data_SSS
#

_chem_comp.id                                   SSS
_chem_comp.name                                 "N-{[5-AMINO-1-(5-O-PHOSPHONO-BETA-D-ARABINOFURANOSYL)-1H-IMIDAZOL-4-YL]CARBONYL}-L-ASPARTIC ACID"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C13 H19 N4 O12 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "N-{[5-AMINO-1-(5-O-PHOSPHONO-BETA-D-ARABINOFURANOSYL)-1H-IMIDAZOL-4-YL]CARBONYL}-L-ASPARTIC ACID"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2006-05-24
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       454.283
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    SSS
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       "OpenEye/OEToolkits V1.4.2"
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2CNV
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
SSS  PA      PA      P  0  1  N  N  N  -7.558  25.536   -6.448   -3.470  -6.068   0.377  PA      SSS   1  
SSS  O1A     O1A     O  0  1  N  N  N  -6.904  26.265   -7.587   -2.508  -6.911   1.367  O1A     SSS   2  
SSS  O2A     O2A     O  0  1  N  N  N  -7.341  24.043   -6.485   -4.713  -5.658   1.327  O2A     SSS   3  
SSS  O3A     O3A     O  0  1  N  N  N  -8.968  25.963   -6.165   -3.839  -6.770  -0.897  O3A     SSS   4  
SSS  "O5'"   "O5'"   O  0  1  N  N  N  -6.748  26.013   -5.150   -2.661  -4.679   0.183  "O5'"   SSS   5  
SSS  "C5'"   "C5'"   C  0  1  N  N  N  -6.809  25.313   -3.909   -2.275  -3.954   1.337  "C5'"   SSS   6  
SSS  "C4'"   "C4'"   C  0  1  N  N  R  -6.027  26.095   -2.864   -1.537  -2.701   0.901  "C4'"   SSS   7  
SSS  "O4'"   "O4'"   O  0  1  N  N  N  -4.748  26.414   -3.408   -2.410  -1.876   0.110  "O4'"   SSS   8  
SSS  "C1'"   "C1'"   C  0  1  N  N  R  -4.347  27.707   -2.953   -2.082  -0.493   0.362  "C1'"   SSS   9  
SSS  N9      N9      N  0  1  Y  N  N  -3.440  28.388   -3.916   -3.297   0.222   0.747  N9      SSS  10  
SSS  C4      C4      C  0  1  Y  N  N  -3.383  28.345   -5.249   -3.620   1.527   0.474  C4      SSS  11  
SSS  O6      O6      O  0  1  N  N  N  -2.256  28.452   -7.993   -5.207   3.960   0.457  O6      SSS  12  
SSS  N3      N3      N  0  1  N  N  N  -4.252  27.645   -6.044   -2.794   2.331  -0.227  N3      SSS  13  
SSS  C6      C6      C  0  1  N  N  N  -1.996  29.316   -7.166   -5.620   2.930   1.043  C6      SSS  14  
SSS  N6      N6      N  0  1  N  N  N  -1.380  30.461   -7.473   -6.869   2.920   1.696  N6      SSS  15  
SSS  C61     C61     C  0  1  N  N  S  -0.966  30.813   -8.827   -7.766   4.052   1.756  C61     SSS  16  
SSS  C62     C62     C  0  1  N  N  N   0.396  30.270   -9.168   -7.418   4.971   2.915  C62     SSS  17  
SSS  C63     C63     C  0  1  N  N  N  -0.950  32.341   -8.834   -9.223   3.594   1.865  C63     SSS  18  
SSS  C64     C64     C  0  1  N  N  N  -2.122  32.871   -9.630   -9.648   2.704   0.716  C64     SSS  19  
SSS  O65     O65     O  0  1  N  N  N   0.944  30.668  -10.210   -7.975   6.042   3.126  O65     SSS  20  
SSS  O66     O66     O  0  1  N  N  N   0.946  29.437   -8.414   -6.421   4.495   3.698  O66     SSS  21  
SSS  O67     O67     O  0  1  N  N  N  -3.075  33.384   -9.003   -9.218   2.764  -0.428  O67     SSS  22  
SSS  O68     O68     O  0  1  N  N  N  -2.103  32.787  -10.883  -10.589   1.805   1.107  O68     SSS  23  
