data_A1BJS
# 
_chem_comp.id                                    A1BJS 
_chem_comp.name                                  "6-({[3-(difluoromethyl)phenyl]methyl}sulfanyl)-9H-purine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H10 F2 N4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-12-09 
_chem_comp.pdbx_modified_date                    2025-08-15 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        292.307 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1BJS 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7HQF 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1BJS N2  N1  N 0 1 Y N N N N N -46.608 -29.411 3.346  4.698  0.759  -1.239 N2  A1BJS 1  
A1BJS C3  C1  C 0 1 Y N N N N N -54.030 -28.536 9.071  -4.385 0.882  0.889  C3  A1BJS 2  
A1BJS C6  C2  C 0 1 Y N N N N N -51.474 -29.493 8.234  -1.748 1.040  0.073  C6  A1BJS 3  
A1BJS C9  C3  C 0 1 Y N N N N N -47.917 -29.186 3.528  3.612  1.397  -1.620 C9  A1BJS 4  
A1BJS C12 C4  C 0 1 Y N N N N N -44.294 -29.553 6.068  4.886  -1.728 1.251  C12 A1BJS 5  
A1BJS C1  C5  C 0 1 N N N N N N -54.936 -28.621 6.728  -4.874 -0.879 -0.822 C1  A1BJS 6  
A1BJS C10 C6  C 0 1 Y N N N N N -45.914 -29.423 4.527  4.641  -0.164 -0.283 C10 A1BJS 7  
A1BJS C11 C7  C 0 1 Y N N N N N -46.480 -29.221 5.835  3.404  -0.451 0.317  C11 A1BJS 8  
A1BJS C13 C8  C 0 1 Y N N N N N -52.537 -29.297 7.325  -2.615 0.166  -0.556 C13 A1BJS 9  
A1BJS C2  C9  C 0 1 Y N N N N N -53.794 -28.824 7.728  -3.932 0.083  -0.145 C2  A1BJS 10 
A1BJS C4  C10 C 0 1 Y N N N N N -53.003 -28.715 9.996  -3.521 1.763  1.511  C4  A1BJS 11 
A1BJS C5  C11 C 0 1 Y N N N N N -51.755 -29.189 9.581  -2.203 1.842  1.103  C5  A1BJS 12 
A1BJS C7  C12 C 0 1 N N N N N N -50.124 -30.015 7.773  -0.311 1.126  -0.371 C7  A1BJS 13 
A1BJS C8  C13 C 0 1 Y N N N N N -47.879 -28.990 5.878  2.272  0.257  -0.125 C8  A1BJS 14 
A1BJS F1  F1  F 0 1 N N N N N N -55.455 -29.790 6.293  -4.155 -1.986 -1.287 F1  A1BJS 15 
A1BJS F2  F2  F 0 1 N N N N N N -56.024 -28.016 7.275  -5.844 -1.303 0.091  F2  A1BJS 16 
A1BJS N1  N2  N 0 1 Y N N N N N -48.575 -28.979 4.731  2.427  1.163  -1.087 N1  A1BJS 17 
A1BJS N3  N3  N 0 1 Y N N N N N -45.418 -29.315 6.773  3.623  -1.413 1.244  N3  A1BJS 18 
A1BJS N4  N4  N 0 1 Y N N N N N -44.567 -29.623 4.703  5.557  -0.984 0.326  N4  A1BJS 19 
A1BJS S1  S1  S 0 1 N N N N N N -48.770 -28.725 7.430  0.686  -0.048 0.579  S1  A1BJS 20 
A1BJS H2  H1  H 0 1 N N N N N N -54.997 -28.178 9.391  -5.415 0.820  1.207  H2  A1BJS 21 
A1BJS H7  H2  H 0 1 N N N N N N -48.528 -29.163 2.638  3.693  2.141  -2.399 H7  A1BJS 22 
A1BJS H8  H3  H 0 1 N N N N N N -43.313 -29.673 6.503  5.337  -2.469 1.895  H8  A1BJS 23 
A1BJS H1  H4  H 0 1 N N N N N N -54.550 -28.030 5.884  -5.359 -0.381 -1.662 H1  A1BJS 24 
A1BJS H10 H5  H 0 1 N N N N N N -52.376 -29.520 6.281  -2.261 -0.458 -1.363 H10 A1BJS 25 
A1BJS H3  H6  H 0 1 N N N N N N -53.172 -28.487 11.038 -3.876 2.390  2.315  H3  A1BJS 26 
