data_VCS
#

_chem_comp.id                                   VCS
_chem_comp.name                                 "4-[(E)-({1-carboxy-2-[(3S)-2-oxo-2,3-dihydro-1H-indol-3-yl]ethan-1-id-1-yl}iminio)methyl]-2-methyl-5-[(phosphonooxy)methyl]pyridin-1-ium-3-olate"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C19 H20 N3 O8 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-07-29
_chem_comp.pdbx_modified_date                   2021-01-29
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       449.351
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    VCS
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6XRH
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
VCS  C05   C1   C   0  1  N  N  N  81.773  14.323  13.751   3.530   0.343  -0.145  C05   VCS   1  
VCS  C06   C2   C   0  1  Y  N  N  82.796  14.339  12.646   2.927  -1.038  -0.166  C06   VCS   2  
VCS  C07   C3   C   0  1  Y  N  N  82.571  14.987  11.428   1.523  -1.203  -0.166  C07   VCS   3  
VCS  C08   C4   C   0  1  N  N  N  81.385  15.609  11.223   0.665  -0.082  -0.143  C08   VCS   4  
VCS  C10   C5   C  -1  1  N  N  N  79.861  16.921   9.896  -1.453   0.789  -0.122  C10   VCS   5  
VCS  C11   C6   C   0  1  N  N  N  78.861  17.197  10.952  -2.834   0.756  -0.726  C11   VCS   6  
VCS  C12   C7   C   0  1  N  N  S  77.731  16.167  10.986  -3.879   0.761   0.392  C12   VCS   7  
VCS  C13   C8   C   0  1  Y  N  N  76.926  16.412  12.211  -5.270   0.882  -0.185  C13   VCS   8  
VCS  C14   C9   C   0  1  Y  N  N  75.615  16.741  11.865  -5.951  -0.269   0.190  C14   VCS   9  
VCS  C16   C10  C   0  1  N  N  N  76.668  16.386   9.895  -3.893  -0.572   1.110  C16   VCS  10  
VCS  C18   C11  C   0  1  Y  N  N  74.680  17.024  12.841  -7.276  -0.430  -0.210  C18   VCS  11  
VCS  C19   C12  C   0  1  Y  N  N  75.083  16.981  14.175  -7.894   0.544  -0.966  C19   VCS  12  
VCS  C20   C13  C   0  1  Y  N  N  76.400  16.653  14.518  -7.206   1.686  -1.334  C20   VCS  13  
VCS  C21   C14  C   0  1  Y  N  N  77.339  16.362  13.529  -5.890   1.853  -0.940  C21   VCS  14  
VCS  C22   C15  C   0  1  N  N  N  79.712  17.671   8.574  -1.035   1.905   0.603  C22   VCS  15  
VCS  C25   C16  C   0  1  Y  N  N  83.576  14.952  10.453   0.994  -2.518  -0.192  C25   VCS  16  
VCS  C27   C17  C   0  1  Y  N  N  84.776  14.298  10.717   1.847  -3.575  -0.214  C27   VCS  17  
VCS  C28   C18  C   0  1  N  N  N  85.873  14.253   9.697   1.298  -4.978  -0.242  C28   VCS  18  
VCS  C30   C19  C   0  1  Y  N  N  84.011  13.703  12.853   3.723  -2.132  -0.189  C30   VCS  19  
VCS  N09   N1   N   1  1  N  N  N  81.135  16.262  10.130  -0.635  -0.245  -0.281  N09   VCS  20  
VCS  N15   N2   N   0  1  N  N  N  75.366  16.745  10.476  -5.119  -1.097   0.945  N15   VCS  21  
VCS  N29   N3   N   1  1  Y  N  N  84.953  13.698  11.898   3.191  -3.378  -0.213  N29   VCS  22  
VCS  O01   O1   O   0  1  N  N  N  78.744  12.056  13.386   5.580   2.419  -1.265  O01   VCS  23  
VCS  O03   O2   O   0  1  N  N  N  81.046  11.351  13.589   5.748   2.315   1.252  O03   VCS  24  
