data_4LS
#

_chem_comp.id                                   4LS
_chem_comp.name                                 
;1-deoxy-1-[7,8-dimethyl-5-(3-methylbut-2-en-1-yl)-2,4-dioxo-1,3,4,5-tetrahydrobenzo[g]pteridin-10(2H)-yl]-5-O-phosphono
-D-ribitol
;

_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C22 H31 N4 O9 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "dimethylallyl FMN"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2015-04-14
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       526.477
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    4LS
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4ZAZ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
4LS  C4A  C1   C  0  1  N  N  N   -5.651  29.438  11.374  -2.915   1.447   0.017  C4A  4LS   1  
4LS  CAA  C2   C  0  1  N  N  N   -3.526  32.724  14.892  -6.474  -1.637   2.291  CAA  4LS   2  
4LS  CAC  C3   C  0  1  N  N  N   -9.170  32.399  15.760  -1.327  -4.613  -1.579  CAC  4LS   3  
4LS  CAD  C4   C  0  1  N  N  N   -7.495  34.398  14.343  -3.758  -4.661  -0.030  CAD  4LS   4  
4LS  OAL  O1   O  0  1  N  N  N  -12.964  24.283  10.827   8.074   0.966  -0.008  OAL  4LS   5  
4LS  PBK  P1   P  0  1  N  N  N  -13.600  25.237  11.813   7.610  -0.284   0.634  PBK  4LS   6  
4LS  OAM  O2   O  0  1  N  N  N  -14.966  24.715  12.301   7.984  -1.540  -0.302  OAM  4LS   7  
4LS  OAH  O3   O  0  1  N  N  N  -13.695  26.653  11.319   8.328  -0.451   2.066  OAH  4LS   8  
4LS  OAV  O4   O  0  1  N  N  N  -12.710  25.184  13.133   6.014  -0.223   0.838  OAV  4LS   9  
4LS  CAR  C5   C  0  1  N  N  N  -11.331  25.585  13.080   5.102   0.025  -0.234  CAR  4LS  10  
4LS  CBF  C6   C  0  1  N  N  R  -10.766  25.627  14.490   3.670   0.017   0.304  CBF  4LS  11  
4LS  OAI  O5   O  0  1  N  N  N  -11.110  24.507  15.239   3.494   1.108   1.210  OAI  4LS  12  
4LS  CBH  C7   C  0  1  N  N  S   -9.385  26.098  14.578   2.687   0.158  -0.861  CBH  4LS  13  
4LS  OAK  O6   O  0  1  N  N  N   -8.545  24.947  14.503   2.862  -0.933  -1.767  OAK  4LS  14  
4LS  CBG  C8   C  0  1  N  N  S   -8.930  27.276  13.855   1.255   0.150  -0.323  CBG  4LS  15  
4LS  OAJ  O7   O  0  1  N  N  N   -9.927  28.225  13.700   1.079   1.241   0.583  OAJ  4LS  16  
4LS  CAS  C9   C  0  1  N  N  N   -7.521  27.756  14.085   0.272   0.291  -1.487  CAS  4LS  17  
4LS  N10  N1   N  0  1  N  N  N   -6.983  28.802  13.231  -1.100   0.270  -0.974  N10  4LS  18  
4LS  C9A  C10  C  0  1  Y  N  N   -7.167  30.153  13.549  -1.749  -0.954  -0.746  C9A  4LS  19  
4LS  C9   C11  C  0  1  Y  N  N   -8.073  30.615  14.491  -1.234  -2.131  -1.257  C9   4LS  20  
4LS  C8   C12  C  0  1  Y  N  N   -8.201  32.003  14.783  -1.888  -3.330  -1.022  C8   4LS  21  
4LS  C7   C13  C  0  1  Y  N  N   -7.409  32.942  14.059  -3.053  -3.353  -0.280  C7   4LS  22  