A1BJS H4  H7  H 0 1 N N N N N N -50.979 -29.327 10.319 -1.525 2.525  1.594  H4  A1BJS 27 
A1BJS H5  H8  H 0 1 N N N N N N -50.287 -30.580 6.843  -0.243 0.885  -1.432 H5  A1BJS 28 
A1BJS H6  H9  H 0 1 N N N N N N -49.747 -30.693 8.553  0.061  2.137  -0.204 H6  A1BJS 29 
A1BJS H9  H11 H 0 1 N N N N N N -43.898 -29.790 3.978  6.506  -1.028 0.134  H9  A1BJS 30 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1BJS N2  C9  DOUB Y N 1  
A1BJS N2  C10 SING Y N 2  
A1BJS C9  N1  SING Y N 3  
A1BJS C10 N4  SING Y N 4  
A1BJS C10 C11 DOUB Y N 5  
A1BJS N4  C12 SING Y N 6  
A1BJS N1  C8  DOUB Y N 7  
A1BJS C11 C8  SING Y N 8  
A1BJS C11 N3  SING Y N 9  
A1BJS C8  S1  SING N N 10 
A1BJS C12 N3  DOUB Y N 11 
A1BJS F1  C1  SING N N 12 
A1BJS C1  F2  SING N N 13 
A1BJS C1  C2  SING N N 14 
A1BJS C13 C2  DOUB Y N 15 
A1BJS C13 C6  SING Y N 16 
A1BJS S1  C7  SING N N 17 
A1BJS C2  C3  SING Y N 18 
A1BJS C7  C6  SING N N 19 
A1BJS C6  C5  DOUB Y N 20 
A1BJS C3  C4  DOUB Y N 21 
A1BJS C5  C4  SING Y N 22 
A1BJS C3  H2  SING N N 23 
A1BJS C9  H7  SING N N 24 
A1BJS C12 H8  SING N N 25 
A1BJS C1  H1  SING N N 26 
A1BJS C13 H10 SING N N 27 
A1BJS C4  H3  SING N N 28 
A1BJS C5  H4  SING N N 29 
A1BJS C7  H5  SING N N 30 
A1BJS C7  H6  SING N N 31 
A1BJS N4  H9  SING N N 32 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1BJS SMILES           ACDLabs              14.52   "FC(F)c1cccc(c1)CSc1ncnc2[NH]cnc21"                                                                                 
A1BJS InChI            InChI                1.06    "InChI=1S/C13H10F2N4S/c14-11(15)9-3-1-2-8(4-9)5-20-13-10-12(17-6-16-10)18-7-19-13/h1-4,6-7,11H,5H2,(H,16,17,18,19)" 
A1BJS InChIKey         InChI                1.06    LDFHABHDJCVWSS-UHFFFAOYSA-N                                                                                         
A1BJS SMILES_CANONICAL CACTVS               3.385   "FC(F)c1cccc(CSc2ncnc3[nH]cnc23)c1"                                                                                 
A1BJS SMILES           CACTVS               3.385   "FC(F)c1cccc(CSc2ncnc3[nH]cnc23)c1"                                                                                 
A1BJS SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(cc(c1)C(F)F)CSc2c3c([nH]cn3)ncn2"                                                                             
A1BJS SMILES           "OpenEye OEToolkits" 3.1.0.0 "c1cc(cc(c1)C(F)F)CSc2c3c([nH]cn3)ncn2"                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1BJS "SYSTEMATIC NAME" ACDLabs              14.52   "6-({[3-(difluoromethyl)phenyl]methyl}sulfanyl)-9H-purine"        
A1BJS "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "6-[[3-[bis(fluoranyl)methyl]phenyl]methylsulfanyl]-9~{H}-purine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1BJS "Create component" 2024-12-09 RCSB 
A1BJS "Initial release"  2025-08-20 RCSB 
# 
