17.883 93.238 -4.107  -0.236 -0.747 H17 ZMP 52 
ZMP H18 H18 H 0 1 N N N N N N 57.938 19.271 93.815 -1.499  -0.915 -0.765 H18 ZMP 53 
ZMP H19 H19 H 0 1 N N N N N N 58.817 22.084 93.389 -0.826  -1.271 1.955  H19 ZMP 54 
ZMP H20 H20 H 0 1 N N N N N N 57.308 21.335 92.764 -0.630  -2.831 1.119  H20 ZMP 55 
ZMP H21 H21 H 0 1 N N N N N N 57.027 20.836 95.446 0.881   -1.758 -0.528 H21 ZMP 56 
ZMP H22 H22 H 0 1 N N N N N N 57.955 22.373 95.506 0.686   -0.199 0.307  H22 ZMP 57 
ZMP H23 H23 H 0 1 N N N N N N 54.918 24.503 91.407 4.793   -0.752 2.303  H23 ZMP 58 
ZMP H24 H24 H 0 1 N N N N N N 54.801 25.399 92.960 4.989   -2.312 1.467  H24 ZMP 59 
ZMP H25 H25 H 0 1 N N N N N N 52.988 23.457 91.844 5.744   -1.123 -0.574 H25 ZMP 60 
ZMP H26 H26 H 0 1 N N N N N N 53.674 22.792 93.365 5.548   0.436  0.261  H26 ZMP 61 
ZMP H27 H27 H 0 1 N N N N N N 53.168 25.303 94.208 7.219   -0.262 1.955  H27 ZMP 62 
ZMP H28 H28 H 0 1 N N N N N N 51.940 23.993 94.269 7.414   -1.821 1.120  H28 ZMP 63 
ZMP H29 H29 H 0 1 N N N N N N 51.991 25.330 91.657 8.169   -0.633 -0.922 H29 ZMP 64 
ZMP H30 H30 H 0 1 N N N N N N 51.688 26.486 92.998 7.973   0.926  -0.086 H30 ZMP 65 
ZMP H31 H31 H 0 1 N N N N N N 49.683 25.502 93.582 9.644   0.228  1.608  H31 ZMP 66 
ZMP H32 H32 H 0 1 N N N N N N 50.189 23.875 93.014 9.839   -1.331 0.773  H32 ZMP 67 
ZMP H33 H33 H 0 1 N N N N N N 50.128 24.875 90.635 10.594  -0.143 -1.269 H33 ZMP 68 
ZMP H34 H34 H 0 1 N N N N N N 49.243 26.256 91.368 10.398  1.417  -0.433 H34 ZMP 69 
ZMP H35 H35 H 0 1 N N N N N N 47.607 24.712 90.503 12.069  0.719  1.261  H35 ZMP 70 
ZMP H36 H36 H 0 1 N N N N N N 47.581 24.590 92.295 12.264  -0.841 0.426  H36 ZMP 71 
ZMP H37 H37 H 0 1 N N N N N N 47.502 22.387 91.559 13.019  0.348  -1.616 H37 ZMP 72 
ZMP H38 H38 H 0 1 N N N N N N 49.209 22.660 92.044 12.823  1.907  -0.780 H38 ZMP 73 
ZMP H39 H39 H 0 1 N N N N N N 49.429 23.071 89.421 14.494  1.209  0.914  H39 ZMP 74 
ZMP H40 H40 H 0 1 N N N N N N 48.012 21.967 89.430 14.690  -0.350 0.078  H40 ZMP 75 
ZMP H41 H41 H 0 1 N N N N N N 49.374 20.262 90.576 15.444  0.838  -1.963 H41 ZMP 76 
ZMP H42 H42 H 0 1 N N N N N N 50.791 21.364 90.494 15.248  2.397  -1.128 H42 ZMP 77 
ZMP H43 H43 H 0 1 N N N N N N 50.452 21.422 87.967 16.919  1.700  0.567  H43 ZMP 78 
ZMP H44 H44 H 0 1 N N N N N N 49.262 20.094 88.180 17.115  0.140  -0.269 H44 ZMP 79 
ZMP H45 H45 H 0 1 N N N N N N 51.248 18.990 89.571 17.869  1.328  -2.310 H45 ZMP 80 
ZMP H46 H46 H 0 1 N N N N N N 52.256 20.090 88.571 17.674  2.888  -1.475 H46 ZMP 81 
ZMP H47 H47 H 0 1 N N N N N N 52.036 17.864 87.512 19.540  0.630  -0.616 H47 ZMP 82 
ZMP H48 H48 H 0 1 N N N N N N 50.248 18.036 87.513 20.037  2.139  -1.419 H48 ZMP 83 
ZMP H49 H49 H 0 1 N N N N N N 51.256 19.137 86.513 19.344  2.190  0.220  H49 ZMP 84 
ZMP O8  O8  O 0 1 N Y N N N N 68.325 16.072 90.326 -10.213 4.377  0.499  O8  ZMP 85 
ZMP H2  H2  H 0 1 N Y N N N N 69.156 15.961 90.773 -10.437 4.958  1.238  H2  ZMP 86 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ZMP C25 C24 SING N N 1  
ZMP O7  P1  SING N N 2  
ZMP C23 C24 SING N N 3  
ZMP C23 C22 SING N N 4  
ZMP P1  O6  DOUB N N 5  
ZMP P1  O5  SING N N 6  
ZMP C1  C22 SING N N 7  
ZMP C1  C2  SING N N 8  
ZMP C20 C18 SING N N 9  
ZMP C19 C18 SING N N 10 
ZMP O5  C21 SING N N 11 
ZMP C21 C18 SING N N 12 
ZMP C2  C3  SING N N 13 
ZMP C3  C4  SING N N 14 
ZMP C18 C17 SING N N 15 
ZMP C4  C5  SING N N 16 
ZMP O1  C10 DOUB N N 17 
ZMP C9  C8  SING N N 18 
ZMP C9  C10 SING N N 19 
ZMP C6  C5  SING N N 20 
ZMP C6  C7  SING N N 21 
ZMP C8  C7  SING N N 22 
ZMP C17 C16 SING N N 23 
ZMP C17 O4  SING N N 24 
ZMP C10 S1  SING N N 25 
ZMP O3  C16 DOUB N N 26 
ZMP C16 N2  SING N N 27 
ZMP C12 N1  SING N N 28 
ZMP C12 C11 SING N N 29 
ZMP N1  C13 SING N N 30 
ZMP C13 O2  DOUB N N 31 
ZMP C13 C14 SING N N 32 
ZMP C14 C15 SING N N 33 
ZMP N2  C15 SING N N 34 
