data_VGQ
#

_chem_comp.id                                   VGQ
_chem_comp.name                                 "2-(2-chlorophenyl)sulfanyl-~{N}-[(4-cyanophenyl)methyl]-~{N}-[(5-oxidanyl-1,3,4-oxadiazol-2-yl)methyl]ethanamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C19 H15 Cl N4 O3 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-05-18
_chem_comp.pdbx_modified_date                   2021-10-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       414.865
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    VGQ
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7OJY
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
VGQ  C15  C1   C   0  1  N  N  N  10.216  49.241  -36.248   5.964  -3.456   0.980  C15  VGQ   1  
VGQ  C23  C2   C   0  1  Y  N  N   5.126  50.258  -31.242  -4.680   0.055   2.219  C23  VGQ   2  
VGQ  C24  C3   C   0  1  Y  N  N   4.662  49.576  -30.104  -5.835  -0.654   1.944  C24  VGQ   3  
VGQ  C11  C4   C   0  1  Y  N  N   8.379  49.555  -37.799   4.215  -2.717  -0.571  C11  VGQ   4  
VGQ  C13  C5   C   0  1  Y  N  N   7.983  49.771  -35.401   5.205  -1.125   0.951  C13  VGQ   5  
VGQ  C10  C6   C   0  1  Y  N  N   7.034  49.838  -38.050   3.403  -1.721  -1.073  C10  VGQ   6  
VGQ  C14  C7   C   0  1  Y  N  N   6.641  50.060  -35.658   4.384  -0.140   0.443  C14  VGQ   7  
VGQ  C22  C8   C   0  1  Y  N  N   4.207  50.669  -32.214  -3.571  -0.086   1.407  C22  VGQ   8  
VGQ  C25  C9   C   0  1  Y  N  N   3.299  49.345  -29.914  -5.883  -1.511   0.859  C25  VGQ   9  
VGQ  C12  C10  C   0  1  Y  N  N   8.844  49.520  -36.482   5.122  -2.425   0.450  C12  VGQ  10  
VGQ  C9   C11  C   0  1  Y  N  N   6.163  50.096  -36.981   3.487  -0.436  -0.568  C9   VGQ  11  
VGQ  C21  C12  C   0  1  Y  N  N   2.832  50.415  -32.055  -3.617  -0.941   0.313  C21  VGQ  12  
VGQ  C26  C13  C   0  1  Y  N  N   2.389  49.766  -30.894  -4.776  -1.662   0.047  C26  VGQ  13  
VGQ  C5   C14  C   0  1  Y  N  N   5.626  53.108  -35.904   0.743   2.910   0.415  C5   VGQ  14  
VGQ  C2   C15  C   0  1  Y  N  N   7.024  53.444  -34.397   0.655   4.965  -0.226  C2   VGQ  15  
VGQ  C17  C16  C   0  1  N  N  N   3.283  50.743  -35.364   0.296  -0.059  -0.744  C17  VGQ  16  
VGQ  C8   C17  C   0  1  N  N  N   4.727  50.383  -37.291   2.597   0.647  -1.122  C8   VGQ  17  
VGQ  C6   C18  C   0  1  N  N  N   4.327  52.718  -36.502   1.241   1.548   0.825  C6   VGQ  18  
VGQ  C19  C19  C   0  1  N  N  N   2.564  51.736  -34.499  -0.990  -0.014   0.041  C19  VGQ  19  
VGQ  N16  N1   N   0  1  N  N  N  11.339  49.021  -36.062   6.631  -4.273   1.401  N16  VGQ  20  
VGQ  N4   N2   N   0  1  Y  N  N   6.736  53.449  -36.529  -0.500   3.288   0.353  N4   VGQ  21  
VGQ  N3   N3   N   0  1  Y  N  N   7.669  53.684  -35.527  -0.558   4.515  -0.029  N3   VGQ  22  
VGQ  N7   N4   N   0  1  N  N  N   4.129  51.289  -36.326   1.347   0.690  -0.358  N7   VGQ  23  
VGQ  O18  O1   O   0  1  N  N  N   3.118  49.543  -35.204   0.384  -0.769  -1.724  O18  VGQ  24  
VGQ  O28  O2   O   0  1  Y  N  N   5.721  53.091  -34.539   1.505   3.959   0.051  O28  VGQ  25  
VGQ  O1   O3   O   0  1  N  N  N   7.485  53.515  -33.141   0.993   6.212  -0.632  O1   VGQ  26  
VGQ  S20  S1   S   0  1  N  N  N   1.598  50.892  -33.230  -2.205  -1.123  -0.724  S20  VGQ  27  
VGQ  CL1  CL1  CL  0  0  N  N  N   0.694  49.531  -30.674  -4.839  -2.732  -1.319  CL1  VGQ  28  
VGQ  H1   H1   H   0  1  N  N  N   6.179  50.462  -31.365  -4.647   0.723   3.067  H1   VGQ  29  
VGQ  H2   H2   H   0  1  N  N  N   5.370  49.226  -29.367  -6.702  -0.538   2.578  H2   VGQ  30  
VGQ  H3   H3   H   0  1  N  N  N   9.056  49.364  -38.619   4.145  -3.721  -0.963  H3   VGQ  31  