SSS  C5      C5      C  0  1  Y  N  N  -2.344  29.117   -5.731   -4.853   1.720   1.051  C5      SSS  24  
SSS  N7      N7      N  0  1  Y  N  N  -1.746  29.629   -4.634   -5.296   0.576   1.667  N7      SSS  25  
SSS  C8      C8      C  0  1  Y  N  N  -2.415  29.173   -3.544   -4.340  -0.304   1.467  C8      SSS  26  
SSS  "C2'"   "C2'"   C  0  1  N  N  S  -5.609  28.471   -2.563   -0.942  -0.484   1.383  "C2'"   SSS  27  
SSS  "O2'"   "O2'"   O  0  1  N  N  N  -6.021  29.501   -3.455   -1.004   0.578   2.314  "O2'"   SSS  28  
SSS  "C3'"   "C3'"   C  0  1  N  N  S  -6.687  27.420   -2.504   -1.080  -1.830   2.060  "C3'"   SSS  29  
SSS  "O3'"   "O3'"   O  0  1  N  N  N  -7.133  27.458   -1.155    0.160  -2.262   2.588  "O3'"   SSS  30  
SSS  "H5'1"  "1H5'"  H  0  0  N  N  N  -6.375  24.309   -4.026   -3.166  -3.686   1.907  "H5'1"  SSS  31  
SSS  "H5'2"  "2H5'"  H  0  0  N  N  N  -7.857  25.215   -3.590   -1.623  -4.579   1.951  "H5'2"  SSS  32  
SSS  "H4'"   "H4'"   H  0  1  N  N  N  -5.973  25.467   -1.962   -0.690  -2.997   0.272  "H4'"   SSS  33  
SSS  "H1'"   "H1'"   H  0  1  N  N  N  -3.716  27.640   -2.054   -1.770  -0.031  -0.580  "H1'"   SSS  34  
SSS  H3N1    1H3N    H  0  0  N  N  N  -4.453  28.177   -6.867   -1.870   2.015  -0.559  H3N1    SSS  35  
SSS  H3N2    2H3N    H  0  0  N  N  N  -5.100  27.474   -5.542   -3.002   3.329  -0.384  H3N2    SSS  36  
SSS  H6      H6      H  0  1  N  N  N  -1.193  31.111   -6.736   -7.196   2.050   2.103  H6      SSS  37  
SSS  H61     H61     H  0  1  N  N  N  -1.646  30.384   -9.578   -7.592   4.622   0.836  H61     SSS  38  
SSS  H631    1H63    H  0  0  N  N  N  -0.014  32.689   -9.296   -9.893   4.463   1.857  H631    SSS  39  
SSS  H632    2H63    H  0  0  N  N  N  -1.018  32.709   -7.800   -9.377   3.047   2.803  H632    SSS  40  
SSS  H66     H66     H  0  1  N  N  N   1.792  29.195   -8.772   -6.211   5.106   4.436  H66     SSS  41  
SSS  H68     H68     H  0  1  N  N  N  -2.900  33.164  -11.238  -10.904   1.201   0.401  H68     SSS  42  
SSS  H8      H8      H  0  1  N  N  N  -2.159  29.408   -2.521   -4.342  -1.328   1.815  H8      SSS  43  
SSS  "H2'"   "H2'"   H  0  1  N  N  N  -5.410  29.002   -1.620    0.024  -0.418   0.870  "H2'"   SSS  44  
SSS  HA      HA      H  0  1  N  N  N  -6.113  30.317   -2.977   -0.089   0.843   2.496  HA      SSS  45  
SSS  "H3'"   "H3'"   H  0  1  N  N  N  -7.535  27.568   -3.188   -1.815  -1.795   2.872  "H3'"   SSS  46  
SSS  HB      HB      H  0  1  N  N  N  -6.382  27.466   -0.573    0.332  -1.716   3.370  HB      SSS  47  
SSS  HO1     HO1     H  0  1  N  N  N  -7.295  23.751   -7.388   -5.395  -6.333   1.532  HO1     SSS  48  
SSS  HO2     HO2     H  0  1  N  N  N  -6.766  27.173   -7.345   -2.735  -7.843   1.570  HO2     SSS  49  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
SSS  PA     O1A     SING  N  N   1  
SSS  PA     O2A     SING  N  N   2  
SSS  PA     O3A     DOUB  N  N   3  
SSS  PA     "O5'"   SING  N  N   4  
SSS  "O5'"  "C5'"   SING  N  N   5  
SSS  "C5'"  "C4'"   SING  N  N   6  
SSS  "C5'"  "H5'1"  SING  N  N   7  
SSS  "C5'"  "H5'2"  SING  N  N   8  
SSS  "C4'"  "O4'"   SING  N  N   9  
SSS  "C4'"  "C3'"   SING  N  N  10  
SSS  "C4'"  "H4'"   SING  N  N  11  
SSS  "O4'"  "C1'"   SING  N  N  12  
SSS  "C1'"  N9      SING  N  N  13  
SSS  "C1'"  "C2'"   SING  N  N  14  
