data_5VT
# 
_chem_comp.id                                    5VT 
_chem_comp.name                                  "(2~{S})-~{N}2-[2-(4-methoxyphenyl)ethyl]-~{N}1-(naphthalen-1-ylmethyl)pyrrolidine-1,2-dicarboxamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C26 H29 N3 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-12-12 
_chem_comp.pdbx_modified_date                    2016-10-21 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        431.527 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5VT 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5FAH 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5VT C2  C1  C 0 1 N N N 14.520 14.051 40.629 -3.470  -0.756 -0.168 C2  5VT 1  
5VT C3  C2  C 0 1 N N N 15.875 13.103 38.818 -1.160  -1.470 0.135  C3  5VT 2  
5VT C13 C3  C 0 1 N N N 15.801 12.630 33.456 3.199   1.278  -0.008 C13 5VT 3  
5VT C14 C4  C 0 1 Y N N 15.703 14.055 32.879 4.610   1.529  0.455  C14 5VT 4  
5VT C15 C5  C 0 1 Y N N 15.550 16.657 31.791 7.215   2.011  1.348  C15 5VT 5  
5VT C16 C6  C 0 1 Y N N 16.069 16.460 33.072 6.139   2.403  2.082  C16 5VT 6  
5VT C17 C7  C 0 1 Y N N 16.163 15.156 33.614 4.840   2.163  1.637  C17 5VT 7  
5VT C18 C8  C 0 1 Y N N 15.119 15.551 31.025 7.018   1.348  0.124  C18 5VT 8  
5VT C19 C9  C 0 1 Y N N 15.186 14.238 31.582 5.697   1.103  -0.328 C19 5VT 9  
5VT C20 C10 C 0 1 Y N N 14.703 13.182 30.790 5.500   0.440  -1.551 C20 5VT 10 
5VT C21 C11 C 0 1 Y N N 14.147 13.395 29.523 6.576   0.043  -2.283 C21 5VT 11 
5VT C22 C12 C 0 1 Y N N 14.095 14.690 29.004 7.874   0.283  -1.838 C22 5VT 12 
5VT C23 C13 C 0 1 Y N N 14.542 15.769 29.762 8.104   0.922  -0.659 C23 5VT 13 
5VT C24 C14 C 0 1 N N N 15.534 14.693 41.600 -4.744  -1.275 -0.839 C24 5VT 14 
5VT C25 C15 C 0 1 Y N N 14.917 15.963 42.195 -5.861  -0.285 -0.629 C25 5VT 15 
5VT C26 C16 C 0 1 Y N N 15.137 17.213 41.607 -6.675  -0.389 0.484  C26 5VT 16 
5VT C27 C17 C 0 1 Y N N 13.711 18.257 43.296 -7.911  1.531  -0.244 C27 5VT 17 
5VT C28 C18 C 0 1 Y N N 13.487 17.005 43.880 -7.090  1.636  -1.357 C28 5VT 18 
5VT C29 C19 C 0 1 Y N N 14.536 18.366 42.160 -7.700  0.517  0.678  C29 5VT 19 
5VT C30 C20 C 0 1 Y N N 14.091 15.868 43.317 -6.066  0.728  -1.547 C30 5VT 20 
5VT N1  N1  N 0 1 N N N 15.130 12.937 39.894 -2.384  -1.718 -0.371 N1  5VT 21 
5VT C4  C21 C 0 1 N N S 16.475 11.850 38.227 -0.043  -2.459 -0.074 C4  5VT 22 
5VT N5  N2  N 0 1 N N N 16.979 12.073 36.888 1.258   -1.836 0.229  N5  5VT 23 
5VT C6  C22 C 0 1 N N N 17.743 11.408 39.003 -0.165  -3.631 0.931  C6  5VT 24 
5VT C7  C23 C 0 1 N N N 18.390 11.731 36.729 2.121   -2.836 0.875  C7  5VT 25 
5VT C8  C24 C 0 1 N N N 18.644 10.794 37.933 1.300   -4.137 1.000  C8  5VT 26 
5VT O9  O1  O 0 1 N N N 16.075 14.228 38.317 -0.958  -0.450 0.760  O9  5VT 27 
5VT C10 C25 C 0 1 N N N 16.093 12.282 35.871 1.600   -0.561 -0.042 C10 5VT 28 
5VT O11 O2  O 0 1 N N N 14.872 12.233 36.060 0.803   0.181  -0.582 O11 5VT 29 
