data_JMQ
# 
_chem_comp.id                                    JMQ 
_chem_comp.name                                  "7-(((2R,3R,4S)-3,4-dihydroxy-2-(hydroxymethyl)pyrrolidin-1-yl)methyl)-3H-pyrrolo[3,2-d]pyrimidin-4(5H)-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H16 N4 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2008-10-02 
_chem_comp.pdbx_modified_date                    2011-11-17 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        280.280 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     JMQ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3EPW 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
JMQ C1     C1     C 0 1 N N N 18.906 9.748  39.434 0.538  -1.154 0.027  C1  JMQ 1  
JMQ C2     C2     C 0 1 N N N 18.077 8.793  43.789 -3.185 0.332  -2.102 C2  JMQ 2  
JMQ C8     C8     C 0 1 Y N N 16.389 9.277  39.710 -1.261 -0.793 1.792  C3  JMQ 3  
JMQ C9     C9     C 0 1 Y N N 17.633 9.375  40.212 -0.835 -0.768 0.513  C4  JMQ 4  
JMQ O6     O6     O 0 1 N N N 14.612 8.248  43.421 -5.154 0.613  0.739  O1  JMQ 5  
JMQ C6     C6     C 0 1 N N N 15.787 8.523  43.123 -4.191 0.389  0.025  C5  JMQ 6  
JMQ N1     N1     N 0 1 N N N 16.754 8.493  44.100 -4.261 0.582  -1.311 N1  JMQ 7  
JMQ N3     N3     N 0 1 N N N 18.435 9.086  42.561 -2.056 -0.098 -1.618 N2  JMQ 8  
JMQ C4     C4     C 0 1 Y N N 17.521 9.110  41.571 -1.904 -0.317 -0.290 C6  JMQ 9  
JMQ C5     C5     C 0 1 Y N N 16.185 8.840  41.834 -2.979 -0.076 0.573  C7  JMQ 10 
JMQ N7     N7     N 0 1 Y N N 15.530 8.951  40.677 -2.556 -0.377 1.847  N3  JMQ 11 
JMQ "N4'"  "N4'"  N 0 1 N N N 19.828 8.603  39.141 1.339  0.058  -0.191 N4  JMQ 12 
JMQ "C1'"  "C1'"  C 0 1 N N N 19.735 7.435  40.059 1.628  0.740  1.088  C8  JMQ 13 
JMQ "C2'"  "C2'"  C 0 1 N N S 20.654 6.412  39.421 3.035  1.359  0.898  C9  JMQ 14 
JMQ "O2'"  "O2'"  O 0 1 N N N 21.974 6.539  39.988 2.960  2.590  0.177  O2  JMQ 15 
JMQ "C3'"  "C3'"  C 0 1 N N R 20.630 6.717  37.910 3.747  0.266  0.058  C10 JMQ 16 
JMQ "O3'"  "O3'"  O 0 1 N N N 21.947 6.922  37.379 4.799  0.835  -0.724 O3  JMQ 17 
JMQ "C4'"  "C4'"  C 0 1 N N R 19.804 8.013  37.761 2.618  -0.265 -0.850 C11 JMQ 18 
JMQ "C5'"  "C5'"  C 0 1 N N N 18.391 7.690  37.226 2.751  -1.781 -1.014 C12 JMQ 19 
JMQ "O5'"  "O5'"  O 0 1 N N N 17.692 8.852  36.765 2.849  -2.392 0.274  O4  JMQ 20 
JMQ H11    H11    H 0 1 N N N 16.505 8.254  45.039 -5.086 0.902  -1.708 H11 JMQ 21 
JMQ H1     H1     H 0 1 N N N 18.594 10.180 38.472 1.025  -1.782 0.774  H1  JMQ 22 
JMQ H1A    H1A    H 0 1 N N N 19.464 10.480 40.037 0.451  -1.706 -0.909 H2  JMQ 23 
JMQ H2     H2     H 0 1 N N N 18.821 8.785  44.571 -3.271 0.491  -3.166 H3  JMQ 24 
JMQ H8     H8     H 0 1 N N N 16.124 9.439  38.675 -0.667 -1.096 2.642  H4  JMQ 25 
JMQ HN7    HN7    H 0 1 N N N 14.547 8.811  40.554 -3.092 -0.305 2.652  H5  JMQ 26 
JMQ "H1'"  "H1'"  H 0 1 N N N 20.063 7.694  41.076 0.892  1.521  1.276  H6  JMQ 27 
JMQ "H1'A" "H1'A" H 0 0 N N N 18.703 7.061  40.133 1.637  0.021  1.908  H7  JMQ 28 
JMQ "H2'"  "H2'"  H 0 1 N N N 20.337 5.374  39.600 3.532  1.500  1.858  H8  JMQ 29 
JMQ "HO2'" "HO2'" H 0 0 N N N 22.553 5.899  39.590 2.440  3.274  0.621  H9  JMQ 30 
JMQ "H3'"  "H3'"  H 0 1 N N N 20.200 5.870  37.356 4.132  -0.525 0.702  H10 JMQ 31 
JMQ "HO3'" "HO3'" H 0 0 N N N 21.889 7.107  36.449 5.497  1.250  -0.200 H11 JMQ 32 
JMQ "H4'"  "H4'"  H 0 1 N N N 20.202 8.730  37.028 2.666  0.221  -1.824 H12 JMQ 33 
