data_ZGS
#

_chem_comp.id                                   ZGS
_chem_comp.name                                 "[(2~{R})-2-oxidanyl-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propyl] (9~{Z},12~{Z},15~{Z})-octadeca-9,12,15-trienoate"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C26 H49 N O7 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "LysoPC(18:3(9Z,12Z,15Z))"
_chem_comp.pdbx_formal_charge                   1
_chem_comp.pdbx_initial_date                    2021-04-21
_chem_comp.pdbx_modified_date                   2021-06-11
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       518.644
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    ZGS
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7MJS
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ZGS  C01  C1   C  0  1  N  N  N  137.666  151.068  180.437  -13.076   4.658   2.211  C01  ZGS   1  
ZGS  C02  C2   C  0  1  N  N  N  138.527  151.423  181.664  -13.470   3.468   1.335  C02  ZGS   2  
ZGS  C03  C3   C  0  1  N  N  N  139.896  150.804  181.498  -13.008   3.710  -0.079  C03  ZGS   3  
ZGS  C04  C4   C  0  1  N  N  N  140.777  150.752  182.512  -12.296   2.802  -0.699  C04  ZGS   4  
ZGS  C05  C5   C  0  1  N  N  N  140.463  151.323  183.919  -12.070   1.455  -0.061  C05  ZGS   5  
ZGS  C06  C6   C  0  1  N  N  N  140.534  150.161  184.950  -12.484   0.369  -1.020  C06  ZGS   6  
ZGS  C07  C7   C  0  1  N  N  N  141.625  149.985  185.745  -11.657  -0.608  -1.299  C07  ZGS   7  
ZGS  C08  C8   C  0  1  N  N  N  142.845  150.928  185.662  -10.356  -0.732  -0.550  C08  ZGS   8  
ZGS  C09  C9   C  0  1  N  N  N  142.651  152.134  186.613  -10.241  -2.118   0.031  C09  ZGS   9  
ZGS  C10  C10  C  0  1  N  N  N  143.017  152.054  187.917   -9.175  -2.841  -0.207  C10  ZGS  10  
ZGS  C11  C11  C  0  1  N  N  N  143.636  150.754  188.496   -7.992  -2.230  -0.912  C11  ZGS  11  
ZGS  C12  C12  C  0  1  N  N  N  144.262  151.063  189.902   -6.728  -2.463  -0.082  C12  ZGS  12  
ZGS  C13  C13  C  0  1  N  N  N  143.499  150.343  191.042   -5.526  -1.843  -0.797  C13  ZGS  13  
ZGS  C14  C14  C  0  1  N  N  N  144.207  150.487  192.413   -4.262  -2.075   0.033  C14  ZGS  14  
ZGS  C15  C15  C  0  1  N  N  N  143.206  150.799  193.569   -3.061  -1.455  -0.683  C15  ZGS  15  
ZGS  C16  C16  C  0  1  N  N  N  142.081  151.772  193.137   -1.797  -1.688   0.148  C16  ZGS  16  
ZGS  C17  C17  C  0  1  N  N  N  142.512  153.251  193.275   -0.595  -1.067  -0.568  C17  ZGS  17  
ZGS  C18  C18  C  0  1  N  N  N  141.334  154.199  193.604    0.650  -1.297   0.250  C18  ZGS  18  
ZGS  C21  C19  C  0  1  N  N  N  140.401  155.684  195.191    2.990  -1.094   0.653  C21  ZGS  19  