5VT N12 N3  N 0 1 N N N 16.616 12.504 34.650 2.827   -0.108 0.286  N12 5VT 30 
5VT O31 O3  O 0 1 N N N 13.100 19.403 43.860 -8.919  2.423  -0.055 O31 5VT 31 
5VT C32 C26 C 0 1 N N N 12.388 19.421 45.112 -9.725  2.254  1.113  C32 5VT 32 
5VT H1  H1  H 0 1 N N N 14.178 14.811 39.911 -3.193  0.203  -0.606 H1  5VT 33 
5VT H2  H2  H 0 1 N N N 13.660 13.675 41.203 -3.648  -0.630 0.900  H2  5VT 34 
5VT H3  H3  H 0 1 N N N 14.784 12.291 33.701 2.520   1.955  0.512  H3  5VT 35 
5VT H4  H4  H 0 1 N N N 16.229 11.977 32.681 3.132   1.452  -1.082 H4  5VT 36 
5VT H5  H5  H 0 1 N N N 15.478 17.655 31.385 8.216   2.204  1.705  H5  5VT 37 
5VT H6  H6  H 0 1 N N N 16.401 17.308 33.653 6.293   2.912  3.022  H6  5VT 38 
5VT H7  H7  H 0 1 N N N 16.590 15.009 34.595 4.003   2.485  2.239  H7  5VT 39 
5VT H8  H8  H 0 1 N N N 14.763 12.173 31.171 4.499   0.247  -1.908 H8  5VT 40 
5VT H9  H9  H 0 1 N N N 13.761 12.564 28.951 6.422   -0.467 -3.223 H9  5VT 41 
5VT H10 H10 H 0 1 N N N 13.706 14.856 28.010 8.711   -0.043 -2.438 H10 5VT 42 
5VT H11 H11 H 0 1 N N N 14.445 16.774 29.379 9.116   1.101  -0.326 H11 5VT 43 
5VT H12 H12 H 0 1 N N N 15.771 13.985 42.407 -4.566  -1.401 -1.906 H12 5VT 44 
5VT H13 H13 H 0 1 N N N 16.455 14.950 41.056 -5.021  -2.234 -0.400 H13 5VT 45 
5VT H14 H14 H 0 1 N N N 15.765 17.297 40.732 -6.510  -1.179 1.202  H14 5VT 46 
5VT H15 H15 H 0 1 N N N 12.858 16.914 44.753 -7.250  2.428  -2.074 H15 5VT 47 
5VT H16 H16 H 0 1 N N N 14.710 19.333 41.711 -8.335  0.435  1.548  H16 5VT 48 
5VT H17 H17 H 0 1 N N N 13.913 14.900 43.761 -5.426  0.810  -2.413 H17 5VT 49 
5VT H18 H18 H 0 1 N N N 14.973 12.006 40.225 -2.546  -2.534 -0.871 H18 5VT 50 
5VT H19 H19 H 0 1 N N N 15.735 11.036 38.238 -0.057  -2.834 -1.097 H19 5VT 51 
5VT H20 H20 H 0 1 N N N 17.489 10.664 39.773 -0.502  -3.277 1.906  H20 5VT 52 
5VT H21 H21 H 0 1 N N N 18.232 12.273 39.475 -0.829  -4.406 0.549  H21 5VT 53 
5VT H22 H22 H 0 1 N N N 18.568 11.211 35.776 3.005   -3.013 0.263  H22 5VT 54 
5VT H23 H23 H 0 1 N N N 19.025 12.628 36.782 2.416   -2.487 1.865  H23 5VT 55 
5VT H24 H24 H 0 1 N N N 18.347 9.760  37.705 1.495   -4.626 1.954  H24 5VT 56 
5VT H25 H25 H 0 1 N N N 19.700 10.813 38.240 1.515   -4.810 0.170  H25 5VT 57 
5VT H26 H26 H 0 1 N N N 17.609 12.586 34.562 3.463   -0.700 0.717  H26 5VT 58 
5VT H27 H27 H 0 1 N N N 12.017 20.438 45.309 -10.203 1.275  1.086  H27 5VT 59 
5VT H28 H28 H 0 1 N N N 11.538 18.725 45.060 -9.098  2.328  2.001  H28 5VT 60 
5VT H29 H29 H 0 1 N N N 13.065 19.114 45.923 -10.490 3.030  1.142  H29 5VT 61 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5VT C22 C21 DOUB Y N 1  
5VT C22 C23 SING Y N 2  
5VT C21 C20 SING Y N 3  
5VT C23 C18 DOUB Y N 4  
5VT C20 C19 DOUB Y N 5  
5VT C18 C19 SING Y N 6  
5VT C18 C15 SING Y N 7  
5VT C19 C14 SING Y N 8  
5VT C15 C16 DOUB Y N 9  
5VT C14 C13 SING N N 10 
5VT C14 C17 DOUB Y N 11 
5VT C16 C17 SING Y N 12 
5VT C13 N12 SING N N 13 
5VT N12 C10 SING N N 14 
5VT C10 O11 DOUB N N 15 
5VT C10 N5  SING N N 16 