SSS  "C1'"  "H1'"   SING  N  N  15  
SSS  N9     C4      SING  Y  N  16  
SSS  N9     C8      SING  Y  N  17  
SSS  C4     N3      SING  N  N  18  
SSS  C4     C5      DOUB  Y  N  19  
SSS  O6     C6      DOUB  N  N  20  
SSS  N3     H3N1    SING  N  N  21  
SSS  N3     H3N2    SING  N  N  22  
SSS  C6     N6      SING  N  N  23  
SSS  C6     C5      SING  N  N  24  
SSS  N6     C61     SING  N  N  25  
SSS  N6     H6      SING  N  N  26  
SSS  C61    C62     SING  N  N  27  
SSS  C61    C63     SING  N  N  28  
SSS  C61    H61     SING  N  N  29  
SSS  C62    O65     DOUB  N  N  30  
SSS  C62    O66     SING  N  N  31  
SSS  C63    C64     SING  N  N  32  
SSS  C63    H631    SING  N  N  33  
SSS  C63    H632    SING  N  N  34  
SSS  C64    O67     DOUB  N  N  35  
SSS  C64    O68     SING  N  N  36  
SSS  O66    H66     SING  N  N  37  
SSS  O68    H68     SING  N  N  38  
SSS  C5     N7      SING  Y  N  39  
SSS  N7     C8      DOUB  Y  N  40  
SSS  C8     H8      SING  N  N  41  
SSS  "C2'"  "O2'"   SING  N  N  42  
SSS  "C2'"  "C3'"   SING  N  N  43  
SSS  "C2'"  "H2'"   SING  N  N  44  
SSS  "O2'"  HA      SING  N  N  45  
SSS  "C3'"  "O3'"   SING  N  N  46  
SSS  "C3'"  "H3'"   SING  N  N  47  
SSS  "O3'"  HB      SING  N  N  48  
SSS  HO1    O2A     SING  N  N  49  
SSS  HO2    O1A     SING  N  N  50  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
SSS  SMILES            ACDLabs               10.04  "O=C(O)CC(C(=O)O)NC(=O)c1ncn(c1N)C2OC(C(O)C2O)COP(=O)(O)O"  
SSS  SMILES_CANONICAL  CACTVS                3.341  "Nc1n(cnc1C(=O)N[C@@H](CC(O)=O)C(O)=O)[C@@H]2O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@@H]2O"  
SSS  SMILES            CACTVS                3.341  "Nc1n(cnc1C(=O)N[CH](CC(O)=O)C(O)=O)[CH]2O[CH](CO[P](O)(O)=O)[CH](O)[CH]2O"  
SSS  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "c1nc(c(n1[C@H]2[C@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)O)N)C(=O)N[C@@H](CC(=O)O)C(=O)O"  
SSS  SMILES            "OpenEye OEToolkits"  1.5.0  "c1nc(c(n1C2C(C(C(O2)COP(=O)(O)O)O)O)N)C(=O)NC(CC(=O)O)C(=O)O"  
SSS  InChI             InChI                 1.03   "InChI=1S/C13H19N4O12P/c14-10-7(11(22)16-4(13(23)24)1-6(18)19)15-3-17(10)12-9(21)8(20)5(29-12)2-28-30(25,26)27/h3-5,8-9,12,20-21H,1-2,14H2,(H,16,22)(H,18,19)(H,23,24)(H2,25,26,27)/t4-,5+,8+,9-,12+/m0/s1"  
SSS  InChIKey          InChI                 1.03   NAQGHJTUZRHGAC-PSYSQGJASA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
SSS  "SYSTEMATIC NAME"  ACDLabs               10.04  "N-{[5-amino-1-(5-O-phosphono-beta-D-arabinofuranosyl)-1H-imidazol-4-yl]carbonyl}-L-aspartic acid"  
SSS  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2S)-2-[[5-amino-1-[(2R,3S,4S,5R)-3,4-dihydroxy-5-(phosphonooxymethyl)oxolan-2-yl]imidazol-4-yl]carbonylamino]butanedioic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
SSS  "Create component"   2006-05-24  EBI   
SSS  "Modify descriptor"  2011-06-04  RCSB  
SSS  "Modify synonyms"    2020-03-16  PDBE  
SSS  "Modify synonyms"    2020-03-17  PDBE  
SSS  "Modify synonyms"    2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     SSS
_pdbx_chem_comp_synonyms.name        "N-{[5-AMINO-1-(5-O-PHOSPHONO-BETA-D-ARABINOFURANOSYL)-1H-IMIDAZOL-4-YL]CARBONYL}-L-ASPARTIC ACID"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
