data_A1ICS
# 
_chem_comp.id                                    A1ICS 
_chem_comp.name                                  "3-[[1-[(2~{S},3~{S})-1-methyl-6-oxidanylidene-2-phenyl-piperidin-3-yl]carbonyl-4-oxidanyl-piperidin-4-yl]methyl]quinazolin-4-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H30 N4 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-06-04 
_chem_comp.pdbx_modified_date                    2024-11-01 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        474.552 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1ICS 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9FIR 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1ICS N1  N1  N 0 1 N N N N N N 79.068 -16.796 16.689 -4.949 1.656  -0.153 N1  A1ICS 1  
A1ICS N3  N2  N 0 1 N N N N N N 76.037 -16.143 8.693  3.996  -0.102 -1.069 N3  A1ICS 2  
A1ICS C4  C1  C 0 1 N N N N N N 79.377 -14.081 15.625 -2.547 1.581  -1.599 C4  A1ICS 3  
A1ICS C5  C2  C 0 1 N N S N N N 79.856 -15.353 14.923 -2.838 0.477  -0.574 C5  A1ICS 4  
A1ICS C6  C3  C 0 1 N N N N N N 80.269 -15.203 13.455 -2.272 -0.831 -1.063 C6  A1ICS 5  
A1ICS C7  C4  C 0 1 N N N N N N 80.129 -14.892 11.061 -0.389 -2.364 -1.376 C7  A1ICS 6  
A1ICS C8  C5  C 0 1 N N N N N N 79.498 -15.911 10.160 0.886  -1.987 -2.137 C8  A1ICS 7  
A1ICS C10 C6  C 0 1 N N N N N N 77.326 -16.740 9.058  3.105  -0.853 -1.957 C10 A1ICS 8  
A1ICS C13 C7  C 0 1 Y N N N N N 72.577 -14.223 7.520  6.415  2.234  1.368  C13 A1ICS 9  
A1ICS C15 C8  C 0 1 Y N N N N N 71.323 -15.351 9.242  7.503  0.257  2.199  C15 A1ICS 10 
A1ICS C17 C9  C 0 1 Y N N N N N 73.682 -15.759 9.030  5.760  0.039  0.572  C17 A1ICS 11 
A1ICS C20 C10 C 0 1 N N N N N N 78.057 -14.684 12.369 -0.149 -0.267 0.017  C20 A1ICS 12 
A1ICS C21 C11 C 0 1 N N S N N N 78.850 -16.474 15.261 -4.353 0.350  -0.407 C21 A1ICS 13 
A1ICS C22 C12 C 0 1 Y N N N N N 78.848 -17.674 14.314 -4.652 -0.568 0.750  C22 A1ICS 14 
A1ICS C24 C13 C 0 1 Y N N N N N 79.906 -19.352 12.957 -5.270 -2.728 1.577  C24 A1ICS 15 
A1ICS C26 C14 C 0 1 Y N N N N N 77.565 -19.239 13.024 -4.850 -0.936 3.108  C26 A1ICS 16 
A1ICS C1  C15 C 0 1 N N N N N N 78.973 -18.181 17.152 -6.286 1.695  0.445  C1  A1ICS 17 
A1ICS C2  C16 C 0 1 N N N N N N 79.331 -15.806 17.578 -4.352 2.816  -0.426 C2  A1ICS 18 
A1ICS O1  O1  O 0 1 N N N N N N 79.489 -16.058 18.771 -4.961 3.841  -0.203 O1  A1ICS 19 
A1ICS C3  C17 C 0 1 N N N N N N 79.407 -14.361 17.130 -2.966 2.922  -0.993 C3  A1ICS 20 
A1ICS O2  O2  O 0 1 N N N N N N 81.463 -15.391 13.198 -2.976 -1.604 -1.679 O2  A1ICS 21 
