data_OGR
# 
_chem_comp.id                                    OGR 
_chem_comp.name                                  "7-cyclopentyl-N,N-dimethyl-2-{[5-(methylcarbamoyl)pyridin-2-yl]amino}-7H-pyrrolo[2,3-d]pyrimidine-6-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H25 N7 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-04-29 
_chem_comp.pdbx_modified_date                    2025-01-10 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        407.469 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     OGR 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7UUF 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
OGR N1    N1  N 0 1 N N N N N N -37.186 7.189  -6.975  5.580  -2.400 0.111  N1    OGR 1  
OGR N3    N2  N 0 1 Y N N N N N -37.219 0.479  -5.239  -0.845 -0.748 -0.188 N3    OGR 2  
OGR C5    C1  C 0 1 Y N N N N N -36.314 4.906  -6.360  3.662  -0.900 -0.052 C5    OGR 3  
OGR C6    C2  C 0 1 N N N N N N -36.065 6.340  -6.573  5.110  -1.143 -0.014 C6    OGR 4  
OGR C7    C3  C 0 1 Y N N N N N -36.819 1.625  -4.674  0.119  -1.650 -0.184 C7    OGR 5  
OGR C8    C4  C 0 1 Y N N N N N -36.661 2.832  -5.385  1.448  -1.213 -0.131 C8    OGR 6  
OGR C13   C5  C 0 1 N N N N N N -38.067 3.451  -10.859 2.708  3.705  0.869  C13   OGR 7  
OGR C15   C6  C 0 1 N N N N N N -35.866 3.520  -9.702  3.315  2.525  -1.155 C15   OGR 8  
OGR C1    C7  C 0 1 N N N N N N -39.920 -3.720 -14.601 -8.429 -2.328 0.089  C1    OGR 9  
OGR "C1'" C8  C 0 1 Y N N N N N -38.221 -1.160 -8.442  -2.930 0.997  -0.090 "C1'" OGR 10 
OGR C11   C9  C 0 1 N N N N N N -36.909 4.250  -8.843  3.753  1.632  0.024  C11   OGR 11 
OGR C12   C10 C 0 1 N N N N N N -38.292 3.860  -9.368  3.366  2.382  1.311  C12   OGR 12 
OGR C14   C11 C 0 1 N N N N N N -36.531 3.426  -11.111 3.269  3.952  -0.554 C14   OGR 13 
OGR C16   C12 C 0 1 Y N N N N N -36.949 2.707  -6.809  1.699  0.178  -0.082 C16   OGR 14 
OGR C18   C13 C 0 1 N N N N N N -37.050 8.638  -7.194  7.019  -2.656 0.023  C18   OGR 15 
OGR C19   C14 C 0 1 N N N N N N -38.550 6.612  -7.149  4.651  -3.509 0.340  C19   OGR 16 
OGR C2    C15 C 0 1 N N N N N N -39.376 -2.263 -12.562 -6.861 -0.463 0.080  C2    OGR 17 
OGR "C2'" C16 C 0 1 Y N N N N N -38.070 -0.273 -9.544  -3.973 1.914  0.015  "C2'" OGR 18 
OGR "C3'" C17 C 0 1 Y N N N N N -38.465 -0.695 -10.834 -5.264 1.459  0.072  "C3'" OGR 19 
OGR "C4'" C18 C 0 1 Y N N N N N -38.984 -1.937 -11.134 -5.488 0.075  0.022  "C4'" OGR 20 
OGR "C5'" C19 C 0 1 Y N N N N N -39.098 -2.784 -9.995  -4.394 -0.785 -0.084 "C5'" OGR 21 
OGR C9    C20 C 0 1 Y N N N N N -36.277 4.201  -5.148  2.702  -1.862 -0.110 C9    OGR 22 
OGR CAA   C21 C 0 1 Y N N N N N -37.461 0.433  -6.609  -0.571 0.551  -0.141 CAA   OGR 23 
OGR N2    N3  N 0 1 N N N N N N -39.518 -3.521 -13.168 -7.066 -1.794 0.031  N2    OGR 24 
OGR N6    N4  N 0 1 Y N N N N N -37.324 1.571  -7.387  0.667  1.014  -0.090 N6    OGR 25 
OGR N7    N5  N 0 1 Y N N N N N -36.739 3.956  -7.328  3.055  0.345  -0.035 N7    OGR 26 
OGR N9    N6  N 0 1 N N N N N N -37.851 -0.802 -7.110  -1.621 1.454  -0.147 N9    OGR 27 