5VT C7  N5  SING N N 17 
5VT C7  C8  SING N N 18 
5VT N5  C4  SING N N 19 
5VT C8  C6  SING N N 20 
5VT C4  C3  SING N N 21 
5VT C4  C6  SING N N 22 
5VT O9  C3  DOUB N N 23 
5VT C3  N1  SING N N 24 
5VT N1  C2  SING N N 25 
5VT C2  C24 SING N N 26 
5VT C24 C25 SING N N 27 
5VT C26 C29 DOUB Y N 28 
5VT C26 C25 SING Y N 29 
5VT C29 C27 SING Y N 30 
5VT C25 C30 DOUB Y N 31 
5VT C27 O31 SING N N 32 
5VT C27 C28 DOUB Y N 33 
5VT C30 C28 SING Y N 34 
5VT O31 C32 SING N N 35 
5VT C2  H1  SING N N 36 
5VT C2  H2  SING N N 37 
5VT C13 H3  SING N N 38 
5VT C13 H4  SING N N 39 
5VT C15 H5  SING N N 40 
5VT C16 H6  SING N N 41 
5VT C17 H7  SING N N 42 
5VT C20 H8  SING N N 43 
5VT C21 H9  SING N N 44 
5VT C22 H10 SING N N 45 
5VT C23 H11 SING N N 46 
5VT C24 H12 SING N N 47 
5VT C24 H13 SING N N 48 
5VT C26 H14 SING N N 49 
5VT C28 H15 SING N N 50 
5VT C29 H16 SING N N 51 
5VT C30 H17 SING N N 52 
5VT N1  H18 SING N N 53 
5VT C4  H19 SING N N 54 
5VT C6  H20 SING N N 55 
5VT C6  H21 SING N N 56 
5VT C7  H22 SING N N 57 
5VT C7  H23 SING N N 58 
5VT C8  H24 SING N N 59 
5VT C8  H25 SING N N 60 
5VT N12 H26 SING N N 61 
5VT C32 H27 SING N N 62 
5VT C32 H28 SING N N 63 
5VT C32 H29 SING N N 64 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5VT InChI            InChI                1.03  "InChI=1S/C26H29N3O3/c1-32-22-13-11-19(12-14-22)15-16-27-25(30)24-10-5-17-29(24)26(31)28-18-21-8-4-7-20-6-2-3-9-23(20)21/h2-4,6-9,11-14,24H,5,10,15-18H2,1H3,(H,27,30)(H,28,31)/t24-/m0/s1" 
5VT InChIKey         InChI                1.03  HMNBKWNEJGMBRQ-DEOSSOPVSA-N                                                                                                                                                                 
5VT SMILES_CANONICAL CACTVS               3.385 "COc1ccc(CCNC(=O)[C@@H]2CCCN2C(=O)NCc3cccc4ccccc34)cc1"                                                                                                                                     
5VT SMILES           CACTVS               3.385 "COc1ccc(CCNC(=O)[CH]2CCCN2C(=O)NCc3cccc4ccccc34)cc1"                                                                                                                                       
5VT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "COc1ccc(cc1)CCNC(=O)[C@@H]2CCCN2C(=O)NCc3cccc4c3cccc4"                                                                                                                                     
5VT SMILES           "OpenEye OEToolkits" 2.0.4 "COc1ccc(cc1)CCNC(=O)C2CCCN2C(=O)NCc3cccc4c3cccc4"                                                                                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
5VT "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "(2~{S})-~{N}2-[2-(4-methoxyphenyl)ethyl]-~{N}1-(naphthalen-1-ylmethyl)pyrrolidine-1,2-dicarboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5VT "Create component" 2015-12-12 EBI  
5VT "Initial release"  2016-10-26 RCSB 
# 
