data_YYR
#

_chem_comp.id                                   YYR
_chem_comp.name                                 "2-(acetylamino)-1,5-anhydro-2-deoxy-D-mannitol"
_chem_comp.type                                 SACCHARIDE
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C8 H15 N O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2012-12-18
_chem_comp.pdbx_modified_date                   2019-11-20
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  OBS
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       205.208
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    YYR
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2VLC
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YYR  C1    C1    C  0  1  N  N  N  -7.046  -1.822  34.921  -0.197  -0.888  -1.415  C1    YYR   1  
YYR  C2    C2    C  0  1  N  N  R  -6.188  -3.067  34.995  -0.935   0.342  -0.881  C2    YYR   2  
YYR  C21   C21   C  0  1  N  N  N  -6.571  -5.192  33.673  -2.834  -0.561   0.349  C21   YYR   3  
YYR  C2M   C2M   C  0  1  N  N  N  -5.614  -5.918  32.778  -3.528  -0.912   1.640  C2M   YYR   4  
YYR  C3    C3    C  0  1  N  N  R  -4.726  -2.641  35.194   0.077   1.465  -0.630  C3    YYR   5  
YYR  C4    C4    C  0  1  N  N  S  -4.357  -1.135  35.065   1.150   0.963   0.342  C4    YYR   6  
YYR  C5    C5    C  0  1  N  N  R  -5.287  -0.429  34.047   1.807  -0.291  -0.240  C5    YYR   7  
YYR  C6    C6    C  0  1  N  N  N  -4.630  -0.395  32.664   2.838  -0.833   0.751  C6    YYR   8  
YYR  N2    N2    N  0  1  N  N  N  -6.412  -3.854  33.774  -1.610   0.001   0.374  N2    YYR   9  
YYR  O21   O21   O  0  1  N  N  N  -7.439  -5.831  34.238  -3.377  -0.785  -0.712  O21   YYR  10  
YYR  O3    O3    O  0  1  N  N  N  -4.000  -3.332  34.177  -0.593   2.593  -0.062  O3    YYR  11  
YYR  O4    O4    O  0  1  N  N  N  -4.173  -0.428  36.341   2.138   1.979   0.528  O4    YYR  12  
YYR  O5    O5    O  0  1  N  N  N  -6.566  -1.044  33.832   0.807  -1.284  -0.479  O5    YYR  13  
YYR  O6    O6    O  0  1  N  N  N  -5.375   0.467  31.790   3.533  -1.934   0.161  O6    YYR  14  
YYR  H11   H11   H  0  1  N  N  N  -8.097  -2.098  34.752  -0.905  -1.704  -1.556  H11   YYR  15  
YYR  H12   H12   H  0  1  N  N  N  -6.963  -1.251  35.857   0.271  -0.645  -2.369  H12   YYR  16  
YYR  H2    H2    H  0  1  N  N  N  -6.499  -3.658  35.869  -1.671   0.672  -1.614  H2    YYR  17  
YYR  H2M1  H2M1  H  0  0  N  N  N  -5.690  -5.516  31.757  -4.178  -1.772   1.481  H2M1  YYR  18  
YYR  H2M2  H2M2  H  0  0  N  N  N  -4.588  -5.781  33.150  -2.784  -1.153   2.399  H2M2  YYR  19  
YYR  H2M3  H2M3  H  0  0  N  N  N  -5.861  -6.990  32.769  -4.125  -0.063   1.974  H2M3  YYR  20  
YYR  H2N   H2N   H  0  1  N  N  N  -6.451  -3.339  32.918  -1.175   0.181   1.222  H2N   YYR  21  
YYR  H3    H3    H  0  1  N  N  N  -4.398  -2.988  36.185   0.543   1.753  -1.572  H3    YYR  22  
YYR  H3O   H3O   H  0  1  N  N  N  -3.078  -3.113  34.241  -0.011   3.343   0.124  H3O   YYR  23  