A1ICS N2  N3  N 0 1 N N N N N N 79.506 -14.923 12.393 -0.984 -1.143 -0.816 N2  A1ICS 22 
A1ICS C9  C18 C 0 1 N N N N N N 77.987 -15.731 10.034 1.816  -1.202 -1.210 C9  A1ICS 23 
A1ICS O3  O3  O 0 1 N N N N N N 77.865 -14.466 9.402  2.130  -1.998 -0.065 O3  A1ICS 24 
A1ICS C11 C19 C 0 1 N N N N N N 76.001 -15.216 7.682  3.915  1.253  -1.024 C11 A1ICS 25 
A1ICS N4  N4  N 0 1 N N N N N N 74.941 -14.614 7.260  4.668  1.989  -0.265 N4  A1ICS 26 
A1ICS C12 C20 C 0 1 Y N N N N N 73.749 -14.872 7.942  5.604  1.443  0.551  C12 A1ICS 27 
A1ICS C14 C21 C 0 1 Y N N N N N 71.380 -14.473 8.142  7.353  1.637  2.181  C14 A1ICS 28 
A1ICS C16 C22 C 0 1 Y N N N N N 72.460 -15.991 9.679  6.712  -0.545 1.405  C16 A1ICS 29 
A1ICS C18 C23 C 0 1 N N N N N N 74.901 -16.445 9.464  4.888  -0.765 -0.296 C18 A1ICS 30 
A1ICS O4  O4  O 0 1 N N N N N N 74.955 -17.225 10.419 4.968  -1.979 -0.323 O4  A1ICS 31 
A1ICS C19 C24 C 0 1 N N N N N N 77.354 -15.648 11.431 1.123  0.086  -0.760 C19 A1ICS 32 
A1ICS C23 C25 C 0 1 Y N N N N N 79.983 -18.289 13.838 -4.996 -1.886 0.516  C23 A1ICS 33 
A1ICS C25 C26 C 0 1 Y N N N N N 78.702 -19.825 12.554 -5.200 -2.252 2.873  C25 A1ICS 34 
A1ICS C27 C27 C 0 1 Y N N N N N 77.636 -18.171 13.893 -4.576 -0.093 2.046  C27 A1ICS 35 
A1ICS H7  H1  H 0 1 N N N N N N 80.046 -13.242 15.384 -1.481 1.597  -1.827 H7  A1ICS 36 
A1ICS H6  H2  H 0 1 N N N N N N 78.353 -13.837 15.307 -3.114 1.398  -2.512 H6  A1ICS 37 
A1ICS H8  H3  H 0 1 N N N N N N 80.780 -15.636 15.449 -2.386 0.739  0.382  H8  A1ICS 38 
A1ICS H10 H4  H 0 1 N N N N N N 81.203 -15.111 11.159 -1.096 -2.836 -2.058 H10 A1ICS 39 
A1ICS H9  H5  H 0 1 N N N N N N 79.997 -13.891 10.623 -0.144 -3.054 -0.568 H9  A1ICS 40 
A1ICS H12 H6  H 0 1 N N N N N N 79.700 -16.913 10.566 1.389  -2.893 -2.476 H12 A1ICS 41 
A1ICS H11 H7  H 0 1 N N N N N N 79.948 -15.823 9.160  0.626  -1.372 -2.999 H11 A1ICS 42 
A1ICS H15 H8  H 0 1 N N N N N N 77.174 -17.711 9.553  2.866  -0.247 -2.830 H15 A1ICS 43 
A1ICS H14 H9  H 0 1 N N N N N N 77.953 -16.878 8.165  3.600  -1.771 -2.276 H14 A1ICS 44 
A1ICS H17 H10 H 0 1 N N N N N N 72.618 -13.522 6.700  6.308  3.308  1.362  H17 A1ICS 45 
A1ICS H19 H11 H 0 1 N N N N N N 70.383 -15.523 9.745  8.242  -0.193 2.845  H19 A1ICS 46 
A1ICS H23 H12 H 0 1 N N N N N N 77.869 -13.654 12.031 -0.698 0.644  0.254  H23 A1ICS 47 
A1ICS H24 H13 H 0 1 N N N N N N 77.655 -14.815 13.385 0.116  -0.784 0.939  H24 A1ICS 48 
A1ICS H25 H14 H 0 1 N N N N N N 77.851 -16.020 15.186 -4.781 -0.071 -1.317 H25 A1ICS 49 
A1ICS H27 H15 H 0 1 N N N N N N 80.812 -19.809 12.587 -5.539 -3.758 1.394  H27 A1ICS 50 