4LS  C6   C14  C  0  1  Y  N  N   -6.555  32.445  13.091  -3.576  -2.178   0.234  C6   4LS  23  
4LS  C5A  C15  C  0  1  Y  N  N   -6.413  31.090  12.856  -2.927  -0.978   0.003  C5A  4LS  24  
4LS  N5   N2   N  0  1  N  N  N   -5.481  30.720  11.935  -3.440   0.226   0.509  N5   4LS  25  
4LS  CAQ  C16  C  0  1  N  N  N   -4.050  30.911  12.393  -4.495   0.221   1.525  CAQ  4LS  26  
4LS  CAN  C17  C  0  1  N  N  N   -3.993  30.402  13.835  -5.842   0.230   0.850  CAN  4LS  27  
4LS  CAW  C18  C  0  1  N  N  N   -3.903  31.290  14.965  -6.738  -0.673   1.163  CAW  4LS  28  
4LS  CAB  C19  C  0  1  N  N  N   -4.216  30.702  16.302  -8.033  -0.748   0.395  CAB  4LS  29  
4LS  C11  C20  C  0  1  N  N  N   -6.386  28.486  12.075  -1.760   1.451  -0.714  C11  4LS  30  
4LS  N1   N3   N  0  1  N  N  N   -6.538  27.218  11.528  -1.265   2.644  -1.185  N1   4LS  31  
4LS  C2   C21  C  0  1  N  N  N   -5.974  26.930  10.312  -1.913   3.795  -0.927  C2   4LS  32  
4LS  O2   O8   O  0  1  N  N  N   -6.171  25.780   9.813  -1.462   4.842  -1.351  O2   4LS  33  
4LS  N3   N4   N  0  1  N  N  N   -5.325  27.887   9.672  -3.050   3.809  -0.208  N3   4LS  34  
4LS  C4   C22  C  0  1  N  N  N   -5.134  29.133  10.123  -3.575   2.661   0.268  C4   4LS  35  
4LS  O4   O9   O  0  1  N  N  N   -4.577  29.979   9.377  -4.606   2.679   0.919  O4   4LS  36  
4LS  H2   H2   H  0  1  N  N  N   -3.538  33.159  15.902  -5.907  -1.134   3.074  H2   4LS  37  
4LS  H3   H3   H  0  1  N  N  N   -2.516  32.816  14.465  -7.422  -1.989   2.697  H3   4LS  38  
4LS  H4   H4   H  0  1  N  N  N   -4.244  33.260  14.254  -5.902  -2.486   1.916  H4   4LS  39  
4LS  H5   H5   H  0  1  N  N  N  -10.139  32.570  15.268  -0.642  -5.054  -0.855  H5   4LS  40  
4LS  H6   H6   H  0  1  N  N  N   -9.277  31.605  16.513  -2.141  -5.309  -1.779  H6   4LS  41  
4LS  H7   H7   H  0  1  N  N  N   -8.839  33.327  16.250  -0.791  -4.404  -2.505  H7   4LS  42  
4LS  H8   H8   H  0  1  N  N  N   -8.269  34.851  13.706  -3.378  -5.109   0.889  H8   4LS  43  
4LS  H9   H9   H  0  1  N  N  N   -7.756  34.550  15.401  -4.829  -4.484   0.068  H9   4LS  44  
4LS  H10  H10  H  0  1  N  N  N   -6.524  34.870  14.133  -3.576  -5.338  -0.865  H10  4LS  45  
4LS  H11  H11  H  0  1  N  N  N  -15.154  23.882  11.885   7.709  -2.394   0.057  H11  4LS  46  
4LS  H12  H12  H  0  1  N  N  N  -13.328  26.709  10.445   9.293  -0.495   2.019  H12  4LS  47  
4LS  H13  H13  H  0  1  N  N  N  -10.761  24.863  12.477   5.318   0.998  -0.677  H13  4LS  48  
4LS  H14  H14  H  0  1  N  N  N  -11.256  26.583  12.624   5.210  -0.751  -0.991  H14  4LS  49  
4LS  H15  H15  H  0  1  N  N  N  -11.339  26.442  14.956   3.483  -0.922   0.825  H15  4LS  50  
4LS  H16  H16  H  0  1  N  N  N  -10.735  24.580  16.109   3.645   1.977   0.813  H16  4LS  51  