YYR  H4    H4    H  0  1  N  N  N  -3.368  -1.133  34.584   0.689   0.722   1.300  H4    YYR  24  
YYR  H4O   H4O   H  0  1  N  N  N  -3.951   0.480  36.171   2.849   1.728   1.133  H4O   YYR  25  
YYR  H5    H5    H  0  1  N  N  N  -5.432   0.608  34.383   2.301  -0.040  -1.179  H5    YYR  26  
YYR  H61   H61   H  0  1  N  N  N  -3.601  -0.018  32.758   3.550  -0.046   1.002  H61   YYR  27  
YYR  H62   H62   H  0  1  N  N  N  -4.611  -1.412  32.244   2.332  -1.167   1.657  H62   YYR  28  
YYR  H6O   H6O   H  0  1  N  N  N  -4.963   0.484  30.934   4.205  -2.328   0.735  H6O   YYR  29  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YYR  C1   C2    SING  N  N   1  
YYR  C1   O5    SING  N  N   2  
YYR  C1   H11   SING  N  N   3  
YYR  C1   H12   SING  N  N   4  
YYR  C2   C3    SING  N  N   5  
YYR  C2   N2    SING  N  N   6  
YYR  C2   H2    SING  N  N   7  
YYR  C21  N2    SING  N  N   8  
YYR  C21  O21   DOUB  N  N   9  
YYR  C21  C2M   SING  N  N  10  
YYR  C2M  H2M3  SING  N  N  11  
YYR  C2M  H2M1  SING  N  N  12  
YYR  C2M  H2M2  SING  N  N  13  
YYR  C3   C4    SING  N  N  14  
YYR  C3   O3    SING  N  N  15  
YYR  C3   H3    SING  N  N  16  
YYR  C4   H4    SING  N  N  17  
YYR  C4   O4    SING  N  N  18  
YYR  C4   C5    SING  N  N  19  
YYR  C5   H5    SING  N  N  20  
YYR  C5   O5    SING  N  N  21  
YYR  C5   C6    SING  N  N  22  
YYR  C6   H61   SING  N  N  23  
YYR  C6   H62   SING  N  N  24  
YYR  C6   O6    SING  N  N  25  
YYR  N2   H2N   SING  N  N  26  
YYR  O3   H3O   SING  N  N  27  
YYR  O4   H4O   SING  N  N  28  
YYR  O6   H6O   SING  N  N  29  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YYR  SMILES            ACDLabs               12.01  "O=C(NC1C(O)C(O)C(OC1)CO)C"  
YYR  InChI             InChI                 1.03   "InChI=1S/C8H15NO5/c1-4(11)9-5-3-14-6(2-10)8(13)7(5)12/h5-8,10,12-13H,2-3H2,1H3,(H,9,11)/t5-,6-,7-,8-/m1/s1"  
YYR  InChIKey          InChI                 1.03   VCYYRDKGHLOTQU-WCTZXXKLSA-N  
YYR  SMILES_CANONICAL  CACTVS                3.370  "CC(=O)N[C@@H]1CO[C@H](CO)[C@@H](O)[C@@H]1O"  
YYR  SMILES            CACTVS                3.370  "CC(=O)N[CH]1CO[CH](CO)[CH](O)[CH]1O"  
YYR  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "CC(=O)N[C@@H]1CO[C@@H]([C@H]([C@@H]1O)O)CO"  
YYR  SMILES            "OpenEye OEToolkits"  1.7.6  "CC(=O)NC1COC(C(C1O)O)CO"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
YYR  "SYSTEMATIC NAME"  ACDLabs               12.01  "2-(acetylamino)-1,5-anhydro-2-deoxy-D-mannitol"  
YYR  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "N-[(3R,4R,5S,6R)-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]ethanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YYR  "Create component"    2012-12-18  RCSB  
YYR  "Modify atom id"      2013-02-12  RCSB  
YYR  "Initial release"     2019-11-20  RCSB  
YYR  "Obsolete component"  2019-11-20  PDBE  
##