A1ICS H29 H16 H 0 1 N N N N N N 76.601 -19.614 12.713 -4.790 -0.565 4.120  H29 A1ICS 51 
A1ICS H1  H17 H 0 1 N N N N N N 79.165 -18.220 18.234 -6.594 2.732  0.579  H1  A1ICS 52 
A1ICS H2  H18 H 0 1 N N N N N N 77.965 -18.569 16.944 -6.993 1.188  -0.211 H2  A1ICS 53 
A1ICS H3  H19 H 0 1 N N N N N N 79.718 -18.795 16.625 -6.265 1.195  1.414  H3  A1ICS 54 
A1ICS H5  H20 H 0 1 N N N N N N 80.346 -13.944 17.523 -2.268 3.195  -0.201 H5  A1ICS 55 
A1ICS H4  H21 H 0 1 N N N N N N 78.554 -13.832 17.580 -2.951 3.690  -1.767 H4  A1ICS 56 
A1ICS H13 H22 H 0 1 N N N N N N 78.254 -13.797 9.953  2.717  -1.563 0.568  H13 A1ICS 57 
A1ICS H16 H23 H 0 1 N N N N N N 76.936 -14.970 7.200  3.187  1.744  -1.653 H16 A1ICS 58 
A1ICS H18 H24 H 0 1 N N N N N N 70.479 -13.995 7.787  7.980  2.250  2.812  H18 A1ICS 59 
A1ICS H20 H25 H 0 1 N N N N N N 72.412 -16.669 10.518 6.833  -1.618 1.423  H20 A1ICS 60 
A1ICS H21 H26 H 0 1 N N N N N N 76.309 -15.322 11.319 0.861  0.683  -1.634 H21 A1ICS 61 
A1ICS H22 H27 H 0 1 N N N N N N 77.379 -16.651 11.883 1.795  0.656  -0.118 H22 A1ICS 62 
A1ICS H26 H28 H 0 1 N N N N N N 80.952 -17.935 14.158 -5.051 -2.258 -0.497 H26 A1ICS 63 
A1ICS H28 H29 H 0 1 N N N N N N 78.644 -20.657 11.868 -5.414 -2.910 3.702  H28 A1ICS 64 
A1ICS H30 H30 H 0 1 N N N N N N 76.724 -17.716 14.250 -4.302 0.935  2.230  H30 A1ICS 65 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1ICS N4  C11 DOUB N N 1  
A1ICS N4  C12 SING N N 2  
A1ICS C13 C12 DOUB Y N 3  
A1ICS C13 C14 SING Y N 4  
A1ICS C11 N3  SING N N 5  
A1ICS C12 C17 SING Y N 6  
A1ICS C14 C15 DOUB Y N 7  
A1ICS N3  C10 SING N N 8  
A1ICS N3  C18 SING N N 9  
A1ICS C17 C18 SING N N 10 
A1ICS C17 C16 DOUB Y N 11 
A1ICS C10 C9  SING N N 12 
A1ICS C15 C16 SING Y N 13 
A1ICS O3  C9  SING N N 14 
A1ICS C18 O4  DOUB N N 15 
A1ICS C9  C8  SING N N 16 
A1ICS C9  C19 SING N N 17 
A1ICS C8  C7  SING N N 18 
A1ICS C7  N2  SING N N 19 
A1ICS C19 C20 SING N N 20 
A1ICS C20 N2  SING N N 21 
A1ICS N2  C6  SING N N 22 
A1ICS C25 C24 DOUB Y N 23 
A1ICS C25 C26 SING Y N 24 
A1ICS C24 C23 SING Y N 25 
A1ICS C26 C27 DOUB Y N 26 
A1ICS O2  C6  DOUB N N 27 
A1ICS C6  C5  SING N N 28 
A1ICS C23 C22 DOUB Y N 29 
A1ICS C27 C22 SING Y N 30 
A1ICS C22 C21 SING N N 31 
A1ICS C5  C21 SING N N 32 
A1ICS C5  C4  SING N N 33 
A1ICS C21 N1  SING N N 34 
A1ICS C4  C3  SING N N 35 
A1ICS N1  C1  SING N N 36 
A1ICS N1  C2  SING N N 37 
A1ICS C3  C2  SING N N 38 
A1ICS C2  O1  DOUB N N 39 
A1ICS C4  H7  SING N N 40 
A1ICS C4  H6  SING N N 41 
A1ICS C5  H8  SING N N 42 
