data_GCS
# 
_chem_comp.id                                    GCS 
_chem_comp.name                                  2-amino-2-deoxy-beta-D-glucopyranose 
_chem_comp.type                                  "D-saccharide, beta linking" 
_chem_comp.pdbx_type                             ATOMS 
_chem_comp.formula                               "C6 H13 N O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "beta-D-glucosamine; 2-amino-2-deoxy-beta-D-glucose; 2-amino-2-deoxy-D-glucose; 2-amino-2-deoxy-glucose; D-GLUCOSAMINE" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2000-06-20 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        179.171 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     GCS 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1QGI 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_pdbx_chem_comp_synonyms.ordinal 
_pdbx_chem_comp_synonyms.comp_id 
_pdbx_chem_comp_synonyms.name 
_pdbx_chem_comp_synonyms.provenance 
_pdbx_chem_comp_synonyms.type 
1 GCS beta-D-glucosamine             PDB ? 
2 GCS 2-amino-2-deoxy-beta-D-glucose PDB ? 
3 GCS 2-amino-2-deoxy-D-glucose      PDB ? 
4 GCS 2-amino-2-deoxy-glucose        PDB ? 
5 GCS D-GLUCOSAMINE                  PDB ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
GCS C1   C1   C 0 1 N N R N N N 20.309 45.844 45.851 1.385  -0.247 0.637  C1   GCS 1  
GCS C2   C2   C 0 1 N N R N N N 21.106 44.545 45.841 0.298  0.219  1.607  C2   GCS 2  
GCS C3   C3   C 0 1 N N R N N N 21.407 44.209 44.416 -1.069 -0.233 1.085  C3   GCS 3  
GCS C4   C4   C 0 1 N N S N N N 20.111 44.050 43.598 -1.228 0.254  -0.359 C4   GCS 4  
GCS C5   C5   C 0 1 N N R N N N 19.538 45.466 43.471 -0.026 -0.215 -1.181 C5   GCS 5  
GCS C6   C6   C 0 1 N N N N N N 18.173 45.544 42.622 -0.193 0.240  -2.632 C6   GCS 6  
GCS N2   N2   N 0 1 N N N N N N 22.354 44.690 46.630 0.537  -0.367 2.933  N2   GCS 7  
GCS O1   O1   O 0 1 N Y N N N N 19.650 46.418 47.033 2.666  0.146  1.132  O1   GCS 8  
GCS O3   O3   O 0 1 N N N N N N 22.221 42.928 44.354 -2.107 0.321  1.895  O3   GCS 9  
GCS O4   O4   O 0 1 N N N N N N 20.904 43.963 42.404 -2.429 -0.283 -0.918 O4   GCS 10 
GCS O5   O5   O 0 1 N N N N N N 19.211 45.844 44.868 1.172  0.340  -0.645 O5   GCS 11 
GCS O6   O6   O 0 1 N N N N N N 17.624 46.975 42.524 0.924  -0.202 -3.403 O6   GCS 12 
GCS H1   H1   H 0 1 N N N N N N 21.215 46.468 45.674 1.349  -1.333 0.548  H1   GCS 13 
GCS H2   H2   H 0 1 N N N N N N 20.517 43.723 46.311 0.318  1.306  1.681  H2   GCS 14 
GCS H3   H31  H 0 1 N N N N N N 21.994 45.046 43.973 -1.127 -1.321 1.112  H3   GCS 15 
GCS H4   H4   H 0 1 N N N N N N 19.330 43.310 43.891 -1.275 1.343  -0.372 H4   GCS 16 
GCS H5   H5   H 0 1 N N N N N N 20.271 46.121 42.946 0.032  -1.303 -1.148 H5   GCS 17 
GCS H61  H61  H 0 1 N N N N N N 18.303 45.093 41.610 -1.109 -0.183 -3.043 H61  GCS 18 
GCS H62  H62  H 0 1 N N N N N N 17.405 44.846 43.031 -0.250 1.328  -2.666 H62  GCS 19 
GCS HN21 HN21 H 0 0 N N N N N N 22.887 43.820 46.623 1.445  -0.045 3.233  HN21 GCS 20 
GCS HN22 HN22 H 0 0 N Y N N N N 22.165 45.010 47.579 -0.138 0.044  3.558  HN22 GCS 21 
GCS HO1  HO1  H 0 1 N Y N N N N 19.153 47.227 47.039 3.321  -0.166 0.493  HO1  GCS 22 
GCS HO3  H32  H 0 1 N Y N N N N 22.412 42.714 43.448 -1.969 -0.010 2.793  HO3  GCS 23 
GCS HO4  HO4  H 0 1 N Y N N N N 20.104 43.865 41.899 -2.485 0.044  -1.826 HO4  GCS 24 
GCS HO6  HO6  H 0 1 N Y N N N N 16.818 47.021 42.022 0.779  0.105  -4.308 HO6  GCS 25 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
GCS C1 C2   SING N N 1  
GCS C1 O1   SING N N 2  
GCS C1 O5   SING N N 3  
GCS C1 H1   SING N N 4  