OGR NAA   N7  N 0 1 Y N N N N N -38.727 -2.395 -8.730  -3.169 -0.307 -0.130 NAA   OGR 28 
OGR O6    O1  O 0 1 N N N N N N -34.971 6.885  -6.389  5.885  -0.209 -0.096 O6    OGR 29 
OGR OP3   O2  O 0 1 N N N N N N -39.614 -1.282 -13.296 -7.808 0.295  0.172  OP3   OGR 30 
OGR H1    H1  H 0 1 N N N N N N -36.606 1.625  -3.615  -0.113 -2.704 -0.222 H1    OGR 31 
OGR H2    H2  H 0 1 N N N N N N -38.545 4.184  -11.526 1.623  3.600  0.839  H2    OGR 32 
OGR H3    H3  H 0 1 N N N N N N -38.494 2.454  -11.044 2.993  4.516  1.539  H3    OGR 33 
OGR H4    H4  H 0 1 N N N N N N -35.661 2.517  -9.299  4.045  2.475  -1.963 H4    OGR 34 
OGR H5    H5  H 0 1 N N N N N N -34.929 4.094  -9.750  2.330  2.227  -1.514 H5    OGR 35 
OGR H6    H6  H 0 1 N N N N N N -39.958 -4.796 -14.826 -8.899 -2.023 1.024  H6    OGR 36 
OGR H7    H7  H 0 1 N N N N N N -40.912 -3.275 -14.769 -9.007 -1.941 -0.751 H7    OGR 37 
OGR H8    H8  H 0 1 N N N N N N -39.184 -3.234 -15.259 -8.395 -3.416 0.036  H8    OGR 38 
OGR H9    H9  H 0 1 N N N N N N -36.778 5.332  -8.994  4.831  1.473  -0.007 H9    OGR 39 
OGR H10   H10 H 0 1 N N N N N N -38.983 4.713  -9.303  4.257  2.588  1.905  H10   OGR 40 
OGR H11   H11 H 0 1 N N N N N N -38.698 3.014  -8.794  2.660  1.789  1.891  H11   OGR 41 
OGR H12   H12 H 0 1 N N N N N N -36.240 2.490  -11.610 2.598  4.591  -1.128 H12   OGR 42 
OGR H13   H13 H 0 1 N N N N N N -36.231 4.282  -11.734 4.268  4.383  -0.505 H13   OGR 43 
OGR H14   H14 H 0 1 N N N N N N -36.003 8.937  -7.036  7.462  -2.586 1.017  H14   OGR 44 
OGR H15   H15 H 0 1 N N N N N N -37.349 8.883  -8.224  7.187  -3.654 -0.380 H15   OGR 45 
OGR H16   H16 H 0 1 N N N N N N -37.696 9.178  -6.486  7.481  -1.917 -0.632 H16   OGR 46 
OGR H17   H17 H 0 1 N N N N N N -38.518 5.529  -6.959  4.264  -3.863 -0.616 H17   OGR 47 
OGR H18   H18 H 0 1 N N N N N N -39.243 7.088  -6.440  5.174  -4.322 0.844  H18   OGR 48 
OGR H19   H19 H 0 1 N N N N N N -38.896 6.793  -8.177  3.824  -3.168 0.963  H19   OGR 49 
OGR H20   H20 H 0 1 N N N N N N -37.657 0.714  -9.396  -3.767 2.973  0.052  H20   OGR 50 
OGR H21   H21 H 0 1 N N N N N N -38.352 0.008  -11.646 -6.090 2.150  0.154  H21   OGR 51 
OGR H22   H22 H 0 1 N N N N N N -39.495 -3.779 -10.132 -4.554 -1.853 -0.123 H22   OGR 52 
OGR H23   H23 H 0 1 N N N N N N -36.004 4.618  -4.190  2.869  -2.929 -0.137 H23   OGR 53 
OGR H24   H24 H 0 1 N N N N N N -39.341 -4.333 -12.612 -6.311 -2.398 -0.043 H24   OGR 54 
OGR H25   H25 H 0 1 N N N N N N -37.876 -1.547 -6.443  -1.442 2.406  -0.192 H25   OGR 55 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
OGR C1    N2    SING N N 1  
OGR OP3   C2    DOUB N N 2  
OGR N2    C2    SING N N 3  
OGR C2    "C4'" SING N N 4  
OGR "C4'" "C3'" DOUB Y N 5  
OGR "C4'" "C5'" SING Y N 6  
OGR C14   C13   SING N N 7  
OGR C14   C15   SING N N 8  
OGR C13   C12   SING N N 9  
OGR "C3'" "C2'" SING Y N 10 
OGR "C5'" NAA   DOUB Y N 11 
OGR C15   C11   SING N N 12 
OGR "C2'" "C1'" DOUB Y N 13 
OGR C12   C11   SING N N 14 
OGR C11   N7    SING N N 15 
OGR NAA   "C1'" SING Y N 16 
OGR "C1'" N9    SING N N 17 
OGR N6    C16   DOUB Y N 18 
OGR N6    CAA   SING Y N 19 
