data_6MS
#

_chem_comp.id                                   6MS
_chem_comp.name                                 "[6-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)hexyl]phosphonic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C11 H18 N5 O4 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        9-[7-(phosphonoheptyl]guanine
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2016-05-09
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       315.265
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    ?
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5JSQ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
6MS  C12  C1   C  0  1  N  N  N  40.826  22.828  40.916   1.272   1.111  -1.149  C12  6MS   1  
6MS  P18  P1   P  0  1  N  N  N  40.650  30.202  39.745  -6.225  -0.290   0.147  P18  6MS   2  
6MS  O01  O1   O  0  1  N  N  N  42.807  21.508  46.395   6.716   0.388   1.088  O01  6MS   3  
6MS  C02  C2   C  0  1  N  N  N  41.969  21.548  45.523   5.703  -0.071   0.589  C02  6MS   4  
6MS  N03  N1   N  0  1  N  N  N  40.735  20.977  45.789   5.588  -1.396   0.352  N03  6MS   5  
6MS  C04  C3   C  0  1  N  N  N  39.698  20.971  44.834   4.451  -1.899  -0.207  C04  6MS   6  
6MS  N05  N2   N  0  1  N  N  N  38.516  20.373  45.220   4.362  -3.250  -0.436  N05  6MS   7  
6MS  N06  N3   N  0  1  N  N  N  39.875  21.523  43.530   3.437  -1.129  -0.532  N06  6MS   8  
6MS  C07  C4   C  0  1  Y  N  N  41.155  22.085  43.232   3.479   0.193  -0.327  C07  6MS   9  
6MS  C08  C5   C  0  1  Y  N  N  42.193  22.129  44.159   4.618   0.769   0.248  C08  6MS  10  
6MS  N09  N4   N  0  1  Y  N  N  43.253  22.761  43.566   4.391   2.103   0.339  N09  6MS  11  
6MS  C10  C6   C  0  1  Y  N  N  42.878  23.078  42.324   3.211   2.372  -0.136  C10  6MS  12  
6MS  N11  N5   N  0  1  Y  N  N  41.632  22.679  42.115   2.607   1.222  -0.555  N11  6MS  13  
6MS  C13  C7   C  0  1  N  N  N  39.826  24.007  41.137   0.256   0.768  -0.058  C13  6MS  14  
6MS  C14  C8   C  0  1  N  N  N  39.962  25.076  40.029  -1.138   0.651  -0.677  C14  6MS  15  
6MS  C15  C9   C  0  1  N  N  N  39.194  26.369  40.347  -2.154   0.308   0.414  C15  6MS  16  
6MS  C16  C10  C  0  1  N  N  N  40.089  27.571  40.010  -3.548   0.192  -0.206  C16  6MS  17  
6MS  C17  C11  C  0  1  N  N  N  39.444  28.917  40.203  -4.564  -0.152   0.885  C17  6MS  18  
6MS  O19  O2   O  0  1  N  N  N  41.797  30.174  40.729  -6.681   1.145  -0.422  O19  6MS  19  
6MS  O20  O3   O  0  1  N  N  N  41.156  29.917  38.352  -6.193  -1.272  -0.960  O20  6MS  20  
6MS  O21  O4   O  0  1  N  N  N  40.005  31.570  39.740  -7.272  -0.779   1.268  O21  6MS  21  
6MS  H1   H1   H  0  1  N  N  N  40.269  21.899  40.725   1.000   2.060  -1.612  H1   6MS  22  
6MS  H2   H2   H  0  1  N  N  N  41.476  23.049  40.056   1.274   0.325  -1.904  H2   6MS  23  
6MS  H3   H3   H  0  1  N  N  N  37.751  20.317  44.578   5.101  -3.831  -0.200  H3   6MS  24  
6MS  H4   H4   H  0  1  N  N  N  38.424  19.996  46.142   3.559  -3.622  -0.833  H4   6MS  25  
6MS  H6   H6   H  0  1  N  N  N  43.498  23.584  41.599   2.772   3.358  -0.186  H6   6MS  26  
6MS  H7   H7   H  0  1  N  N  N  40.032  24.473  42.112   0.527  -0.181   0.406  H7   6MS  27  
6MS  H8   H8   H  0  1  N  N  N  38.799  23.612  41.129   0.254   1.554   0.697  H8   6MS  28  
6MS  H9   H9   H  0  1  N  N  N  39.572  24.659  39.089  -1.410   1.600  -1.141  H9   6MS  29  
6MS  H10  H10  H  0  1  N  N  N  41.027  25.322  39.907  -1.136  -0.135  -1.432  H10  6MS  30  
6MS  H11  H11  H  0  1  N  N  N  38.932  26.391  41.415  -1.883  -0.640   0.878  H11  6MS  31  