ZGS  C22  C20  C  0  1  N  N  R  141.434  156.481  196.001    4.238  -0.498  -0.002  C22  ZGS  20  
ZGS  C23  C21  C  0  1  N  N  N  140.744  157.649  196.733    5.473  -0.876   0.817  C23  ZGS  21  
ZGS  C29  C22  C  0  1  N  N  N  140.632  160.652  199.215   10.593   0.181   0.083  C29  ZGS  22  
ZGS  C30  C23  C  0  1  N  N  N  140.543  161.797  200.247   11.314   0.963  -1.017  C30  ZGS  23  
ZGS  C32  C24  C  0  1  N  N  N  138.412  161.020  200.983   11.330   2.964   0.307  C32  ZGS  24  
ZGS  C33  C25  C  0  1  N  N  N  140.360  160.261  202.085   11.519   3.103  -2.081  C33  ZGS  25  
ZGS  C34  C26  C  0  1  N  N  N  139.637  162.503  202.349    9.438   2.457  -1.078  C34  ZGS  26  
ZGS  N31  N1   N  1  1  N  N  N  139.735  161.392  201.416   10.900   2.372  -0.967  N31  ZGS  27  
ZGS  O19  O1   O  0  1  N  N  N  140.755  154.762  192.737    0.583  -1.895   1.297  O19  ZGS  28  
ZGS  O20  O2   O  0  1  N  N  N  140.953  154.401  194.953    1.833  -0.836  -0.186  O20  ZGS  29  
ZGS  O24  O3   O  0  1  N  N  N  141.674  158.723  196.814    6.649  -0.421   0.145  O24  ZGS  30  
ZGS  O26  O4   O  0  1  N  N  N  141.841  160.967  195.493    8.217  -0.098   2.095  O26  ZGS  31  
ZGS  O27  O5   O  0  1  N  N  N  139.623  160.235  196.299    8.464  -2.222   0.754  O27  ZGS  32  
ZGS  O28  O6   O  0  1  N  N  N  141.324  161.121  198.059    9.198   0.106  -0.221  O28  ZGS  33  
ZGS  O35  O7   O  0  1  N  N  N  142.390  156.989  195.128    4.116   0.924  -0.053  O35  ZGS  34  
ZGS  P25  P1   P  0  1  N  N  N  141.102  160.282  196.627    8.134  -0.647   0.723  P25  ZGS  35  
ZGS  H1   H1   H  0  1  N  N  N  136.667  151.514  180.548  -13.543   5.564   1.826  H1   ZGS  36  
ZGS  H2   H2   H  0  1  N  N  N  138.144  151.461  179.528  -13.410   4.483   3.234  H2   ZGS  37  
ZGS  H3   H3   H  0  1  N  N  N  137.573  149.975  180.359  -11.992   4.775   2.199  H3   ZGS  38  
ZGS  H4   H4   H  0  1  N  N  N  138.623  152.516  181.744  -13.003   2.562   1.720  H4   ZGS  39  
ZGS  H5   H5   H  0  1  N  N  N  138.052  151.029  182.575  -14.554   3.351   1.347  H5   ZGS  40  
ZGS  H6   H6   H  0  1  N  N  N  140.174  150.392  180.539  -13.263   4.632  -0.580  H6   ZGS  41  
ZGS  H7   H7   H  0  1  N  N  N  141.740  150.295  182.340  -11.871   3.018  -1.668  H7   ZGS  42  
ZGS  H8   H8   H  0  1  N  N  N  141.201  152.096  184.179  -11.014   1.341   0.183  H8   ZGS  43  
ZGS  H9   H9   H  0  1  N  N  N  139.455  151.763  183.924  -12.663   1.381   0.850  H9   ZGS  44  
ZGS  H10  H10  H  0  1  N  N  N  139.701  149.480  185.037  -13.462   0.396  -1.476  H10  ZGS  45  
ZGS  H11  H11  H  0  1  N  N  N  141.638  149.167  186.450  -11.908  -1.324  -2.068  H11  ZGS  46  
ZGS  H12  H12  H  0  1  N  N  N  143.751  150.377  185.954   -9.525  -0.554  -1.232  H12  ZGS  47  