VGQ  H4   H4   H   0  1  N  N  N   8.353  49.741  -34.387   5.905  -0.892   1.740  H4   VGQ  32  
VGQ  H5   H5   H   0  1  N  N  N   6.666  49.858  -39.065   2.701  -1.945  -1.862  H5   VGQ  33  
VGQ  H6   H6   H   0  1  N  N  N   5.967  50.257  -34.837   4.441   0.865   0.835  H6   VGQ  34  
VGQ  H7   H7   H   0  1  N  N  N   4.557  51.186  -33.095  -2.670   0.469   1.623  H7   VGQ  35  
VGQ  H8   H8   H   0  1  N  N  N   2.949  48.847  -29.022  -6.787  -2.064   0.648  H8   VGQ  36  
VGQ  H9   H9   H   0  1  N  N  N   4.664  50.838  -38.291   3.104   1.609  -1.044  H9   VGQ  37  
VGQ  H10  H10  H   0  1  N  N  N   4.167  49.436  -37.283   2.376   0.436  -2.168  H10  VGQ  38  
VGQ  H11  H11  H   0  1  N  N  N   4.329  52.960  -37.575   2.221   1.645   1.292  H11  VGQ  39  
VGQ  H12  H12  H   0  1  N  N  N   3.514  53.266  -36.004   0.542   1.104   1.534  H12  VGQ  40  
VGQ  H13  H13  H   0  1  N  N  N   3.301  52.394  -34.015  -0.801  -0.334   1.066  H13  VGQ  41  
VGQ  H14  H14  H   0  1  N  N  N   1.890  52.339  -35.125  -1.379   1.004   0.044  H14  VGQ  42  
VGQ  H15  H15  H   0  1  N  N  N   8.398  53.777  -33.153   1.129   6.838   0.092  H15  VGQ  43  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
VGQ  C10  C11  DOUB  Y  N   1  
VGQ  C10  C9   SING  Y  N   2  
VGQ  C11  C12  SING  Y  N   3  
VGQ  C8   C9   SING  N  N   4  
VGQ  C8   N7   SING  N  N   5  
VGQ  C9   C14  DOUB  Y  N   6  
VGQ  N4   C5   DOUB  Y  N   7  
VGQ  N4   N3   SING  Y  N   8  
VGQ  C6   N7   SING  N  N   9  
VGQ  C6   C5   SING  N  N  10  
VGQ  C12  C15  SING  N  N  11  
VGQ  C12  C13  DOUB  Y  N  12  
VGQ  N7   C17  SING  N  N  13  
VGQ  C15  N16  TRIP  N  N  14  
VGQ  C5   O28  SING  Y  N  15  
VGQ  C14  C13  SING  Y  N  16  
VGQ  N3   C2   DOUB  Y  N  17  
VGQ  C17  O18  DOUB  N  N  18  
VGQ  C17  C19  SING  N  N  19  
VGQ  O28  C2   SING  Y  N  20  
VGQ  C19  S20  SING  N  N  21  
VGQ  C2   O1   SING  N  N  22  
VGQ  S20  C21  SING  N  N  23  
VGQ  C22  C21  DOUB  Y  N  24  
VGQ  C22  C23  SING  Y  N  25  
VGQ  C21  C26  SING  Y  N  26  
VGQ  C23  C24  DOUB  Y  N  27  
VGQ  C26  CL1  SING  N  N  28  
VGQ  C26  C25  DOUB  Y  N  29  
VGQ  C24  C25  SING  Y  N  30  
VGQ  C23  H1   SING  N  N  31  
VGQ  C24  H2   SING  N  N  32  
VGQ  C11  H3   SING  N  N  33  
VGQ  C13  H4   SING  N  N  34  
VGQ  C10  H5   SING  N  N  35  
VGQ  C14  H6   SING  N  N  36  
VGQ  C22  H7   SING  N  N  37  
VGQ  C25  H8   SING  N  N  38  
VGQ  C8   H9   SING  N  N  39  
VGQ  C8   H10  SING  N  N  40  
VGQ  C6   H11  SING  N  N  41  
VGQ  C6   H12  SING  N  N  42  
VGQ  C19  H13  SING  N  N  43  
VGQ  C19  H14  SING  N  N  44  
VGQ  O1   H15  SING  N  N  45  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
VGQ  InChI             InChI                 1.03   "InChI=1S/C19H15ClN4O3S/c20-15-3-1-2-4-16(15)28-12-18(25)24(11-17-22-23-19(26)27-17)10-14-7-5-13(9-21)6-8-14/h1-8H,10-12H2,(H,23,26)"  
VGQ  InChIKey          InChI                 1.03   NBNRDDVQRANCKW-UHFFFAOYSA-N  
VGQ  SMILES_CANONICAL  CACTVS                3.385  "Oc1oc(CN(Cc2ccc(cc2)C#N)C(=O)CSc3ccccc3Cl)nn1"  
VGQ  SMILES            CACTVS                3.385  "Oc1oc(CN(Cc2ccc(cc2)C#N)C(=O)CSc3ccccc3Cl)nn1"  
VGQ  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1ccc(c(c1)SCC(=O)N(Cc2ccc(cc2)C#N)Cc3nnc(o3)O)Cl"  
VGQ  SMILES            "OpenEye OEToolkits"  2.0.7  "c1ccc(c(c1)SCC(=O)N(Cc2ccc(cc2)C#N)Cc3nnc(o3)O)Cl"  
#
_pdbx_chem_comp_identifier.comp_id          VGQ
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "2-(2-chlorophenyl)sulfanyl-~{N}-[(4-cyanophenyl)methyl]-~{N}-[(5-oxidanyl-1,3,4-oxadiazol-2-yl)methyl]ethanamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
VGQ  "Create component"  2021-05-18  PDBE  
VGQ  "Initial release"   2021-10-06  RCSB  
##