4LS  H17  H17  H  0  1  N  N  N   -9.297  26.405  15.631   2.874   1.097  -1.382  H17  4LS  52  
4LS  H18  H18  H  0  1  N  N  N   -8.931  24.239  15.006   2.711  -1.801  -1.370  H18  4LS  53  
4LS  H19  H19  H  0  1  N  N  N   -8.845  26.876  12.834   1.068  -0.789   0.198  H19  4LS  54  
4LS  H20  H20  H  0  1  N  N  N  -10.760  27.790  13.563   1.172   2.112   0.172  H20  4LS  55  
4LS  H21  H21  H  0  1  N  N  N   -6.862  26.882  13.978   0.453   1.235  -2.003  H21  4LS  56  
4LS  H22  H22  H  0  1  N  N  N   -7.472  28.128  15.119   0.412  -0.536  -2.184  H22  4LS  57  
4LS  H23  H23  H  0  1  N  N  N   -8.696  29.906  15.016  -0.323  -2.117  -1.838  H23  4LS  58  
4LS  H24  H24  H  0  1  N  N  N   -5.979  33.140  12.498  -4.487  -2.198   0.813  H24  4LS  59  
4LS  H25  H25  H  0  1  N  N  N   -3.365  30.332  11.756  -4.403  -0.675   2.140  H25  4LS  60  
4LS  H26  H26  H  0  1  N  N  N   -3.775  31.975  12.353  -4.398   1.105   2.154  H26  4LS  61  
4LS  H27  H27  H  0  1  N  N  N   -4.021  29.337  14.012  -6.069   0.981   0.108  H27  4LS  62  
4LS  H30  H30  H  0  1  N  N  N   -4.112  31.476  17.077  -8.776  -0.109   0.873  H30  4LS  63  
4LS  H31  H31  H  0  1  N  N  N   -5.247  30.320  16.302  -7.868  -0.412  -0.628  H31  4LS  64  
4LS  H32  H32  H  0  1  N  N  N   -3.519  29.877  16.512  -8.391  -1.778   0.386  H32  4LS  65  
4LS  H33  H33  H  0  1  N  N  N   -4.944  27.661   8.775  -3.501   4.650  -0.039  H33  4LS  66  
4LS  H1   H1   H  0  1  N  N  N   -7.057  26.518  12.019  -0.445   2.656  -1.704  H1   4LS  67  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
4LS  O4   C4   DOUB  N  N   1  
4LS  N3   C4   SING  N  N   2  
4LS  N3   C2   SING  N  N   3  
4LS  O2   C2   DOUB  N  N   4  
4LS  C4   C4A  SING  N  N   5  
4LS  C2   N1   SING  N  N   6  
4LS  OAL  PBK  DOUB  N  N   7  
4LS  OAH  PBK  SING  N  N   8  
4LS  C4A  N5   SING  N  N   9  
4LS  C4A  C11  DOUB  N  N  10  
4LS  N1   C11  SING  N  N  11  
4LS  PBK  OAM  SING  N  N  12  
4LS  PBK  OAV  SING  N  N  13  
4LS  N5   CAQ  SING  N  N  14  
4LS  N5   C5A  SING  N  N  15  
4LS  C11  N10  SING  N  N  16  
4LS  CAQ  CAN  SING  N  N  17  
4LS  C5A  C6   DOUB  Y  N  18  
4LS  C5A  C9A  SING  Y  N  19  
4LS  CAR  OAV  SING  N  N  20  
4LS  CAR  CBF  SING  N  N  21  
4LS  C6   C7   SING  Y  N  22  
4LS  N10  C9A  SING  N  N  23  
4LS  N10  CAS  SING  N  N  24  
4LS  C9A  C9   DOUB  Y  N  25  
4LS  OAJ  CBG  SING  N  N  26  
4LS  CAN  CAW  DOUB  N  N  27  
4LS  CBG  CAS  SING  N  N  28  
4LS  CBG  CBH  SING  N  N  29  
4LS  C7   CAD  SING  N  N  30  
4LS  C7   C8   DOUB  Y  N  31  
4LS  CBF  CBH  SING  N  N  32  
4LS  CBF  OAI  SING  N  N  33  
4LS  C9   C8   SING  Y  N  34  
4LS  OAK  CBH  SING  N  N  35  
4LS  C8   CAC  SING  N  N  36  
4LS  CAA  CAW  SING  N  N  37  
4LS  CAW  CAB  SING  N  N  38  
4LS  CAA  H2   SING  N  N  39  