ZGS  H13  H13  H  0  1  N  N  N  142.954  151.292  184.630  -10.329   0.003   0.255  H13  ZGS  48  
ZGS  H14  H14  H  0  1  N  N  N  142.220  153.049  186.234  -11.037  -2.514   0.644  H14  ZGS  49  
ZGS  H15  H15  H  0  1  N  N  N  142.875  152.908  188.562   -9.145  -3.876   0.102  H15  ZGS  50  
ZGS  H16  H16  H  0  1  N  N  N  142.853  149.989  188.602   -7.873  -2.693  -1.891  H16  ZGS  51  
ZGS  H17  H17  H  0  1  N  N  N  144.419  150.385  187.817   -8.155  -1.159  -1.034  H17  ZGS  52  
ZGS  H18  H18  H  0  1  N  N  N  145.309  150.727  189.907   -6.846  -2.000   0.898  H18  ZGS  53  
ZGS  H19  H19  H  0  1  N  N  N  144.224  152.148  190.078   -6.565  -3.534   0.040  H19  ZGS  54  
ZGS  H20  H20  H  0  1  N  N  N  142.490  150.775  191.119   -5.408  -2.306  -1.777  H20  ZGS  55  
ZGS  H21  H21  H  0  1  N  N  N  143.423  149.274  190.795   -5.689  -0.772  -0.919  H21  ZGS  56  
ZGS  H22  H22  H  0  1  N  N  N  144.729  149.546  192.642   -4.381  -1.612   1.013  H22  ZGS  57  
ZGS  H23  H23  H  0  1  N  N  N  144.939  151.306  192.349   -4.100  -3.146   0.155  H23  ZGS  58  
ZGS  H24  H24  H  0  1  N  N  N  142.748  149.856  193.902   -2.942  -1.918  -1.662  H24  ZGS  59  
ZGS  H25  H25  H  0  1  N  N  N  143.762  151.251  194.404   -3.223  -0.384  -0.804  H25  ZGS  60  
ZGS  H26  H26  H  0  1  N  N  N  141.198  151.598  193.770   -1.915  -1.225   1.127  H26  ZGS  61  
ZGS  H27  H27  H  0  1  N  N  N  141.823  151.573  192.086   -1.634  -2.759   0.269  H27  ZGS  62  
ZGS  H28  H28  H  0  1  N  N  N  143.256  153.325  194.081   -0.477  -1.531  -1.548  H28  ZGS  63  
ZGS  H29  H29  H  0  1  N  N  N  142.966  153.573  192.326   -0.758   0.004  -0.690  H29  ZGS  64  
ZGS  H30  H30  H  0  1  N  N  N  140.199  156.190  194.236    3.120  -2.169   0.773  H30  ZGS  65  
ZGS  H31  H31  H  0  1  N  N  N  139.465  155.591  195.762    2.839  -0.635   1.631  H31  ZGS  66  
ZGS  H32  H32  H  0  1  N  N  N  141.894  155.816  196.746    4.339  -0.891  -1.014  H32  ZGS  67  
ZGS  H33  H33  H  0  1  N  N  N  139.853  157.967  196.172    5.414  -0.410   1.801  H33  ZGS  68  
ZGS  H34  H34  H  0  1  N  N  N  140.448  157.334  197.744    5.517  -1.959   0.931  H34  ZGS  69  
ZGS  H35  H35  H  0  1  N  N  N  139.619  160.330  198.933   11.006  -0.826   0.144  H35  ZGS  70  
ZGS  H36  H36  H  0  1  N  N  N  141.178  159.803  199.652   10.729   0.688   1.038  H36  ZGS  71  
ZGS  H37  H37  H  0  1  N  N  N  141.557  162.058  200.583   12.391   0.895  -0.865  H37  ZGS  72  
ZGS  H38  H38  H  0  1  N  N  N  140.077  162.673  199.773   11.057   0.543  -1.989  H38  ZGS  73  
ZGS  H39  H39  H  0  1  N  N  N  137.812  160.719  201.854   12.415   2.900   0.389  H39  ZGS  74  