JMQ "H5'"  "H5'"  H 0 1 N N N 18.491 6.989  36.384 1.875  -2.168 -1.534 H13 JMQ 34 
JMQ "H5'A" "H5'A" H 0 0 N N N 17.808 7.235  38.040 3.646  -2.006 -1.593 H14 JMQ 35 
JMQ "HO5'" "HO5'" H 0 0 N N N 16.833 8.600  36.448 2.936  -3.355 0.247  H15 JMQ 36 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
JMQ C1    C9     SING N N 1  
JMQ C1    "N4'"  SING N N 2  
JMQ C2    N1     SING N N 3  
JMQ C2    N3     DOUB N N 4  
JMQ C8    C9     DOUB Y N 5  
JMQ C8    N7     SING Y N 6  
JMQ C9    C4     SING Y N 7  
JMQ O6    C6     DOUB N N 8  
JMQ C6    N1     SING N N 9  
JMQ C6    C5     SING N N 10 
JMQ N3    C4     SING N N 11 
JMQ C4    C5     DOUB Y N 12 
JMQ C5    N7     SING Y N 13 
JMQ "N4'" "C1'"  SING N N 14 
JMQ "N4'" "C4'"  SING N N 15 
JMQ "C1'" "C2'"  SING N N 16 
JMQ "C2'" "O2'"  SING N N 17 
JMQ "C2'" "C3'"  SING N N 18 
JMQ "C3'" "O3'"  SING N N 19 
JMQ "C3'" "C4'"  SING N N 20 
JMQ "C4'" "C5'"  SING N N 21 
JMQ "C5'" "O5'"  SING N N 22 
JMQ N1    H11    SING N N 23 
JMQ C1    H1     SING N N 24 
JMQ C1    H1A    SING N N 25 
JMQ C2    H2     SING N N 26 
JMQ C8    H8     SING N N 27 
JMQ N7    HN7    SING N N 28 
JMQ "C1'" "H1'"  SING N N 29 
JMQ "C1'" "H1'A" SING N N 30 
JMQ "C2'" "H2'"  SING N N 31 
JMQ "O2'" "HO2'" SING N N 32 
JMQ "C3'" "H3'"  SING N N 33 
JMQ "O3'" "HO3'" SING N N 34 
JMQ "C4'" "H4'"  SING N N 35 
JMQ "C5'" "H5'"  SING N N 36 
JMQ "C5'" "H5'A" SING N N 37 
JMQ "O5'" "HO5'" SING N N 38 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
JMQ SMILES           ACDLabs              12.01 "O=C2NC=Nc1c(cnc12)CN3C(C(O)C(O)C3)CO"                                                                                                     
JMQ SMILES_CANONICAL CACTVS               3.370 "OC[C@@H]1[C@@H](O)[C@@H](O)CN1Cc2c[nH]c3C(=O)NC=Nc23"                                                                                     
JMQ SMILES           CACTVS               3.370 "OC[CH]1[CH](O)[CH](O)CN1Cc2c[nH]c3C(=O)NC=Nc23"                                                                                           
JMQ SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1c(c2c([nH]1)C(=O)NC=N2)C[N@]3C[C@@H]([C@@H]([C@H]3CO)O)O"                                                                               
JMQ SMILES           "OpenEye OEToolkits" 1.7.0 "c1c(c2c([nH]1)C(=O)NC=N2)CN3CC(C(C3CO)O)O"                                                                                                
JMQ InChI            InChI                1.03  "InChI=1S/C12H16N4O4/c17-4-7-11(19)8(18)3-16(7)2-6-1-13-10-9(6)14-5-15-12(10)20/h1,5,7-8,11,13,17-19H,2-4H2,(H,14,15,20)/t7-,8+,11-/m1/s1" 
JMQ InChIKey         InChI                1.03  OKGGSJRJIFFOGK-VHSKPIJISA-N                                                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
JMQ "SYSTEMATIC NAME" ACDLabs              12.01 "7-{[(2R,3R,4S)-3,4-dihydroxy-2-(hydroxymethyl)pyrrolidin-1-yl]methyl}-3,5-dihydro-4H-pyrrolo[3,2-d]pyrimidin-4-one" 
JMQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "7-[[(1S,2R,3R,4S)-3,4-dihydroxy-2-(hydroxymethyl)pyrrolidin-1-yl]methyl]-3,5-dihydropyrrolo[3,2-d]pyrimidin-4-one"  
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
JMQ "Other modification"   2008-10-02 RCSB 
JMQ "Other modification"   2010-11-24 RCSB 
JMQ "Modify aromatic_flag" 2011-06-04 RCSB 
JMQ "Modify descriptor"    2011-06-04 RCSB 
# 