A1ICS C7  H10 SING N N 43 
A1ICS C7  H9  SING N N 44 
A1ICS C8  H12 SING N N 45 
A1ICS C8  H11 SING N N 46 
A1ICS C10 H15 SING N N 47 
A1ICS C10 H14 SING N N 48 
A1ICS C13 H17 SING N N 49 
A1ICS C15 H19 SING N N 50 
A1ICS C20 H23 SING N N 51 
A1ICS C20 H24 SING N N 52 
A1ICS C21 H25 SING N N 53 
A1ICS C24 H27 SING N N 54 
A1ICS C26 H29 SING N N 55 
A1ICS C1  H1  SING N N 56 
A1ICS C1  H2  SING N N 57 
A1ICS C1  H3  SING N N 58 
A1ICS C3  H5  SING N N 59 
A1ICS C3  H4  SING N N 60 
A1ICS O3  H13 SING N N 61 
A1ICS C11 H16 SING N N 62 
A1ICS C14 H18 SING N N 63 
A1ICS C16 H20 SING N N 64 
A1ICS C19 H21 SING N N 65 
A1ICS C19 H22 SING N N 66 
A1ICS C23 H26 SING N N 67 
A1ICS C25 H28 SING N N 68 
A1ICS C27 H30 SING N N 69 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1ICS InChI            InChI                1.06  "InChI=1S/C27H30N4O4/c1-29-23(32)12-11-21(24(29)19-7-3-2-4-8-19)26(34)30-15-13-27(35,14-16-30)17-31-18-28-22-10-6-5-9-20(22)25(31)33/h2-10,18,21,24,35H,11-17H2,1H3/t21-,24+/m0/s1" 
A1ICS InChIKey         InChI                1.06  LFWWCQUMVDUXSY-XUZZJYLKSA-N                                                                                                                                                         
A1ICS SMILES_CANONICAL CACTVS               3.385 "CN1[C@@H]([C@H](CCC1=O)C(=O)N2CCC(O)(CC2)CN3C=Nc4ccccc4C3=O)c5ccccc5"                                                                                                              
A1ICS SMILES           CACTVS               3.385 "CN1[CH]([CH](CCC1=O)C(=O)N2CCC(O)(CC2)CN3C=Nc4ccccc4C3=O)c5ccccc5"                                                                                                                 
A1ICS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN1[C@@H]([C@H](CCC1=O)C(=O)N2CCC(CC2)(CN3C=Nc4ccccc4C3=O)O)c5ccccc5"                                                                                                              
A1ICS SMILES           "OpenEye OEToolkits" 2.0.7 "CN1C(C(CCC1=O)C(=O)N2CCC(CC2)(CN3C=Nc4ccccc4C3=O)O)c5ccccc5"                                                                                                                       
# 
_pdbx_chem_comp_identifier.comp_id           A1ICS 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "3-[[1-[(2~{S},3~{S})-1-methyl-6-oxidanylidene-2-phenyl-piperidin-3-yl]carbonyl-4-oxidanyl-piperidin-4-yl]methyl]quinazolin-4-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1ICS "Create component" 2024-06-04 PDBE 
A1ICS "Initial release"  2024-11-06 RCSB 
# 