GCS C2 C3   SING N N 5  
GCS C2 N2   SING N N 6  
GCS C2 H2   SING N N 7  
GCS C3 C4   SING N N 8  
GCS C3 O3   SING N N 9  
GCS C3 H3   SING N N 10 
GCS C4 C5   SING N N 11 
GCS C4 O4   SING N N 12 
GCS C4 H4   SING N N 13 
GCS C5 C6   SING N N 14 
GCS C5 O5   SING N N 15 
GCS C5 H5   SING N N 16 
GCS C6 O6   SING N N 17 
GCS C6 H61  SING N N 18 
GCS C6 H62  SING N N 19 
GCS N2 HN21 SING N N 20 
GCS N2 HN22 SING N N 21 
GCS O1 HO1  SING N N 22 
GCS O3 HO3  SING N N 23 
GCS O4 HO4  SING N N 24 
GCS O6 HO6  SING N N 25 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
GCS SMILES           ACDLabs              10.04 "OC1C(O)C(OC(O)C1N)CO"                                                                   
GCS SMILES_CANONICAL CACTVS               3.341 "N[C@H]1[C@H](O)O[C@H](CO)[C@@H](O)[C@@H]1O"                                             
GCS SMILES           CACTVS               3.341 "N[CH]1[CH](O)O[CH](CO)[CH](O)[CH]1O"                                                    
GCS SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)N)O)O)O"                                        
GCS SMILES           "OpenEye OEToolkits" 1.5.0 "C(C1C(C(C(C(O1)O)N)O)O)O"                                                               
GCS InChI            InChI                1.03  "InChI=1S/C6H13NO5/c7-3-5(10)4(9)2(1-8)12-6(3)11/h2-6,8-11H,1,7H2/t2-,3-,4-,5-,6-/m1/s1" 
GCS InChIKey         InChI                1.03  MSWZFWKMSRAUBD-QZABAPFNSA-N                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
GCS "SYSTEMATIC NAME"                     ACDLabs              10.04 2-amino-2-deoxy-beta-D-glucopyranose                          
GCS "SYSTEMATIC NAME"                     "OpenEye OEToolkits" 1.5.0 "(2R,3R,4R,5S,6R)-3-amino-6-(hydroxymethyl)oxane-2,4,5-triol" 
GCS "CONDENSED IUPAC CARBOHYDRATE SYMBOL" GMML                 1.0   DGlcpNb                                                       
GCS "COMMON NAME"                         GMML                 1.0   b-D-glucopyranosamine                                         
GCS "IUPAC CARBOHYDRATE SYMBOL"           PDB-CARE             1.0   b-D-GlcpN                                                     
GCS "SNFG CARBOHYDRATE SYMBOL"            GMML                 1.0   GlcN                                                          
# 
loop_
_pdbx_chem_comp_feature.comp_id 
_pdbx_chem_comp_feature.type 
_pdbx_chem_comp_feature.value 
_pdbx_chem_comp_feature.source 
_pdbx_chem_comp_feature.support 
GCS "CARBOHYDRATE ISOMER"                 D        PDB ? 
GCS "CARBOHYDRATE RING"                   pyranose PDB ? 
GCS "CARBOHYDRATE ANOMER"                 beta     PDB ? 
GCS "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose   PDB ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
GCS "Create component"         2000-06-20 RCSB 
GCS "Modify descriptor"        2011-06-04 RCSB 
GCS "Other modification"       2019-08-12 RCSB 
GCS "Other modification"       2019-12-19 RCSB 
GCS "Other modification"       2020-07-03 RCSB 
GCS "Modify name"              2020-07-17 RCSB 
GCS "Modify synonyms"          2020-07-17 RCSB 
GCS "Modify atom id"           2020-07-17 RCSB 
GCS "Modify component atom id" 2020-07-17 RCSB 
GCS "Modify PCM"               2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            GCS 
_pdbx_chem_comp_pcm.modified_residue_id                GHP 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Carbohydrate 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C1 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   O4 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