ZMP S1  C11 SING N N 35 
ZMP O7  H1  SING N N 36 
ZMP C21 H3  SING N N 37 
ZMP C21 H4  SING N N 38 
ZMP C19 H5  SING N N 39 
ZMP C19 H6  SING N N 40 
ZMP C19 H7  SING N N 41 
ZMP C20 H8  SING N N 42 
ZMP C20 H9  SING N N 43 
ZMP C20 H10 SING N N 44 
ZMP C17 H11 SING N N 45 
ZMP O4  H12 SING N N 46 
ZMP N2  H13 SING N N 47 
ZMP C15 H14 SING N N 48 
ZMP C15 H15 SING N N 49 
ZMP C14 H16 SING N N 50 
ZMP C14 H17 SING N N 51 
ZMP N1  H18 SING N N 52 
ZMP C12 H19 SING N N 53 
ZMP C12 H20 SING N N 54 
ZMP C11 H21 SING N N 55 
ZMP C11 H22 SING N N 56 
ZMP C9  H23 SING N N 57 
ZMP C9  H24 SING N N 58 
ZMP C8  H25 SING N N 59 
ZMP C8  H26 SING N N 60 
ZMP C7  H27 SING N N 61 
ZMP C7  H28 SING N N 62 
ZMP C6  H29 SING N N 63 
ZMP C6  H30 SING N N 64 
ZMP C5  H31 SING N N 65 
ZMP C5  H32 SING N N 66 
ZMP C4  H33 SING N N 67 
ZMP C4  H34 SING N N 68 
ZMP C3  H35 SING N N 69 
ZMP C3  H36 SING N N 70 
ZMP C2  H37 SING N N 71 
ZMP C2  H38 SING N N 72 
ZMP C1  H39 SING N N 73 
ZMP C1  H40 SING N N 74 
ZMP C22 H41 SING N N 75 
ZMP C22 H42 SING N N 76 
ZMP C23 H43 SING N N 77 
ZMP C23 H44 SING N N 78 
ZMP C24 H45 SING N N 79 
ZMP C24 H46 SING N N 80 
ZMP C25 H47 SING N N 81 
ZMP C25 H48 SING N N 82 
ZMP C25 H49 SING N N 83 
ZMP P1  O8  SING N N 84 
ZMP O8  H2  SING N N 85 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
ZMP SMILES           ACDLabs              12.01 "OP(=O)(OCC(C(C(NCCC(=O)NCCSC(=O)CCCCCCCCCCCCC)=O)O)(C)C)O"                                                                                                                                    
ZMP InChI            InChI                1.03  "InChI=1S/C25H49N2O8PS/c1-4-5-6-7-8-9-10-11-12-13-14-15-22(29)37-19-18-26-21(28)16-17-27-24(31)23(30)25(2,3)20-35-36(32,33)34/h23,30H,4-20H2,1-3H3,(H,26,28)(H,27,31)(H2,32,33,34)/t23-/m1/s1" 
ZMP InChIKey         InChI                1.03  HDTINWYIVVMRIN-HSZRJFAPSA-N                                                                                                                                                                    
ZMP SMILES_CANONICAL CACTVS               3.385 "CCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)[C@@H](O)C(C)(C)CO[P](O)(O)=O"                                                                                                                             
ZMP SMILES           CACTVS               3.385 "CCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)[CH](O)C(C)(C)CO[P](O)(O)=O"                                                                                                                               
ZMP SMILES_CANONICAL "OpenEye OEToolkits" 2.0.5 "CCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)[C@H](C(C)(C)COP(=O)(O)O)O"                                                                                                                                
ZMP SMILES           "OpenEye OEToolkits" 2.0.5 "CCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(C(C)(C)COP(=O)(O)O)O"                                                                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
ZMP "SYSTEMATIC NAME" ACDLabs              12.01 "S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate"         
ZMP "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.5 "~{S}-[2-[3-[[(2~{S})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] tetradecanethioate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
ZMP "Create component"   2008-09-19 RCSB 
ZMP "Modify descriptor"  2011-06-04 RCSB 
ZMP "Other modification" 2016-08-16 RCSB 
ZMP "Modify PCM"         2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            ZMP 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Lipid/lipid-like 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               P1 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