OGR N7    C16   SING Y N 20 
OGR N7    C5    SING Y N 21 
OGR C18   N1    SING N N 22 
OGR C19   N1    SING N N 23 
OGR N9    CAA   SING N N 24 
OGR N1    C6    SING N N 25 
OGR C16   C8    SING Y N 26 
OGR CAA   N3    DOUB Y N 27 
OGR C6    O6    DOUB N N 28 
OGR C6    C5    SING N N 29 
OGR C5    C9    DOUB Y N 30 
OGR C8    C9    SING Y N 31 
OGR C8    C7    DOUB Y N 32 
OGR N3    C7    SING Y N 33 
OGR C7    H1    SING N N 34 
OGR C13   H2    SING N N 35 
OGR C13   H3    SING N N 36 
OGR C15   H4    SING N N 37 
OGR C15   H5    SING N N 38 
OGR C1    H6    SING N N 39 
OGR C1    H7    SING N N 40 
OGR C1    H8    SING N N 41 
OGR C11   H9    SING N N 42 
OGR C12   H10   SING N N 43 
OGR C12   H11   SING N N 44 
OGR C14   H12   SING N N 45 
OGR C14   H13   SING N N 46 
OGR C18   H14   SING N N 47 
OGR C18   H15   SING N N 48 
OGR C18   H16   SING N N 49 
OGR C19   H17   SING N N 50 
OGR C19   H18   SING N N 51 
OGR C19   H19   SING N N 52 
OGR "C2'" H20   SING N N 53 
OGR "C3'" H21   SING N N 54 
OGR "C5'" H22   SING N N 55 
OGR C9    H23   SING N N 56 
OGR N2    H24   SING N N 57 
OGR N9    H25   SING N N 58 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
OGR SMILES           ACDLabs              12.01 "CNC(=O)c1ccc(nc1)Nc1ncc2cc(C(=O)N(C)C)n(c2n1)C1CCCC1"                                                                                                             
OGR InChI            InChI                1.03  "InChI=1S/C21H25N7O2/c1-22-19(29)13-8-9-17(23-11-13)25-21-24-12-14-10-16(20(30)27(2)3)28(18(14)26-21)15-6-4-5-7-15/h8-12,15H,4-7H2,1-3H3,(H,22,29)(H,23,24,25,26)" 
OGR InChIKey         InChI                1.03  ZWAGHYMVHPAUMT-UHFFFAOYSA-N                                                                                                                                        
OGR SMILES_CANONICAL CACTVS               3.385 "CNC(=O)c1ccc(Nc2ncc3cc(n(C4CCCC4)c3n2)C(=O)N(C)C)nc1"                                                                                                             
OGR SMILES           CACTVS               3.385 "CNC(=O)c1ccc(Nc2ncc3cc(n(C4CCCC4)c3n2)C(=O)N(C)C)nc1"                                                                                                             
OGR SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CNC(=O)c1ccc(nc1)Nc2ncc3cc(n(c3n2)C4CCCC4)C(=O)N(C)C"                                                                                                             
OGR SMILES           "OpenEye OEToolkits" 2.0.7 "CNC(=O)c1ccc(nc1)Nc2ncc3cc(n(c3n2)C4CCCC4)C(=O)N(C)C"                                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
OGR "SYSTEMATIC NAME" ACDLabs              12.01 "7-cyclopentyl-N,N-dimethyl-2-{[5-(methylcarbamoyl)pyridin-2-yl]amino}-7H-pyrrolo[2,3-d]pyrimidine-6-carboxamide"   
OGR "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "7-cyclopentyl-~{N},~{N}-dimethyl-2-[[5-(methylcarbamoyl)pyridin-2-yl]amino]pyrrolo[2,3-d]pyrimidine-6-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
OGR "Create component" 2022-04-29 RCSB 
OGR "Initial release"  2025-01-15 RCSB 
# 