VCS  O04   O3   O   0  1  N  N  N  80.553  13.791  13.294   4.955   0.240  -0.155  O04   VCS  25  
VCS  O17   O4   O   0  1  N  N  N  76.860  16.282   8.716  -2.971  -1.072   1.719  O17   VCS  26  
VCS  O23   O5   O   0  1  N  N  N  80.593  17.536   7.701  -0.380   1.761   1.622  O23   VCS  27  
VCS  O24   O6   O   0  1  N  N  N  78.716  18.404   8.390  -1.355   3.148   0.175  O24   VCS  28  
VCS  O26   O7   O  -1  1  N  N  N  83.417  15.558   9.252  -0.351  -2.720  -0.193  O26   VCS  29  
VCS  P02   P1   P   0  1  N  N  N  80.062  12.405  13.941   5.927   1.523  -0.139  P02   VCS  30  
VCS  O31   O8   O   0  1  N  N  N  80.010  12.586  15.412   7.456   1.041  -0.288  O31   VCS  31  
VCS  H052  H1   H   0  0  N  N  N  82.148  13.705  14.581   3.200   0.897  -1.024  H052  VCS  32  
VCS  H051  H2   H   0  0  N  N  N  81.608  15.351  14.105   3.210   0.866   0.756  H051  VCS  33  
VCS  H081  H3   H   0  0  N  N  N  80.627  15.560  11.991   1.075   0.908  -0.012  H081  VCS  34  
VCS  H111  H5   H   0  0  N  N  N  79.370  17.192  11.927  -2.974   1.632  -1.359  H111  VCS  35  
VCS  H112  H6   H   0  0  N  N  N  78.425  18.191  10.771  -2.947  -0.147  -1.325  H112  VCS  36  
VCS  H121  H7   H   0  0  N  N  N  78.126  15.141  10.954  -3.684   1.573   1.092  H121  VCS  37  
VCS  H181  H8   H   0  0  N  N  N  73.662  17.272  12.578  -7.821  -1.318   0.073  H181  VCS  38  
VCS  H191  H9   H   0  0  N  N  N  74.369  17.204  14.954  -8.921   0.414  -1.274  H191  VCS  39  
VCS  H201  H10  H   0  0  N  N  N  76.691  16.625  15.558  -7.694   2.446  -1.926  H201  VCS  40  
VCS  H211  H11  H   0  0  N  N  N  78.356  16.106  13.785  -5.349   2.743  -1.225  H211  VCS  41  
VCS  H281  H12  H   0  0  N  N  N  86.536  15.120   9.833   1.164  -5.295  -1.276  H281  VCS  42  
VCS  H282  H13  H   0  0  N  N  N  86.451  13.326   9.821   1.995  -5.650   0.257  H282  VCS  43  
VCS  H283  H14  H   0  0  N  N  N  85.436  14.280   8.688   0.338  -5.002   0.273  H283  VCS  44  
VCS  H301  H15  H   0  0  N  N  N  84.201  13.206  13.793   4.796  -2.010  -0.193  H301  VCS  45  
VCS  H151  H16  H   0  0  N  N  N  74.509  16.944  10.001  -5.394  -1.952   1.309  H151  VCS  46  
VCS  H2    H17  H   0  1  N  N  N  80.617  10.674  13.080   5.958   1.787   2.034  H2    VCS  47  
VCS  H3    H18  H   0  1  N  N  N  78.768  18.798   7.527  -1.022   3.857   0.742  H3    VCS  48  
VCS  H5    H20  H   0  1  N  N  N  79.123  12.440  15.718   8.098   1.764  -0.286  H5    VCS  49  
VCS  H091  H21  H   0  0  N  N  N  81.842  16.314   9.425  -0.994  -1.119  -0.498  H091  VCS  50  
VCS  H291  H22  H   0  0  N  N  N  85.818  13.229  12.076   3.783  -4.146  -0.229  H291  VCS  51  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
VCS  O23  C22   DOUB  N  N   1  
VCS  O24  C22   SING  N  N   2  
VCS  C22  C10   SING  N  N   3  
VCS  O17  C16   DOUB  N  N   4  
VCS  O26  C25   SING  N  N   5  
VCS  C28  C27   SING  N  N   6  
VCS  C16  N15   SING  N  N   7  
VCS  C16  C12   SING  N  N   8  
VCS  C10  N09   SING  N  N   9  
VCS  C10  C11   SING  N  N  10  
VCS  N09  C08   DOUB  N  N  11  