6MS  H12  H12  H  0  1  N  N  N  38.275  26.411  39.744  -2.157   1.094   1.169  H12  6MS  32  
6MS  H13  H13  H  0  1  N  N  N  40.393  27.486  38.956  -3.820   1.140  -0.669  H13  6MS  33  
6MS  H14  H14  H  0  1  N  N  N  40.980  27.524  40.653  -3.546  -0.594  -0.961  H14  6MS  34  
6MS  H15  H15  H  0  1  N  N  N  39.151  29.041  41.256  -4.567   0.634   1.640  H15  6MS  35  
6MS  H16  H16  H  0  1  N  N  N  38.554  28.998  39.562  -4.293  -1.100   1.349  H16  6MS  36  
6MS  H17  H17  H  0  1  N  N  N  42.605  29.982  40.268  -6.724   1.839   0.250  H17  6MS  37  
6MS  H18  H18  H  0  1  N  N  N  40.061  31.944  38.868  -8.178  -0.875   0.945  H18  6MS  38  
6MS  H5   H5   H  0  1  N  N  N  40.576  20.558  46.683   6.318  -1.993   0.581  H5   6MS  39  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
6MS  O20  P18  DOUB  N  N   1  
6MS  O21  P18  SING  N  N   2  
6MS  P18  C17  SING  N  N   3  
6MS  P18  O19  SING  N  N   4  
6MS  C16  C17  SING  N  N   5  
6MS  C16  C15  SING  N  N   6  
6MS  C14  C15  SING  N  N   7  
6MS  C14  C13  SING  N  N   8  
6MS  C12  C13  SING  N  N   9  
6MS  C12  N11  SING  N  N  10  
6MS  N11  C10  SING  Y  N  11  
6MS  N11  C07  SING  Y  N  12  
6MS  C10  N09  DOUB  Y  N  13  
6MS  C07  N06  SING  N  N  14  
6MS  C07  C08  DOUB  Y  N  15  
6MS  N06  C04  DOUB  N  N  16  
6MS  N09  C08  SING  Y  N  17  
6MS  C08  C02  SING  N  N  18  
6MS  C04  N05  SING  N  N  19  
6MS  C04  N03  SING  N  N  20  
6MS  C02  N03  SING  N  N  21  
6MS  C02  O01  DOUB  N  N  22  
6MS  C12  H1   SING  N  N  23  
6MS  C12  H2   SING  N  N  24  
6MS  N05  H3   SING  N  N  25  
6MS  N05  H4   SING  N  N  26  
6MS  C10  H6   SING  N  N  27  
6MS  C13  H7   SING  N  N  28  
6MS  C13  H8   SING  N  N  29  
6MS  C14  H9   SING  N  N  30  
6MS  C14  H10  SING  N  N  31  
6MS  C15  H11  SING  N  N  32  
6MS  C15  H12  SING  N  N  33  
6MS  C16  H13  SING  N  N  34  
6MS  C16  H14  SING  N  N  35  
6MS  C17  H15  SING  N  N  36  
6MS  C17  H16  SING  N  N  37  
6MS  O19  H17  SING  N  N  38  
6MS  O21  H18  SING  N  N  39  
6MS  N03  H5   SING  N  N  40  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
6MS  SMILES            ACDLabs               12.01  "C(CCCCCP(O)(=O)O)n2c1N=C(NC(=O)c1nc2)N"  
6MS  InChI             InChI                 1.03   "InChI=1S/C11H18N5O4P/c12-11-14-9-8(10(17)15-11)13-7-16(9)5-3-1-2-4-6-21(18,19)20/h7H,1-6H2,(H2,18,19,20)(H3,12,14,15,17)"  
6MS  InChIKey          InChI                 1.03   CULYTKHWSUTBGY-UHFFFAOYSA-N  
6MS  SMILES_CANONICAL  CACTVS                3.385  "NC1=Nc2n(CCCCCC[P](O)(O)=O)cnc2C(=O)N1"  
6MS  SMILES            CACTVS                3.385  "NC1=Nc2n(CCCCCC[P](O)(O)=O)cnc2C(=O)N1"  
6MS  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.4  "c1nc2c(n1CCCCCCP(=O)(O)O)N=C(NC2=O)N"  
6MS  SMILES            "OpenEye OEToolkits"  2.0.4  "c1nc2c(n1CCCCCCP(=O)(O)O)N=C(NC2=O)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
6MS  "SYSTEMATIC NAME"  ACDLabs               12.01  "[6-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)hexyl]phosphonic acid"  
6MS  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.4  "6-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)hexylphosphonic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
6MS  "Create component"    2016-05-09  RCSB  
6MS  "Other modification"  2016-05-11  RCSB  
6MS  "Initial release"     2016-11-09  RCSB  
6MS  "Modify synonyms"     2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     6MS
_pdbx_chem_comp_synonyms.name        9-[7-(phosphonoheptyl]guanine
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