ZGS  H40  H40  H  0  1  N  N  N  137.934  161.878  200.487   11.023   4.009   0.343  H40  ZGS  75  
ZGS  H41  H41  H  0  1  N  N  N  138.480  160.180  200.277   10.871   2.421   1.133  H41  ZGS  76  
ZGS  H42  H42  H  0  1  N  N  N  139.752  159.966  202.953   11.200   2.664  -3.026  H42  ZGS  77  
ZGS  H43  H43  H  0  1  N  N  N  140.433  159.416  201.385   11.213   4.148  -2.044  H43  ZGS  78  
ZGS  H44  H44  H  0  1  N  N  N  141.368  160.546  202.422   12.604   3.040  -1.998  H44  ZGS  79  
ZGS  H45  H45  H  0  1  N  N  N  139.035  162.200  203.219    8.982   2.090  -0.159  H45  ZGS  80  
ZGS  H46  H46  H  0  1  N  N  N  140.645  162.791  202.683    9.146   3.495  -1.240  H46  ZGS  81  
ZGS  H47  H47  H  0  1  N  N  N  139.157  163.358  201.851    9.101   1.850  -1.919  H47  ZGS  82  
ZGS  H48  H48  H  0  1  N  N  N  139.472  160.644  195.455    8.427  -2.649  -0.113  H48  ZGS  83  
ZGS  H49  H49  H  0  1  N  N  N  143.035  157.485  195.618    4.023   1.342   0.814  H49  ZGS  84  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ZGS  C01  C02  SING  N  N   1  
ZGS  C03  C02  SING  N  N   2  
ZGS  C03  C04  DOUB  N  Z   3  
ZGS  C04  C05  SING  N  N   4  
ZGS  C05  C06  SING  N  N   5  
ZGS  C06  C07  DOUB  N  Z   6  
ZGS  C08  C07  SING  N  N   7  
ZGS  C08  C09  SING  N  N   8  
ZGS  C09  C10  DOUB  N  Z   9  
ZGS  C10  C11  SING  N  N  10  
ZGS  C11  C12  SING  N  N  11  
ZGS  C12  C13  SING  N  N  12  
ZGS  C13  C14  SING  N  N  13  
ZGS  C14  C15  SING  N  N  14  
ZGS  O19  C18  DOUB  N  N  15  
ZGS  C16  C17  SING  N  N  16  
ZGS  C16  C15  SING  N  N  17  
ZGS  C17  C18  SING  N  N  18  
ZGS  C18  O20  SING  N  N  19  
ZGS  O20  C21  SING  N  N  20  
ZGS  O35  C22  SING  N  N  21  
ZGS  C21  C22  SING  N  N  22  
ZGS  O26  P25  DOUB  N  N  23  
ZGS  C22  C23  SING  N  N  24  
ZGS  O27  P25  SING  N  N  25  
ZGS  P25  O24  SING  N  N  26  
ZGS  P25  O28  SING  N  N  27  
ZGS  C23  O24  SING  N  N  28  
ZGS  O28  C29  SING  N  N  29  
ZGS  C29  C30  SING  N  N  30  
ZGS  C30  N31  SING  N  N  31  
ZGS  C32  N31  SING  N  N  32  
ZGS  N31  C33  SING  N  N  33  
ZGS  N31  C34  SING  N  N  34  
ZGS  C01  H1   SING  N  N  35  
ZGS  C01  H2   SING  N  N  36  
ZGS  C01  H3   SING  N  N  37  
ZGS  C02  H4   SING  N  N  38  
ZGS  C02  H5   SING  N  N  39  
ZGS  C03  H6   SING  N  N  40  
ZGS  C04  H7   SING  N  N  41  
ZGS  C05  H8   SING  N  N  42  
ZGS  C05  H9   SING  N  N  43  
ZGS  C06  H10  SING  N  N  44  
ZGS  C07  H11  SING  N  N  45  
ZGS  C08  H12  SING  N  N  46  
ZGS  C08  H13  SING  N  N  47  
ZGS  C09  H14  SING  N  N  48  
ZGS  C10  H15  SING  N  N  49  
ZGS  C11  H16  SING  N  N  50  
ZGS  C11  H17  SING  N  N  51  
ZGS  C12  H18  SING  N  N  52  
ZGS  C12  H19  SING  N  N  53  