VCS  C25  C27   DOUB  Y  N  12  
VCS  C25  C07   SING  Y  N  13  
VCS  N15  C14   SING  N  N  14  
VCS  C27  N29   SING  Y  N  15  
VCS  C11  C12   SING  N  N  16  
VCS  C12  C13   SING  N  N  17  
VCS  C08  C07   SING  N  N  18  
VCS  C07  C06   DOUB  Y  N  19  
VCS  C14  C13   DOUB  Y  N  20  
VCS  C14  C18   SING  Y  N  21  
VCS  N29  C30   DOUB  Y  N  22  
VCS  C13  C21   SING  Y  N  23  
VCS  C06  C30   SING  Y  N  24  
VCS  C06  C05   SING  N  N  25  
VCS  C18  C19   DOUB  Y  N  26  
VCS  O04  C05   SING  N  N  27  
VCS  O04  P02   SING  N  N  28  
VCS  O01  P02   DOUB  N  N  29  
VCS  C21  C20   DOUB  Y  N  30  
VCS  O03  P02   SING  N  N  31  
VCS  P02  O31   SING  N  N  32  
VCS  C19  C20   SING  Y  N  33  
VCS  C05  H052  SING  N  N  34  
VCS  C05  H051  SING  N  N  35  
VCS  C08  H081  SING  N  N  36  
VCS  C11  H111  SING  N  N  37  
VCS  C11  H112  SING  N  N  38  
VCS  C12  H121  SING  N  N  39  
VCS  C18  H181  SING  N  N  40  
VCS  C19  H191  SING  N  N  41  
VCS  C20  H201  SING  N  N  42  
VCS  C21  H211  SING  N  N  43  
VCS  C28  H281  SING  N  N  44  
VCS  C28  H282  SING  N  N  45  
VCS  C28  H283  SING  N  N  46  
VCS  C30  H301  SING  N  N  47  
VCS  N15  H151  SING  N  N  48  
VCS  O03  H2    SING  N  N  49  
VCS  O24  H3    SING  N  N  50  
VCS  O31  H5    SING  N  N  51  
VCS  N09  H091  SING  N  N  52  
VCS  N29  H291  SING  N  N  53  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
VCS  SMILES            ACDLabs               12.01  "C(c1c[nH+]c(c(c1[C@H]=[NH+][C-](CC3c2ccccc2NC3=O)C(=O)O)[O-])C)OP(=O)(O)O"  
VCS  InChI             InChI                 1.03   "InChI=1S/C19H20N3O8P/c1-10-17(23)14(11(7-20-10)9-30-31(27,28)29)8-21-16(19(25)26)6-13-12-4-2-3-5-15(12)22-18(13)24/h2-5,7-8,13,21,23H,6,9H2,1H3,(H,22,24)(H,25,26)(H2,27,28,29)/b21-8+/t13-/m0/s1"  
VCS  InChIKey          InChI                 1.03   QWYZKAZTPCEUQJ-OOMAIKSQSA-N  
VCS  SMILES_CANONICAL  CACTVS                3.385  "Cc1[nH+]cc(CO[P](O)(O)=O)c(C=[NH+][C-](C[C@@H]2C(=O)Nc3ccccc23)C(O)=O)c1[O-]"  
VCS  SMILES            CACTVS                3.385  "Cc1[nH+]cc(CO[P](O)(O)=O)c(C=[NH+][C-](C[CH]2C(=O)Nc3ccccc23)C(O)=O)c1[O-]"  
VCS  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1c(c(c(c[nH+]1)COP(=O)(O)O)/C=[NH+]/[C-](C[C@H]2c3ccccc3NC2=O)C(=O)O)[O-]"  
VCS  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1c(c(c(c[nH+]1)COP(=O)(O)O)C=[NH+][C-](CC2c3ccccc3NC2=O)C(=O)O)[O-]"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
VCS  "SYSTEMATIC NAME"  ACDLabs               12.01  "4-[(E)-({1-carboxy-2-[(3S)-2-oxo-2,3-dihydro-1H-indol-3-yl]ethan-1-id-1-yl}iminio)methyl]-2-methyl-5-[(phosphonooxy)methyl]pyridin-1-ium-3-olate"  
VCS  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "2-methyl-4-[(~{E})-[1-oxidanyl-1-oxidanylidene-3-[(3~{S})-2-oxidanylidene-1,3-dihydroindol-3-yl]propan-2-yl]azaniumylidenemethyl]-5-(phosphonooxymethyl)pyridin-1-ium-3-olate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
VCS  "Create component"  2020-07-29  RCSB  
VCS  "Initial release"   2021-02-03  RCSB  
##
