data_KPR
# 
_chem_comp.id                                    KPR 
_chem_comp.name                                  "[(~{E},4~{S})-4-azanyl-3-oxidanylidene-pent-1-enyl] dihydrogen phosphate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C5 H10 N O5 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-08-11 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        195.110 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     KPR 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5LNT 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
KPR O3P O1  O 0 1 N N N N N N 9.450  -29.156 -9.440  2.842  -1.377 -0.717 O3P KPR 1  
KPR P   P1  P 0 1 N N N N N N 8.956  -29.928 -10.629 2.625  0.025  0.045  P   KPR 2  
KPR O1P O2  O 0 1 N N N N N N 7.773  -29.297 -11.317 2.621  -0.204 1.507  O1P KPR 3  
KPR O2P O3  O 0 1 N N N N N N 8.840  -31.423 -10.421 3.820  1.034  -0.338 O2P KPR 4  
KPR O5  O4  O 0 1 N N N N N N 10.137 -29.695 -11.699 1.218  0.667  -0.402 O5  KPR 5  
KPR C5  C1  C 0 1 N N N N N N 11.123 -30.701 -12.040 0.103  -0.006 -0.060 C5  KPR 6  
KPR C4  C2  C 0 1 N N N N N N 12.391 -30.317 -12.170 -1.110 0.477  -0.404 C4  KPR 7  
KPR C3  C3  C 0 1 N N N N N N 13.373 -31.352 -12.510 -2.274 -0.226 -0.046 C3  KPR 8  
KPR O3  O5  O 0 1 N N N N N N 12.967 -32.356 -13.061 -2.189 -1.268 0.572  O3  KPR 9  
KPR C2  C4  C 0 1 N N S N N N 14.832 -31.199 -12.193 -3.628 0.314  -0.430 C2  KPR 10 
KPR N2  N1  N 0 1 N N N N N N 15.478 -32.477 -12.401 -4.638 -0.742 -0.274 N2  KPR 11 
KPR C1  C5  C 0 1 N N N N N N 15.494 -30.182 -13.118 -3.981 1.495  0.475  C1  KPR 12 
KPR H1  H1  H 0 1 N N N N N N 8.916  -28.379 -9.322  2.855  -1.302 -1.681 H1  KPR 13 
KPR H2  H2  H 0 1 N N N N N N 8.011  -31.728 -10.771 4.700  0.711  -0.097 H2  KPR 14 
KPR H3  H3  H 0 1 N N N N N N 10.837 -31.732 -12.184 0.179  -0.933 0.490  H3  KPR 15 
KPR H4  H4  H 0 1 N N N N N N 12.684 -29.287 -12.031 -1.186 1.404  -0.953 H4  KPR 16 
KPR H5  H5  H 0 1 N N N N N N 14.952 -30.874 -11.149 -3.606 0.645  -1.468 H5  KPR 17 
KPR H6  H6  H 0 1 N N N N N N 15.061 -33.163 -11.805 -4.463 -1.506 -0.909 H6  KPR 18 
KPR H7  H7  H 0 1 N N N N N N 15.368 -32.754 -13.355 -4.677 -1.066 0.680  H7  KPR 19 
KPR H9  H9  H 0 1 N N N N N N 16.560 -30.092 -12.862 -3.232 2.279  0.359  H9  KPR 20 
KPR H10 H10 H 0 1 N N N N N N 15.395 -30.516 -14.161 -4.960 1.886  0.197  H10 KPR 21 
KPR H11 H11 H 0 1 N N N N N N 15.004 -29.204 -12.998 -4.003 1.164  1.513  H11 KPR 22 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
KPR C1  C2  SING N N 1  
KPR O3  C3  DOUB N N 2  
KPR C3  C2  SING N N 3  
KPR C3  C4  SING N N 4  
KPR N2  C2  SING N N 5  
KPR C4  C5  DOUB N E 6  
KPR C5  O5  SING N N 7  
KPR O5  P   SING N N 8  
KPR O1P P   DOUB N N 9  
KPR P   O2P SING N N 10 
KPR P   O3P SING N N 11 
KPR O3P H1  SING N N 12 
KPR O2P H2  SING N N 13 
KPR C5  H3  SING N N 14 
KPR C4  H4  SING N N 15 
KPR C2  H5  SING N N 16 
KPR N2  H6  SING N N 17 
KPR N2  H7  SING N N 18 
KPR C1  H9  SING N N 19 
KPR C1  H10 SING N N 20 
KPR C1  H11 SING N N 21 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
KPR InChI            InChI                1.03  "InChI=1S/C5H10NO5P/c1-4(6)5(7)2-3-11-12(8,9)10/h2-4H,6H2,1H3,(H2,8,9,10)/b3-2+/t4-/m0/s1" 
KPR InChIKey         InChI                1.03  RTVKPJRIOVZREZ-ZPYNKGFJSA-N                                                                
KPR SMILES_CANONICAL CACTVS               3.385 "C[C@H](N)C(=O)\C=C\O[P](O)(O)=O"                                                          
KPR SMILES           CACTVS               3.385 "C[CH](N)C(=O)C=CO[P](O)(O)=O"                                                             
KPR SMILES_CANONICAL "OpenEye OEToolkits" 2.0.5 "C[C@@H](C(=O)/C=C/OP(=O)(O)O)N"                                                           
KPR SMILES           "OpenEye OEToolkits" 2.0.5 "CC(C(=O)C=COP(=O)(O)O)N"                                                                  
# 
_pdbx_chem_comp_identifier.comp_id           KPR 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.5 
_pdbx_chem_comp_identifier.identifier        "[(~{E},4~{S})-4-azanyl-3-oxidanylidene-pent-1-enyl] dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
KPR "Create component" 2016-08-11 EBI  
KPR "Initial release"  2017-01-18 RCSB 
KPR "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            KPR 
_pdbx_chem_comp_pcm.modified_residue_id                LYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C1 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   NZ 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