ZGS  C13  H20  SING  N  N  54  
ZGS  C13  H21  SING  N  N  55  
ZGS  C14  H22  SING  N  N  56  
ZGS  C14  H23  SING  N  N  57  
ZGS  C15  H24  SING  N  N  58  
ZGS  C15  H25  SING  N  N  59  
ZGS  C16  H26  SING  N  N  60  
ZGS  C16  H27  SING  N  N  61  
ZGS  C17  H28  SING  N  N  62  
ZGS  C17  H29  SING  N  N  63  
ZGS  C21  H30  SING  N  N  64  
ZGS  C21  H31  SING  N  N  65  
ZGS  C22  H32  SING  N  N  66  
ZGS  C23  H33  SING  N  N  67  
ZGS  C23  H34  SING  N  N  68  
ZGS  C29  H35  SING  N  N  69  
ZGS  C29  H36  SING  N  N  70  
ZGS  C30  H37  SING  N  N  71  
ZGS  C30  H38  SING  N  N  72  
ZGS  C32  H39  SING  N  N  73  
ZGS  C32  H40  SING  N  N  74  
ZGS  C32  H41  SING  N  N  75  
ZGS  C33  H42  SING  N  N  76  
ZGS  C33  H43  SING  N  N  77  
ZGS  C33  H44  SING  N  N  78  
ZGS  C34  H45  SING  N  N  79  
ZGS  C34  H46  SING  N  N  80  
ZGS  C34  H47  SING  N  N  81  
ZGS  O27  H48  SING  N  N  82  
ZGS  O35  H49  SING  N  N  83  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ZGS  SMILES            ACDLabs               12.01  "C[N+](C)(C)CCOP(O)(=O)OCC(O)COC(=O)CCCCCCC/C=C\C/C=C\C/C=C\CC"  
ZGS  InChI             InChI                 1.03   "InChI=1S/C26H48NO7P/c1-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-26(29)32-23-25(28)24-34-35(30,31)33-22-21-27(2,3)4/h6-7,9-10,12-13,25,28H,5,8,11,14-24H2,1-4H3/p+1/b7-6-,10-9-,13-12-/t25-/m1/s1"  
ZGS  InChIKey          InChI                 1.03   WKQNRCYKYCKESD-YVHLTTHBSA-O  
ZGS  SMILES_CANONICAL  CACTVS                3.385  "CC\C=C/C/C=C\C\C=C/CCCCCCCC(=O)OC[C@@H](O)CO[P](O)(=O)OCC[N+](C)(C)C"  
ZGS  SMILES            CACTVS                3.385  "CCC=CCC=CCC=CCCCCCCCC(=O)OC[CH](O)CO[P](O)(=O)OCC[N+](C)(C)C"  
ZGS  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC/C=C\C/C=C\C/C=C\CCCCCCCC(=O)OC[C@H](COP(=O)(O)OCC[N+](C)(C)C)O"  
ZGS  SMILES            "OpenEye OEToolkits"  2.0.7  "CCC=CCC=CCC=CCCCCCCCC(=O)OCC(COP(=O)(O)OCC[N+](C)(C)C)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
ZGS  "SYSTEMATIC NAME"  ACDLabs               12.01  "(4S,7R,18Z,21Z,24Z)-4,7-dihydroxy-N,N,N-trimethyl-4,10-dioxo-3,5,9-trioxa-4lambda~5~-phosphaheptacosa-18,21,24-trien-1-aminium"  
ZGS  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "trimethyl-[2-[[(2~{R})-3-[(9~{Z},12~{Z},15~{Z})-octadeca-9,12,15-trienoyl]oxy-2-oxidanyl-propoxy]-oxidanyl-phosphoryl]oxyethyl]azanium"  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     ZGS
_pdbx_chem_comp_synonyms.name        "LysoPC(18:3(9Z,12Z,15Z))"
_pdbx_chem_comp_synonyms.provenance  AUTHOR
_pdbx_chem_comp_synonyms.type        ?
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ZGS  "Create component"  2021-04-21  RCSB  
ZGS  "Initial release"   2021-06-16  RCSB  
##