4LS  CAA  H3   SING  N  N  40  
4LS  CAA  H4   SING  N  N  41  
4LS  CAC  H5   SING  N  N  42  
4LS  CAC  H6   SING  N  N  43  
4LS  CAC  H7   SING  N  N  44  
4LS  CAD  H8   SING  N  N  45  
4LS  CAD  H9   SING  N  N  46  
4LS  CAD  H10  SING  N  N  47  
4LS  OAM  H11  SING  N  N  48  
4LS  OAH  H12  SING  N  N  49  
4LS  CAR  H13  SING  N  N  50  
4LS  CAR  H14  SING  N  N  51  
4LS  CBF  H15  SING  N  N  52  
4LS  OAI  H16  SING  N  N  53  
4LS  CBH  H17  SING  N  N  54  
4LS  OAK  H18  SING  N  N  55  
4LS  CBG  H19  SING  N  N  56  
4LS  OAJ  H20  SING  N  N  57  
4LS  CAS  H21  SING  N  N  58  
4LS  CAS  H22  SING  N  N  59  
4LS  C9   H23  SING  N  N  60  
4LS  C6   H24  SING  N  N  61  
4LS  CAQ  H25  SING  N  N  62  
4LS  CAQ  H26  SING  N  N  63  
4LS  CAN  H27  SING  N  N  64  
4LS  CAB  H30  SING  N  N  65  
4LS  CAB  H31  SING  N  N  66  
4LS  CAB  H32  SING  N  N  67  
4LS  N3   H33  SING  N  N  68  
4LS  N1   H1   SING  N  N  69  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
4LS  SMILES            ACDLabs               12.01  "C=12N(c3c(N(CC(C(C(COP(=O)(O)O)O)O)O)C=1NC(=O)NC2=O)cc(C)c(C)c3)C\C=C(/C)C"  
4LS  InChI             InChI                 1.03   "InChI=1S/C22H31N4O9P/c1-11(2)5-6-25-14-7-12(3)13(4)8-15(14)26(20-18(25)21(30)24-22(31)23-20)9-16(27)19(29)17(28)10-35-36(32,33)34/h5,7-8,16-17,19,27-29H,6,9-10H2,1-4H3,(H2,32,33,34)(H2,23,24,30,31)/t16-,17+,19-/m0/s1"  
4LS  InChIKey          InChI                 1.03   BJBVBUWJZZTUOU-SCTDSRPQSA-N  
4LS  SMILES_CANONICAL  CACTVS                3.385  "CC(C)=CCN1c2cc(C)c(C)cc2N(C[C@H](O)[C@H](O)[C@H](O)CO[P](O)(O)=O)C3=C1C(=O)NC(=O)N3"  
4LS  SMILES            CACTVS                3.385  "CC(C)=CCN1c2cc(C)c(C)cc2N(C[CH](O)[CH](O)[CH](O)CO[P](O)(O)=O)C3=C1C(=O)NC(=O)N3"  
4LS  SMILES_CANONICAL  "OpenEye OEToolkits"  1.9.2  "Cc1cc2c(cc1C)N(C3=C(N2CC=C(C)C)C(=O)NC(=O)N3)C[C@@H]([C@@H]([C@@H](COP(=O)(O)O)O)O)O"  
4LS  SMILES            "OpenEye OEToolkits"  1.9.2  "Cc1cc2c(cc1C)N(C3=C(N2CC=C(C)C)C(=O)NC(=O)N3)CC(C(C(COP(=O)(O)O)O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
4LS  "SYSTEMATIC NAME"  ACDLabs               12.01  "1-deoxy-1-[7,8-dimethyl-5-(3-methylbut-2-en-1-yl)-2,4-dioxo-1,3,4,5-tetrahydrobenzo[g]pteridin-10(2H)-yl]-5-O-phosphono-D-ribitol"  
4LS  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.9.2  "[(2R,3S,4S)-5-[7,8-dimethyl-5-(3-methylbut-2-enyl)-2,4-bis(oxidanylidene)-1H-benzo[g]pteridin-10-yl]-2,3,4-tris(oxidanyl)pentyl] dihydrogen phosphate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
4LS  "Create component"  2015-04-14  EBI   
4LS  "Initial release"   2015-06-17  RCSB  
4LS  "Modify synonyms"   2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     4LS
_pdbx_chem_comp_synonyms.name        "dimethylallyl FMN"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
