data_CDR
#

_chem_comp.id                                   CDR
_chem_comp.name                                 "(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol"
_chem_comp.type                                 "D-saccharide, beta linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H12 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "2,3-DIDEOXYFUCOSE"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-07-08
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       132.158
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    CDR
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1D83
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     CDR
_pdbx_chem_comp_synonyms.name        "2,3-DIDEOXYFUCOSE"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
CDR  O1   OGL  O  0  1  N  Y  N   8.287  -2.726  3.603   2.888   0.313   0.090  O1   CDR   1  
CDR  C1   C1   C  0  1  N  N  R   7.774  -2.444  4.912   1.563  -0.007  -0.337  C1   CDR   2  
CDR  C2   C2   C  0  1  N  N  N   7.067  -3.739  5.359   1.137  -1.342   0.279  C2   CDR   3  
CDR  C3   C3   C  0  1  N  N  N   6.508  -3.600  6.791  -0.306  -1.650  -0.134  C3   CDR   4  
CDR  C4   C4   C  0  1  N  N  S   7.759  -3.302  7.660  -1.208  -0.493   0.304  C4   CDR   5  
CDR  O4   O4   O  0  1  N  N  N   7.300  -3.187  9.003  -2.545  -0.734  -0.140  O4   CDR   6  
CDR  C5   C5   C  0  1  N  N  R   8.322  -1.915  7.188  -0.692   0.810  -0.313  C5   CDR   7  
CDR  O5   O1   O  0  1  N  N  N   8.800  -2.089  5.850   0.664   1.020   0.087  O5   CDR   8  
CDR  C6   C6   C  0  1  N  N  N   9.455  -1.549  8.177  -1.553   1.979   0.169  C6   CDR   9  
CDR  HO1  HOG  H  0  1  N  Y  N   8.739  -1.960  3.268   3.224   1.148  -0.263  HO1  CDR  10  
CDR  H1   H1   H  0  1  N  N  N   7.025  -1.640  4.855   1.540  -0.085  -1.424  H1   CDR  11  
CDR  H2   H21  H  0  1  N  N  N   6.238  -3.952  4.669   1.795  -2.135  -0.078  H2   CDR  12  
CDR  H22  H22  H  0  1  N  N  N   7.788  -4.569  5.334   1.199  -1.279   1.366  H22  CDR  13  
CDR  H3   H31  H  0  1  N  N  N   5.786  -2.772  6.849  -0.358  -1.763  -1.217  H3   CDR  14  
CDR  H32  H32  H  0  1  N  N  N   6.023  -4.533  7.113  -0.635  -2.571   0.346  H32  CDR  15  
CDR  H4   H4   H  0  1  N  N  N   8.517  -4.089  7.535  -1.195  -0.412   1.391  H4   CDR  16  
CDR  HO4  HO4  H  0  1  N  N  N   8.036  -3.003  9.575  -2.934  -1.548   0.209  HO4  CDR  17  
CDR  H5   H5   H  0  1  N  N  N   7.525  -1.158  7.237  -0.744   0.743  -1.399  H5   CDR  18  
CDR  H61  H61  H  0  1  N  N  N   9.890  -0.579  7.894  -1.499   2.046   1.256  H61  CDR  19  
CDR  H62  H62  H  0  1  N  N  N   9.045  -1.484  9.196  -1.184   2.907  -0.270  H62  CDR  20  
CDR  H63  H63  H  0  1  N  N  N  10.235  -2.324  8.144  -2.587   1.819  -0.135  H63  CDR  21  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CDR  O1  C1   SING  N  N   1  
CDR  O1  HO1  SING  N  N   2  
CDR  C1  C2   SING  N  N   3  
CDR  C1  O5   SING  N  N   4  
CDR  C1  H1   SING  N  N   5  
CDR  C2  C3   SING  N  N   6  
CDR  C2  H2   SING  N  N   7  
CDR  C2  H22  SING  N  N   8  
CDR  C3  C4   SING  N  N   9  
CDR  C3  H3   SING  N  N  10  
CDR  C3  H32  SING  N  N  11  
CDR  C4  O4   SING  N  N  12  
CDR  C4  C5   SING  N  N  13  
CDR  C4  H4   SING  N  N  14  
CDR  O4  HO4  SING  N  N  15  
CDR  C5  O5   SING  N  N  16  
CDR  C5  C6   SING  N  N  17  
CDR  C5  H5   SING  N  N  18  
CDR  C6  H61  SING  N  N  19  
CDR  C6  H62  SING  N  N  20  
CDR  C6  H63  SING  N  N  21  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
CDR  SMILES            ACDLabs               12.01  "OC1C(OC(O)CC1)C"  
CDR  InChI             InChI                 1.03   "InChI=1S/C6H12O3/c1-4-5(7)2-3-6(8)9-4/h4-8H,2-3H2,1H3/t4-,5+,6-/m1/s1"  
CDR  InChIKey          InChI                 1.03   ZCYMCBOUZXAAJG-NGJCXOISSA-N  
CDR  SMILES_CANONICAL  CACTVS                3.385  "C[C@H]1O[C@@H](O)CC[C@@H]1O"  
CDR  SMILES            CACTVS                3.385  "C[CH]1O[CH](O)CC[CH]1O"  
CDR  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "C[C@@H]1[C@H](CC[C@@H](O1)O)O"  
CDR  SMILES            "OpenEye OEToolkits"  1.7.6  "CC1C(CCC(O1)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
CDR  "SYSTEMATIC NAME"  ACDLabs               12.01  "(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol"  
CDR  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "(2R,5S,6R)-6-methyloxane-2,5-diol"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
CDR  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
CDR  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
CDR  "CARBOHYDRATE ANOMER"                  beta      PDB  ?  
CDR  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
CDR  "Create component"          1999-07-08  RCSB  
CDR  "Modify descriptor"         2011-06-04  RCSB  
CDR  "Modify leaving atom flag"  2013-10-31  RCSB  
CDR  "Other modification"        2020-07-03  RCSB  
CDR  "Modify name"               2020-07-17  RCSB  
CDR  "Modify synonyms"           2020-07-17  RCSB  
CDR  "Modify linking type"       2020-07-17  RCSB  
CDR  "Modify atom id"            2020-07-17  RCSB  
CDR  "Modify component atom id"  2020-07-17  RCSB  
CDR  "Modify leaving atom flag"  2020-07-17  RCSB  
##
